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Query: [I] KOG1206 Peroxisomal multifunctional beta-oxidation protein and related enzymes, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPGNLSFKDRVVVITGAGGGLGKVYALAYASRGAKVVVNDLGGTLGGSGHNSKAADLVVDEIKKAGGIAVANYDSVNENGEKIIETAIKEFGRVDVLINNAGILRDVSFAKMTEREFASVVDVHLTGGYKLSRAAWPYMRSQKFGRIINTASPAGLFGNFGQANYSAAKMGLVGLAETLAKEGAKYNINVNSIAPLARSRMTENVLPPHILKQLGPEKIVPLVLYLTHESTKVSNSIFELAAGFFGQLRWERSSGQIFNPDPKTYTPEAILNKWKEITDYRDKPFNKTQHPYQLSDYNDLITKAKKLPPNEQGSVKIKSLCNKVVVVTGAGGGLGKSHAIWFARYGAKVVVNDIKDPFSVVEEINKLYGEGTAIPDSHDVVTEAPLIIQTAISKFQRVDILVNNAGILRDKSFLKMKDEEWFAVLKVHLFSTFSLSKAVWPIFTKQKSGFIINTTSTSGIYGNFGQANYAAAKAAILGFSKTIALEGAKRGIIVNVIAPHAETAMTKTIFSEKELSNHFDASQVSPLVVLLASEELQKYSGRRVIGQLFEVGGGWCGQTRWQRSSGYVSIKETIEPEEIKENWNHITDFSRNTINPSSTEESSMATLQAVQKAHSSKELDDGLFKYTTKDCILYNLGLGCTSKELKYTYENDPDFQVLPTFAVIPFMQATATLAMDNLVDNFNYAMLLHGEQYFKLCTPTMPSNGTLKTLAKPLQVLDKNGKAALVVGGFETYDIKTKKLIAYNEGSFFIRGAHVPPEKEVRDGKRAKFAVQNFEVPHGKVPDFEAEISTNKDQAALYRLSGDFNPLHIDPTLAKAVKFPTPILHGLCTLGISAKALFEHYGPYEELKVRFTNVVFPGDTLKVKAWKQGSVVVFQTIDTTRNVIVLDNAAVKLSQAKSKLLast
1 -237.000[I] KOG1206 Peroxisomal multifunctional beta-oxidation protein and related enzymes  ali  100  1MPGNLSFKDRVVVITGAGGGLGKVYALAYASRGAKVVVNDLGGTLGGSGHNSKAADLVVDEIKKAGGIAVANYDSVNENGEKIIETAIKEFGRVDVLINNAGILRDVSFAKMTEREFASVVDVHLTGGYKLSRAAWPYMRSQKFGRIINTASPAGLFGNFGQANYSAAKMGLVGLAETLAKEGAKYNINVNSIAPLARSRMTENVLPPHILKQLGPEKIVPLVLYLTHESTKVSNSIFELAAGFFGQLRWERSSGQIFNPDPKTYTPEAILNKWKEITDYRDKPFNKTQHPYQLSDYNDLITKAKKLPPNEQGSVKIKSLCNKVVVVTGAGGGLGKSHAIWFARYGAKVVVNDIKDPFSVVEEINKLYGEGTAIPDSHDVVTEAPLIIQTAISKFQRVDILVNNAGILRDKSFLKMKDEEWFAVLKVHLFSTFSLSKAVWPIFTKQKSGFIINTTSTSGIYGNFGQANYAAAKAAILGFSKTIALEGAKRGIIVNVIAPHAETAMTKTIFSEKELSNHFDASQVSPLVVLLASEELQKYSGRRVIGQLFEVGGGWCGQTRWQRSSGYVSIKETIEPEEIKENWNHITDFSRNTINPSSTEESSMATLQAVQKAHSSKELDDGLFKYTTKDCILYNLGLGCTSKELKYTYENDPDFQVLPTFAVIPFMQATATLAMDNLVDNFNYAMLLHGEQYFKLCTPTMPSNGTLKTLAKPLQVLDKNGKAALVVGGFETYDIKTKKLIAYNEGSFFIRGAHVPPEKEVRDGKRAKFAVQNFEVPHGKVPDFEAEISTNKDQAALYRLSGDFNPLHIDPTLAKAVKFPTPILHGLCTLGISAKALFEHYGPYEELKVRFTNVVFPGDTLKVKAWKQGSVVVFQTIDTTRNVIVLDNAAVKLSQAKSKL 900
2 -64.400[IR] KOG4169 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases  ali follow..  15  1....MDLAGKNVVYLGGFGGIGQKCVQELLQRPIKALIFDL---------NANEQLLAKWKSQHPDTDVFYHKLDITSDIDAAYKATAERFGHFDVVVNGSGL--------MNDRLVELTIQINLLGVINSTLTALEYMDKAKGGLIVNISSVAGLQPTAIMAIYSAAKTGVTTFTRAMANP-AHSGVGFLTICPGFTDTGLLEDIGNKTTFTYDTPMLAMFNRVKRQKAEDCA-----------------------------------------------------------------------------------------RNLVSAIETSKNGTVLMLEMGETTEGLALIVDDDLLAEWKKQHPDTEIFYQKMDITQKSDIDAAYKATAEKLGHFDVVVNGSGL--------LDDRRIELTIQINLVGVINSTLTALEYMDKSKGGRIVNISSVAGLQPTPLMAIYSTSKTGVTTFTRAMASPIAHSGVGFITICPGYTNTYETRMRTVFSKVKGQTAEVCARNIVNAIETAK--------NGAVLMLELGEIHELDIPN................................................................................................................................................................................................................................................................................................................................................. 467
3 -61.700[IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)  ali follow..  30  1............................................................................................................................................................................................................................................................................................................................MGKLTGKTALITGASQGIGEGIARVFARHGANLILLDISDIEKLADELGGRGHRCTAVKADVRDFASVQAAVARAKETEGRIDILVNNAGVCRLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTVLTEMAKAIPLRRLADPLEVGELAAFLASDE-----SSYLTGTQNVIDGGSTL....................................................................................................................................................................................................................................................................................................................................................... 255
