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Query: [R] KOG1777 Putative Zn-finger protein, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSSSSSPFFHPPPQQVMDDTTQQSPSYSQNSNSPSQHTFESMEPAAGGSTSMRYSPSGSSEADNPTLGLFSAQASYPYSLRKRRPCLTKDEDLCFPITAATADETPQPTMKKFKLECLSPGEARDFSIEDESGTNLEAKMETTECEPEEEEAVEEEDQQDHINRLPEELLLKVFSFLPDKSLLACSSVSYRFNQISNSHEVWKELYCNLYDYRIPLFHPSHAKFEFREQSRWRDGNPWKESHRQLHHGVHVMKEPRVNLRSVNYRCFDQIEKAQSFLEEDEYREKLIFLHTGVHEPIDTILINTDVQIIGASDSRDITSSVVLEGSKNTALTFTDGSANAYFGFITVRFRADPVCRQQPQIAQQAQQMNHFYSILVTDKDAMPYIERCDITSKVGNGAAVCVKKSAAPKFKYCTVLDCENVGIYITDNATGHYEHCEIARNTLAGVWVKNHANPYFRKCTIHSGKDVGVFTFEHGQGYFEKCNIHSNRISGIEVKNSANPVVIRCEVHHGYTGGIYVHERGRGQFMENRIYANAYAGIWITSHSDPTIRKNEIFTGQQGGVYIFGEGRGLIEQNNIYGNALAGIQIRSQSDPIVRLNKIHDGLHGGIYVHEKGRGLIEENEVYGNTLAGIWVTTGSSPILRKNRIHSGKQVGVYFYDQGHGLLEENDIFNHLYSGVQIRTGSNPKITRNKIWGGQNGGVLVYNGGKGCLEDNEIFDNAMAGVWIKTDSEPTLRRNKIYDGRDGGVCIFNRGKGLLEDNEIFRNAQAGVLISTESNPTLRRNRVFDGKSAGIEITNGATATLEENQLFRNKYGGLCVATGVTPVQRGNRIYDNHDTISRAIKTGLCLFKVSSNNSFPMHNFYRCTTCNTTERNAICTNCIRTCHRGHSVELVRFDRFFCDCGAGTLERHCHLQNVPRDNDTVYDSATPISTETGTEILast
1 -181.000[R] KOG1777 Putative Zn-finger protein  ali  100  1MSSSSSPFFHPPPQQVMDDTTQQSPSYSQNSNSPSQHTFESMEPAAGGSTSMRYSPSGSSEADNPTLGLFSAQASYPYSLRKRRPCLTKDEDLCFPITAATADETPQPTMKKFKLECLSPGEARDFSIEDESGTNLEAKMETTECEPEEEEAVEEEDQQDHINRLPEELLLKVFSFLPDKSLLACSSVSYRFNQISNSHEVWKELYCNLYDYRIPLFHPSHAKFEFREQSRWRDGNPWKESHRQLHHGVHVMKEPRVNLRSVNYRCFDQIEKAQSFLEEDEYREKLIFLHTGVHEPIDTILINTDVQIIGASDSRDITSSVVLEGSKNTALTFTDGSANAYFGFITVRFRADPVCRQQPQIAQQAQQMNHFYSILVTDKDAMPYIERCDITSKVGNGAAVCVKKSAAPKFKYCTVLDCENVGIYITDNATGHYEHCEIARNTLAGVWVKNHANPYFRKCTIHSGKDVGVFTFEHGQGYFEKCNIHSNRISGIEVKNSANPVVIRCEVHHGYTGGIYVHERGRGQFMENRIYANAYAGIWITSHSDPTIRKNEIFTGQQGGVYIFGEGRGLIEQNNIYGNALAGIQIRSQSDPIVRLNKIHDGLHGGIYVHEKGRGLIEENEVYGNTLAGIWVTTGSSPILRKNRIHSGKQVGVYFYDQGHGLLEENDIFNHLYSGVQIRTGSNPKITRNKIWGGQNGGVLVYNGGKGCLEDNEIFDNAMAGVWIKTDSEPTLRRNKIYDGRDGGVCIFNRGKGLLEDNEIFRNAQAGVLISTESNPTLRRNRVFDGKSAGIEITNGATATLEENQLFRNKYGGLCVATGVTPVQRGNRIYDNHDTISRAIKTGLCLFKVSSNNSFPMHNFYRCTTCNTTERNAICTNCIRTCHRGHSVELVRFDRFFCDCGAGTLERHCHLQNVPRDNDTVYDSATPISTETGTEI 936
2 -19.000[P] COG3420 Nitrous oxidase accessory protein  ali follow..  14  39................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAIEKAEPGDVVRLRAGRHEGAVVIDRA----IELTGEPGAVLD-----GLGTGNAITVNAPNAIVRGLEVHGSGDNGIFVSRTATGARVENNRLIGNTYGIYLHGAADSIAIGNEVLGRRGSGVSVWNAPGAQVVGNTIRYGR-DGIYTNASRKNIFRDNVMEDVR-FAVHYMYTDDSAVIGNVSRNNS-VGFAIMYTNRLKILNNVSEGDRDHGLLLNYANSSIITGNRVVGRMEHGVPGEEKVEASAGETARLGP-EKCVFIYNANKNKFSENSFENCSIGIHFTAGSEGNAMSGNSFINNRNQVKYVGTRN............................................................................................. 367
3 -14.500[R] KOG2997 F-box protein FBX9  ali follow..  12  1MAEAEEDCHSDTVRADDDEENESPAETDLQAQLQMMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLESSQIHISVLPMEVLMYIFSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVW...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 231
4 -12.900[E] KOG3926 F-box proteins  ali follow..  18  1M-----PFI-PGETWVRTPHTSSSPKFILDSGSSASSVPKFGLYDSEQNSSCGSLPGSGIERCNSSSSSAEDSDSNPHCFVKST---SKEFIGCTSMSEAVNVSTAKDLVKQFGNGLDNVNVCGSPQLVSRHHQTASSLLDLISENNVRTAADADDESALTFFDLPREIVLLILRRLPDNSLLETAQVHEALQDINGEDKIWKSLCTFHFQ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 303
5 -12.600[R] KOG0274 Cdc4 and related F-box and WD-40 proteins  ali follow..  16  3.....................................................................................................................................SEPTSLDFTSSNLRRMNRDHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRTAFFHHF...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 79
