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Query: [G] KOG2234 Predicted UDP-galactose transporter, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKNGIAECPACHSKLVSPGSKTISRAYDDHKIRVSSKQRVLNVLLVVGDCMLVGLQPVLVYMSKVDGKFNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVSTFVQAARNNVLLAVPALLYAINNYLKFTMQKLWLYGKSMSCGVLSVPLYFNPATVKMLSNLKVLVIAVLLKMVMKRRFSIIQALALLLIGISVNQLRSLPEGATAIGIPLATGAYVCTVIFVTVPSMASVFNEYALKSQYDTSIYLQNLGIVDLFVLFSGLLSSVITNVHNLFLYGYGAIFNFLGILGTVIYKGLQYALLRNFVMILTGPGSFDILQGHSRATMFLILNNAAQGILSSFFFKYADTILKKYSSTVATIFTGIASAALFGHVITMNFLLGISIVFISMHQFFSPLAKARDEQQQNGNLELGNTKDTHRANESFINMAAGANEEASHRGESDDRTPLLPRLast
1 -119.000[G] KOG2234 Predicted UDP-galactose transporter  ali  100  1MKNGIAECPACHSKLVSPGSKTISRAYDDHKIRVSSKQRVLNVLLVVGDCMLVGLQPVLVYMSKVDGKFNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVSTFVQAARNNVLLAVPALLYAINNYLKFTMQKLWLYGKSMSCGVLSVPLYFNPATVKMLSNLKVLVIAVLLKMVMKRRFSIIQALALLLIGISVNQLRSLPEGATAIGIPLATGAYVCTVIFVTVPSMASVFNEYALKSQYDTSIYLQNLGIVDLFVLFSGLLSSVITNVHNLFLYGYGAIFNFLGILGTVIYKGLQYALLRNFVMILTGPGSFDILQGHSRATMFLILNNAAQGILSSFFFKYADTILKKYSSTVATIFTGIASAALFGHVITMNFLLGISIVFISMHQFFSPLAKARDEQQQNGNLELGNTKDTHRANESFINMAAGANEEASHRGESDDRTPLLPR 458
2 -42.700[R] KOG3912 Predicted integral membrane protein  ali follow..  10  2...................................DHRVFLSLIFVLSGTFNVLVVKWANQQQVIG-QHPVVFTLLMFLGEFLCFAVFKVIRLISNRRGVISDLDSILSQDS--SEFRPVSMLLPTLLDAAASILLFTGLY-----------------LTYATSFQMIRGAALIFVGIFSTMFLNHTLTGRHWLAIFTISCGLLDIISLDVTLPYTDYKSILTGDLLIIIAEILHGLQYVCEEKQLKTS-NVAPLQAAGWQGIFGLGITSMLAICMNFLPSIDPFSCS----------------------AVFDDWGDLFAALQGSISLIMTLIAFTISCAMYNFIGLYIAMYSSSANRLLADGLRVYFIWVFVIIMEWEYMNLVTIMGFLILQMGIILYRQALFLDWYRAAVARWYRARYVDLGTENAAAPNSRPADV................... 380
3 -31.900[S] KOG2766 Predicted membrane protein  ali follow..  10  1MEADSPAGPGAPEPLAEGAAAEFSSLLRRIKGKLFTWNILKTIALGQTLSLCICGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLLV-----------ILKRKWWKYILLGLADVEANYVIVRAYQ-----------------YTTLTSVQLLDCFGIPVLMALSWFILHARYRVIHFIAVAVCLLGVGTMVGADAGREDNSGSDVLIGDILVLLGASLYAISNVCEEYIVKKLSRQEF---LGMVGLFGTIISGIQLLIVEYKDIASIHWDWKIALLF---------------------------------------VAFALCMFCLYSFMPLVIKVTSATSVNLGILTADLYSLFVGLFLFGYKFSGLYILSFTVIMVGFILYCSTPTRTAEPAESSVPPVTSIGIDNLGLKLEENLQETHSA.................. 372
4 -27.900[G] KOG1581 UDP-galactose transporter related protein  ali follow..  10  2....................AEPELVNGGVKENKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKEFFKHSLFLVFCNRLTTSAVSAGALLASKKVLDPVAP-------------VYKYCLISVTNILTTTCQYEALK-----------------YVSFPVQTLAKCAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKTVWGVSLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQI-FYTTLCSCVLSFTGLILQGHLLPAVD-----------------------------------------FVSLHRDCLLDIALLSTVATAISYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLSWEQCIGSVIVFGSLYAKNLLNNKKNSQTQPPPPELPQYEKVESS............................... 344
5 -26.000[G] KOG1583 UDP-N-acetylglucosamine transporter  ali follow..  9  1..............................................................................MALNLKALLGMLFVFIGCCSNVVFLELIIQIDPGAGNLITFAQFLFIALEGLVKIALKDYVILVALFFGANVCNNYAFNFNIPMPLHMIFRSGSLMANMIMGIVLLKKRYNLRQYSSVAMITAGIILCTLVSSGDVKDNTHHSTVGIGLLTIALLVTAYMGIYQEVIYKKYGKHP---SEALFFTHMLPLPGFLIMAGNIVQHFGIAWSSEPVAVPLLGAIGLEWKFPLMLFYLLCNV---------------------VTQYVCISAVYVLTTECASLTVTLVVTLRKFVSLLFSIIYFRNPFTLNHWVGTILVFFGTILFANVINQVRDAYRARSSRKTHFDTAPLAKKVE........................... 352