4 -58.900[R] KOG0725 Reductases with broad range of substrate specificities  ali follow..  24  2..................................................................................................................................................................................................................................................................................................................................SCALVIGATSTLGKAVVRRLAFTGYKVAAAADCSVGKVAEDNIKVGGDVTAFSLDVANAEHRKELITKVAEKLGGLDTLIIVPPQNEVGEIIETSGEDFDKLFANNLTTPFRLSQAAMSTLAKSQNGSIIYLTSCFGFTPSIDMGLYSVASSSVLSLTKSVAQSAAKQGVRVNSVVSGMIEGIKQHLESMIPLGRLGRPSDVASYVEFLASTK-----ARYITGENCIVGGGVSYRL..................................................................................................................................................................................................................................................................................................................................................... 253
5 -57.300[R] COG4221 Short-chain alcohol dehydrogenase of unknown specificity  ali follow..  21  1...........................................................................................................................................................................................................................................................................................................................MSESLQGKIAVITGAASGIGLATTEALLEQGATVVMVDWN-EKALNDLAAKLGERAIPQVTNLLDADSCNAMIPEILGKVDHIDILYCNAGTYIGGDLTETTPEAIDKMLNLNVNAVMKNVQAVVPHMSERKTGDIIVTCSIAGHFPTYWEPVYSGSKWAITSFVQGMRRQMIPHGVRVAQVSPGPVVSALENLRKAKESGSLIDASEVADAVVYMLTRK-----RTVTIRDMLVLPTNFDR....................................................................................................................................................................................................................................................................................................................................................... 242
6 -57.100[I] KOG1200 Mitochondrial/plastidial beta-ketoacyl-ACP reductase  ali follow..  33  58...............................................................................................................................................................................................................................................................................................................AQATATEQSPGEVVQKVESPVVVITGASRGIGKAIALALGKAGCKVLVNSAKEAEEVAKQIEEYGGQAITFGGDVSKATDVDAMMKTALDKWGTIDVVVNNAGITRDTLLIRMKQSQWDEVIALNLTGVFLCTQ-----------GRIINISSVVGLIGNIGQANYAAAKGGVISFSKTAAREGASRNINVNVVCPGFIASDMKKILGTIPLGRYGKAEEVAGLVEFLALSP----AASYITGQAFTIDGGIA........................................................................................................................................................................................................................................................................................................................................................ 307
7 -53.100[Q] KOG1204 Predicted dehydrogenase  ali follow..  18  2.................................................................................................................................................................................................................................................................................................................................GKVILITGASRGIGLQLVKTVIEEDDECIVYGVARTEAGLQSLQREADKFVYRVLDITDRSRMEALVEEIRQKHGKLDGIVANAGMLEPQSNSEHDIKQWERLFDVNFFSIVSLVALCLPLLKSSPFGNIVFVSSGASVKPYNGWSAYGCSKAALNHFAMDIASEEPSDKVRAVCIAPGVVDTQMERFTQLYKTSSLLDPKVPAAVLAQLVLKG----IPDSLNGQYLRYNDERLGPVQ.................................................................................................................................................................................................................................................................................................................................................... 262
8 -50.300[I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)  ali follow..  15  1............................................................................................................................................................................................................................................................................................................................MGFLSGKRILVTGVASSIAYGIAQAMHREGAELAFTYQNDLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDL-----SAGISGEVVHVDGGF......................................................................................................................................................................................................................................................................................................................................................... 251