6 -9.840[J] KOG0002 60s ribosomal protein L39  ali follow..  1MCPEGCQY--LRTPQLGEAGGLHQPPGLCPRRSLRLECASRPNPTLCLLRLPSLRPGPDPSGAGRVR-VWLLAPPCPQSVSGEMAQYLEKPRVCGRMQAKPTHHDTALRSGITSLTTRGAAAEIKVKMQSPGPSPSVAPTSSATFIALGTFRIKRFLDKKQKQNRPIPQWIWM----------------KTGNKIRYNSKRLEKNQAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 196
7 -9.780[KD] COG5189 Putative transcriptional repressor regulating G2/M transition  ali follow..  10  6MTMASNM-----ATSTTTTATSAHASINSSSNFNIDIDSNQNTPSILINNNSDSSNGKNTDFNGVNNIHQKNIMNNT-KLRRESIAHSQGMGGVSSVGSWLRDEIISRRNSIVPASANGAASAAASATTTATNTLQQPTKRPSVSNPPYHRGYSISPQIAYTAYLPNE------QYC--KDYSCCGLSLPGLHDL..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 216
8 -9.730[K] KOG0850 Transcription factor DLX and related proteins with LIM Zn-binding and HOX domains  ali follow..  12  1MSGS----FDRKLSSILTDISSSLSCHAGSKDSPTLPESSVTDLGYYSAPQHDYYSGQPYGQTVNPYTYHHQFNLNGLAGTGAYSPKSEYTYGASYRQYGAYREQPLPAQDPVS----VKEEPEAEVRMVNGKPKKVRKPRTIYSSYQ-------------LAAL--Q-----FQYLALAELAA-TQV-KIWFQ--NRRSKFKK............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 186
9 -9.610[Z] KOG4462 WASP-interacting protein VRP1/WIP, contains WH2 domain  ali follow..  1MAPAPPP---PAPPLMTGDRSALLNSIQKGKKLKKATTNDRSAPVVGGGVVGERKSNTPKSFAAPPVPTGAPSLPTS------SNNTQQAEERPSMPALGGLFAGGMPKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 168
10 -9.560[P] KOG4408 Putative Mg2+ and Co2+ transporter CorD  ali follow..  30  2......................................................................................................................................................AAMETETAPLTLESLPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRRHCKKYW...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 61
11 -9.310[U] KOG3745 Exocyst subunit - Sec10p  ali follow..  17  2.....................................................................................................................................KPSEAREHAIRKIKEYLERRHKQQFKALFGCLTINIYLKIFTLISTPDLCNCRLVCRKFQQLCDYNSIYVKKLLL........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 76
12 -9.250[K] KOG0709 CREB/ATF family transcription factor  ali follow..  515STSSSSASSVASSTST-SSATSPIYRTSRTLGAFEDQCDASSDDSN--ANMPSLVP--MKMSAQPPKRKIVTMNGQPRVTYRAVPASSVNVEQAQPQQKVQYVTMDRPIKYEVLNDYIKMEEESTIRLPNSWSTAGPRLHPQVNASSRTVRPLTVATPVHYNGPSAKKIKTQMF.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 688
13 -9.210[K] KOG0842 Transcription factor tinman/NKX2-3, contains HOX domain  ali follow..  11  1MSLTNTGF-----KDILDLPDTNDEEGSVAEGPEEENEGPEPAKRAGPLGQGALDAVQSLPLKNPFYDSSDNPYTRWLASTEGLQYSLHGLAAGAPPQDSSSKSPEPSA--------DESPDNDKETPGGGGDAGKKRKRRVLFSKAQ-------------TYEL--E-----FRYLSAPELASLTQV-KIWFQ--NHRYKMKR............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 185
14 -9.090[T] KOG4381 RUN domain-containing protein  ali follow..  13  13LSSANN--------NNLSSTSGSGRIKSSSLATGSSASGSSSKPLRSAVKTPTSGSATSLSSG--TMAAKKAPQTGQQQVGKSAKSATAATPTGTTATAIGATATTRAQAAAAKSQ-NPPSQQVQPKQQPPQPQLQQQQASNSSNTIALPKASHANTSEELAGGVQDTIYLCNFEWLCLKEL.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 200
15 -9.010[R] KOG4377 Zn-finger protein  ali follow..  10  1MKAQHSP-FKLERSEYSGPGARLPGGSSSTVATAEDRSATDLTPSRYRKRGRVWAPTSSLEQPSKRIVNQPTHFGARSETESRSSRHESSSTILDKVSVVRAAGTFYPENANSAAQGETPEVVSSRYNSRQESNDLEVDQPEDLSMRPSLPEATATPA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 192

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 6 4 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.