9 -43.700[R] COG0300 Short-chain dehydrogenases of various substrate specificities  ali follow..  26  1...............................................................................................................................................................................................................................................................................................................................MRKKTIFITGASSGLGRQLAIDFSWEETVLCLFARSQEENVQRIVVENGGEAHIYPVDLADPQSIDRSFAEAISAVGVVDVLINNAGYGVFEPFCDSQMDENERMFRVNVFGLMRATAAVLPTMREQGSGHIINIASQAGKIATAKSAIYSATKHAVLGFTNSLRMELKGTGIHVSAVNPGPIQTDKEGAYTSKVQRIMLDPEDVSEKIVQLTKKP............................................................................................................................................................................................................................................................................................................................................................................. 224
10 -40.700[Q] KOG1201 Hydroxysteroid 17-beta dehydrogenase 11  ali follow..  23  46...........................................................................................................................................................................................................................................................................................................................APKSIAGEVAVVTGAGHGLGRAISLELAKKGCHIAVVDINVSEDTVKQIQDIYKRAKAYKANVTNYDDLVELNSKVVEEMGPVTVLVNNAGVMMHRNMFNPDPADVQLMINVNLTSHFWTKLVFLPKMKELRKGFIVTISSLAGVFPLPYSATYTTTKSGALAHMRTLRMELDQKDIHVTTVLPSFLRTQLTHTIGFGDVYPLFTGEEVAQRIV................................................................................................................................................................................................................................................................................................................................................................................... 270
11 -38.100[Q] KOG1210 Predicted 3-ketosphinganine reductase  ali follow..  24  24.........................................................................................................................................................................................................................................................................................................................SPKPLALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLRNEDKLLQAKKEIEMHSIVVLCISVDVSDYNQVENVIKQAQEKLGPVDMLVNCAGMAVSGKFEDLEVSTFERLMSINYLGSVYPSRAVITTMKERRVGRIVFVSSQAGQLGLFGFTAYSASKFAIRGLAEALQMEVKPYNVYITVAYPPDTDTKPLETRLISETTSVCKPEQVAKQIV................................................................................................................................................................................................................................................................................................................................................................................... 255
12 -37.000[M] COG3967 Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)  ali follow..  18  1.............................................................................................................................................................................................................................................................................................................................MKMTNNTVLITGGSAGIGLELAKRLLELGNEVII--CGRSEARLAEAKQQLPNIHTKQCDVADRSQREALYEWALKEYPNLNVLVNNAGIQKEIDFKKGTEEVDGDEIELNFQAPVHLSALFTPHLMKQPEAAIVQVTSGLAFNPLAVYPVYCATKAALHSFSLTLRHHVRDTSVEVIEMAPPMVDTGLNQKSKQGLTYRGISSEEYVQYFL................................................................................................................................................................................................................................................................................................................................................................................... 214
13 -35.500[Q] KOG1205 Predicted dehydrogenase  ali follow..  25  41...........................................................................................................................................................................................................................................................................................................................ESEKVNGKVVIITGSSSGIGEHLAYEYARRGAYLTLVARREDQVVADRCRKLGSDVAVVRGDVSVIKDCKRFVQETISRFGRLDHLVNNAGIAEAKFFEDYSESDVLPIVNTNFWGPVYATHFAIPHLKKTK-GKIIAVASPAGWSGVPRMSIYAASKAAMINFYETLRIELHP-EVGVTIVFPGLIENGNTN-QDWSQVVTIESAAECAKAVV................................................................................................................................................................................................................................................................................................................................................................................... 266
14 -33.000[Q] KOG1209 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases  ali follow..  21  6................................................................................................................................................................................................................................................................................................................................ESPVVLITGCSQGIGHALAREFTEKGCRVVATSRSRST--MTDLEQDS-RLFVKELDVQSDQNVSKVLSEVIDKFGKIDVLVNNAGVQCVGPLAETPISAMENTFNTNVFGSMRMTQAVVPHMVSKKKGKIVNVGSITVMAPGPWAGVYTATKAAIHALTDTLRLELRPFGIDVINVVPGGIRTAIRERAFISQRMNPTPAETFARDTVAAVLKKNP........................................................................................................................................................................................................................................................................................................................................................................... 264
15 -31.300[S] COG3777 Uncharacterized conserved protein  ali follow..  10  12.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................REETRHELVTPSLVERFNATFDHEGAVAPLLIH----LTQPAALTSRLGPDGHPA--RGGFLPPVPLPRRMWAGGAFTFRDD-IRVGDIVTRTSRIQDVVVKEGRGTLCFVTVGHEFHSNGRHAVTERQDIVYRGADM------------SNPAAKTQPAVPHGPHCRFITPSAPLLFRYSALTFNGHRIHYDAPYVRNVNYPGLIVHGPMQATMLVRFATEI-KPPVRFDFRSLSPLFDDADFTLNAIDDGEGLKLWTSYANGPVAM--EARALW....... 276
16 -30.300[I] COG4982 3-oxoacyl-[acyl-carrier protein] reductase  ali follow..  10  34..DQIEEMDSIESITDGASSRRNQ------------LLVDLGSEL-SLGAIDGVAEADLAGLRSQVTKLARTYKPYGPVLSELINDQLRS--------LGPSGKRPGVIAERVKKIWEL-------GDGWVKHVTVEIALGTREGTSVRGGPLG-NLNEGALADVDSVDKAVDAAVASVA---ARHGVVVALPSAGSGGSATVDVAALSEFTDQHDGVLASAARLVLGQLGLDGPVTAAPATTDTGLIDVTAELSTDWPRLVAPVFDVKKAVVFDDRWASAREDLVRLWLNDEGEIEAQWSHLSERFEAAGAQNPDRGLYSSEIAVVTGASKGIAASVAARLLDGGATVIATTSKLDRALYRDHARYGAALWVVAANMASYSDIDALVEIHIKDAQTPTLLFPFAAPRVIGDLSEAG-ARSEIEMKVLLWAVQRLIVGLSKIGTERDVASVLPGSPNRGMFG--GDGAYGEAKSALDAVVSRWHAESWAARVSLAHALIGWTRGTVIVSAVEEAGVTTYSTDEMAAMLLDLCNAESKVAAAGTPI--TVDLTGGL----------GEVDLDMAELAAKAREDHAAQAAEDEATEASEVAGTIAALPSPPRGYTPASPHWDDLDVDPADLVVIVGGAEIG-GSSRTRFEMEVAGELSA---------------------------------AGVLEL-------------TTGLIRWEDDPQPG---------YDTESGELVDESELDTVVQRCG--------------------------VDDGTIDPDHAYPLLVSVFLDKDFAFVVSSEADARA.................................................................................... 803
17 -30.000[I] KOG1014 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3  ali follow..  20  48.................................................................................................................................................................................................................................................................................................................................GQWAVITGAGDGIGKAYSFELAKRGLNVVLRTLEKLEAIATEIERTGRSVKIIQADFTKDDIYEHIKEKLAG---EIGILVNNVGMLPNPSHFLNAPDEIQSLIHCNITSVVKMTQLILKHMESRQKGLILNISSGIALFPWPLYSMYSASKAFVCAFSKALQEEYKAKEVIIQVLTPYAVSTAMTKYLNTNVI--TKTADEFVKESL................................................................................................................................................................................................................................................................................................................................................................................... 256
18 -28.700[QR] KOG1610 Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases  ali follow..  19  20........................................................................................................................................................................................................................................................................................................................ERQVVSHLQDKYVFITGCDSGFGNLLARQLDARGLRVLAACLTEKG--AEQLRGQTSDRLTVTLDVTKMESIAAATQWVKEHVGGLWGLVNNAGILTPTLCEWLNTEDSMNMLKVNLIGVIQVTLSMLPLVRRAR-GRIVNVSSILGRVA-FFVGGYCVSKYGVEAFSDILRREIQHFGVKISIVEPGYFRTGMTN........................................................................................................................................................................................................................................................................................................................................................................................................ 215
19 -28.300[Q] KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)  ali follow..  17  39..........................................................................................................................................................................................................................................................................................................................NERVSAKGLVAVVTGSNCGIGFETVRELNLRKADVYMRSEEKANEAKRMLVRQGCRLHFIECDLTDFESVRRAAKETLESTDTIDILINNAGIMFQSKH-EQTKDGHEKTWQSNHLGPFLLTELFLPAVKKSSYARIINVSSRIHLKSE-MMKSYRQSKLANVMHARALTKELRKDGVTVNSLHPGVVNTGIKQITAVFRWFLMKTSRDGAQTSIFLALG----KKIGGISGKYFA.............................................................................................................................................................................................................................................................................................................................................................. 301
20 -27.800[R] KOG1611 Predicted short chain-type dehydrogenase  ali follow..  14  1...............................................................................................................................................................................................................................................................................................................................MSPKSVVVTGSNRGLGFGLVQQFLKDPNVQHVIATARDVDKATALKGICDPRLHILQSLGSDESIANFAEKVSEIVGELTLLINNAAVMLPVTKQKPDRKVVLDLFESNTIGPMMLTQSLVPLIIKSRGAIINIASEFLGSISEYKAMAYRMTKCAVNQFTKTLSIDLKDDHILTAGICPGMVQTDMSK-------KGQLTIEESSSQILAAFNKLGATH-----NGGYFRRDLSII........................................................................................................................................................................................................................................................................................................................................................ 249
21 -27.100[S] COG3007 Uncharacterized paraquat-inducible protein B  ali follow..  12  22..............................................................................................................................................................................................................................................................................................................ANVKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAGCGADTLGVFFERSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASVFNSALKPIGNAVNLRGLDTDKEVIKESIDALLDAGVLAEGAQTTAFTYLGETHDIYWNGSIGAAKKDLDQKVLAIRESLAHGGGDARVSVLKAVVTQASSAIPMKVMKEKGTHEGCIEQVYSLYKD--------SLCGDSPHMDQEGRLRADYKELDPEVQNQVQQLWDQVNDNIYQLTDFV...................................................................................................................................................................................................................................................................................................................... 364
22 -25.500[I] KOG1478 3-keto sterol reductase  ali follow..  19  3..................................................................................................................................................................................................................................................................................................................................KVVLITGASSGIGLALCKRLLAEDDELHLRNMSKAEAVCAALLASTAEVTIVQVDVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNKITADGLQEVFETNVFGHFILIRELEPLLCHSDNSQLIWTSSRSARKSNFGKEPYSSSKYATDLLSVALNRNFNQQGLYSNVACPGTALTNLTYGILPPFIWTLLTPYNGTEALVWLFKPESLNPLIKYLSA.................................................................................................................................................................................................................................................................................................................................................................. 288
23 -17.600[G] KOG0747 Putative NAD+-dependent epimerases  ali follow..  11  3.....SYTPKNILITGAAGFIASHVANRLIRSDYKIVVLD-----------KLDYCSNLKNLNPSKHSPNFKFVKGDIASADLVNHLLITE-GIDTIMHFAA----QTHVDNSFGNSFEFTKNNIYGTHVLLEAC------KVTGQIFIHVSTDEVYGETDEDAYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMR-EDVAEAFEVVLHKG--EVGHVYNIGTGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDGSEDNSLAATLSEKPS------QTHMVVPSQRSNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGK----------------------GRLEDRSSLLQDIQSV-----KPTHVFNSAGVTGRPNV-DWCESHKTETIRANVAGTLTLADVC------REHGLLMMNFATGCIFEYDDKSFYSKTKAMVEELLKEYD---NVCTLRVDLNNP---RNFITKISRYNKVVNIPN-DELLPISIEMAKRN---------LKGIWNFTNP-----------------GVVSHNEILEMYRDYINPE...................................................................................................................................................................................................................................................................................................................... 615
24 -17.300[I] COG2030 Acyl dehydratase  ali follow..  25  48.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TEADIVNFACLSGDHFYAHMDKIAAAESIFGERVVHGYFVLSAAAGLFVDAIANYGLESLRFIEPVKPGDTIQVRL-KPTGVVEWAVEVNQHQTPVALYSILTLVARQHG. 177
25 -10.900[IE] KOG1430 C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases  ali follow..  14  1............................................................................................................................................................................................................................................................................................................................MGNKSGEVLLVTGGSGFLGQHLIKQLLERKEELGIKEIRSLDIVPYKNNIGHEETSLLRTYVADIGGDLKALSPIFNG---VDGVFHCAASVK------EYPPNYEELERVNVNGTLAVVDLC----IQNNVKRLVYTSCTSVCFVPFKGRSYASSKL-IVLNSNGAPLHNQKEYLATSAMRAPLTYGECDSHFITEIFDFLSTRGWVFPRIGHICAYKALKVSDKAVNGLPVFVTDD.......................................................................................................................................................................................................................................................................................................................................................... 280
26 -10.800[C] KOG2865 NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit  ali follow..  13  63............................................................................................................................................................................................................................................................................................................................RSSVSGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDSPHLKLMGDLGQVVPMKFDPRDEDSIKAVMAKA-------NVVINLIGREYETRNFSFE--------DANHHIAEKLALVC----EHGGIMRYIQVSCLGA--SVSSPSRMLRAKA--ALPEATIMRPATMIGTEDRILNPWSMFVKKYGFLPLIGGGTTKYPVYVVDVAAAIVA---ALKDDGSSMGKTYELGG-----------------PDVFTTHELAEIMYDMIREW...................................................................................................................................................................................................................................................................................................................... 302
27 -10.500[M] COG1089 GDP-D-mannose dehydratase  ali follow..  15  2.................................................................................................................................................................................................................................................................................................................................TKVALITGVTGQDGSYLAEFLLDKGYEVHGIKTERIDHIYQDPHGSNPNFHLHYGDLTDSSNLTRILKEV-----QPDEVYNLAA----MSHVAVSFESPEYTADVDAIGTLRLLEAIRFLGLENKT-RFYQASTSE-LYGLVQESPYAVAKLYAYWITVNYR---ESYGIYANHESPRRGETFVTRKITRDSLRDWGHAKDYVRMQWLMLQQE---------QPEDFVIATGVQYSVR.................................................................................................................................................................................................................................................................................................................................................... 260
28 -10.500[MG] COG0702 Predicted nucleoside-diphosphate-sugar epimerases  ali follow..  13  17...............................................................................................................................................................................................................................................................................................................KNALSTASEEPPMTLANLPPLVTVFGGSGFVGRHVVRMLAKRGYRIRVAVRRPDLAGFLQPLGNVGQISFAQANLRYRDSIIKAVE-------DADHVVNCVGILAESGRNTFD--------AVQEFGAKAIAEAA-----RDTGATLTHISAIGA--DANSQTGYGRTKG-------RAEAAIHSVLPGAVILRPSIIARNLPFLPLIGGGKTKFQPVYVEDVAEAVAR----SVDGKLKPGAIYELGG........................................................................................................................................................................................................................................................................................................................................................... 247
29 -9.940[Q] COG3321 Polyketide synthase modules and related proteins  ali follow..  14 1416.......HDGLRVHVRKPGDLQSLELVASDRVPLEVAVSMSSINFADVLIAFGRFPIIDDRDPQLGMDFVGVVTAVGEGVTGH--GGFSEGGCWRTFLTCDANLAVTLPSGLTDEQAITAATAHATAWYGLNDLA-----GIKVGDKVLIHSATGGVGQAAISIARAKGAEIFATAGNPTKRAMLHDLGIEHVYDSRSVEFAEQIRRDTVLNSLTGAAQRAGLELLTFGGRFVEIGKADVYGNTRLGLFPFRRGLTFYYLDLALMSVTQPDRVRELLATVFNLTADGVLTAPECTHYPLTDAANAIRAMSNAEHTGKLVLDDGSYIITGGLGGLGLFFASKLAEAGCGRIVQPNPKARQTIERLCAAGADIVVECGNIAEPYTADRLVNAATATGLPLRGVLHSAAVVEDATLTNITDELIDRDWSPKVYGSWNLHCAT----IGQPLDWFCLFSSGAALLGSPGQGAYAAANS----WVDLFAHWRRAQGLPVSAIAWGAWGEVGRATFLAEGGEIMITPDEGAYAFEMLVRYDRPYSGYIPILGAPW............................................................................................................................................................................................................................................................................................................................................................... 1986
30 -9.580[M] KOG1371 UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase  ali follow..  12  76...............................................................................................................................................................................................................................................................................................................SQSSSFTSPSAFSQREEGVTHVLVTGGAGYIGSHAALRLLRDSYRVTIVD-LGAVKTLQQLFPQTGRLQFIYADLGDPLAVEKIFSE------AFDAVMHFAAVAYVGESTLYPLKYYH----NITSNTLGVLEA----MARHKVKKLI-YSSTCATYGEPEKNPYGKAKKMAEDMILDFSKNSDMAVMILRYFNVIGSDP--GGRLGEAPRPELREQGRISGACFDAARGFIPGLQ---VKGTDYKTSDGTCIRDYIDVTD---------LVDAHVKALEKAQPRKVGIYNVGTGKGRSVKEFVEACKKATGVEIKVDFLPRRPGDYAEVYSDPTKILKDLNWTARFTN....................................................................................................................................................................................................................................................... 414
31 -9.520[E] KOG2380 Prephenate dehydrogenase (NADP+)  ali follow..  10  54.........RIAII--GFGNYGQFLAETLISQGHILFAHSRSDHSSAARRLGVSYFTDLHDLCERHPDVVLLCTSI-LSIENILKTLPFQRLRRNTLFVDVLSVKEFAKTLLLQ----DILCTHMFGVYDKVRIGEERLRVSRCESFLEIFVREGC--EMSVTDHDKFAAESQFITHTLGRLLGMLKLISTPINTKGYEALLD------------------LAENICGDSFDLYYGLFVYNNNSLEVLERIDLAFEALRKELFSRLHGVVRKQSFEGEAKKVHVFPNCGENDASLDMMRSEDVVVKYEYNSQVSGSVNDGSRLKIGIVGFGN-FGQFLGKTMVKQGHTVLAYSRSDYTDEAAKLFSDLDDLFEEHPEVTSILSTEKVLESLPFQRLKRSTLFVDVLSVKEFPRNLFLQ----DILCTHMFGPFDKVRIGMDDRRKSRCNSFLDIFAREGC--EMSCAEHDWHAAGSQFITHTVGRLLEKLSLESTPIDTKGYETLLKLV....................................................................................................................................................................................................................................................................................................................................................................................................... 575
32 -9.070[R] KOG4288 Predicted oxidoreductase  ali follow..  12  3....................................................................................................................................................................................................................................................................................................................................IVVLGGSGFLGHNICKLAIAKGYEVVSVSRRGAGGLHNKEPWMDDVEWETLDAQKDPNSLLPVLR-------DASAVVNSVGILMENNYKKILQNPRGPVSAINRDLAIETAKIA----AKANVPVYCYVSAHAA------DPRYIKTKREAEREISKIS------NLRSIFLRPGFM.............................................................................................................................................................................................................................................................................................................................................................................................................. 196

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Multiple flexible structure alignment using partial order graphs. Bioinformatics. 2005 Mar 3;