6 -25.400[GOU] KOG1444 Nucleotide-sugar transporter VRG4/SQV-7  ali follow..  8  4.......................................................................................................................................................TSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGKVTSMELTSFIMMVLSSVVATWGDQQLVESTIFVLNPGYLWMFTNCISSALFVLIMRKRIRLTNFKDMFYNNVLALPLLLVFSFIMEDWSTKNLSVN---------------------------------------------LSADSLAAMVISGLMSVGISYCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPKNFLSFFSIFLGFLSGLLYAVAKQKKIQQQKVLAATLEK...................................... 249
7 -23.000[GOU] KOG1442 GDP-fucose transporter  ali follow..  11  2.........................YKNLEEHNRLVNKYLKIFFVVSLYWCTSILTVFVNKHLLSSDTVNLGAPLFMSWFQCVVSTVICFVASRLSRKYPSVFTFPEGNPLDIDTFRKILPLSVLYTLMIGANNL--------------------SLSYVTVAFYYIGRSLTTVFSVVLTYVILRQRTSFKCLLCCGAIVVGFWLGVDQE-------SLTEVFSWRGTIFGVLSSLALAMFSIQTKKSLGYVNQEVWLLSYY------------------------------------NNLYSTLLFLPLIIINGELESIITYPHLW--ASWFWAAMTLSGLCGFAIGFEIKVTSALTHNISGTAKACAQTVIATQYYHDVRSALWWTSNVVVLVASAAYTRVKQLEMMRQHQQRSTATQKA.................................... 337
8 -22.500[GOU] COG5070 Nucleotide-sugar transporter  ali follow..  10  1.................MSELKTGHAGHNPWASVANSGPISILSYCGSSILMTVTNKFVV------NLKDFNMNFVMLFVQSLVCTITLIIL------------RILGYAKFRSLNKTDAKNWFPSFLLVLM------------------YTSSKALQYLAVPIYTIFKNLTIILIAYGEVLFFGGSVTSMELSSFLLMVLSSVVATWGDQQGAAGAVASFNPGYFWMFTNCITSALFVLIMRKRIKLTNFKDFDT----MFYNNVLALPILLLFSFCVEDWSSVNL--------------------------------------TNNFSNDSLTAMIISGVASVGISYCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPRNFLSILSIFIGFLSGIIYAVAKQKKQQAQPLRK........................................... 337
9 -22.400[GE] KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter  ali follow..  12  29............STTKMNKKNPDQKSDMSSSSSSPKKQTLFISSLIILWYTSNIGVLLLNKFLLSNYGFKF-PIFLTMCHMSACAILSYVSIVF------------KLVPLQYLKSRSQFLKVATSIVFCASVVGGNISLR-----------------YLPVSFNQAVGATTPFFTALFAYIMTFKREAWVTYGALVPVVTGVVIASGGEPG--------HWFGFIMCISATAARAFKSVLQGILLSSEGER---LNSMNLMLYMSPIAVIAL-----------------------------------LPVTIFMEPDVMSVTLTLGRQHKYMYILLLVNSVMAYSANLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTVMGIGGYSITVLGVVAYGETKRRFR.................................................. 355
10 -22.200[S] KOG1443 Predicted integral membrane protein  ali follow..  8  2..................................NRTVFLAFVFGWYFCSIALSIYNRWMFDPKDGLGIGY-PVLVTTFHQATLWLLSGIYIKLRHKPVKNVLRKNNGF-----NWSFFLKFLLPTAV----------------ASAGDIGLSNVSFQYVPLTIYTIIKSSSIAFVLLFGCIFKLEKFHWKLALSVIIMFVGVALMVFKPSDSTSTKNDQAIFGSFLVLASSCLSGLRWVYTQLMLRNNPIQTNTAAAVEESDGALFTENEDNVDNEPVVNLANNKMLENFGIHTIHQLAPIMGITLLLTSLLVEKPFPGIFSSSIVLSIVRGIVLLILPGFAVFLLTIILEQTPVLTVSIVGIVKELLTVIFGIIILSERLSFYNWLGMLIIMADVCYYNYFRYKQDLLQKYHSVSTQDNRNELKGFQDFEQLGSKKIAPYSISVDLTNQEYEL... 428
11 -21.100[GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily  ali follow..  9  7..........................RGRHRLIRRVSGQVYLWLAIFIFGASSAVTRKLTEIGARHFIDGRNPISLCNVLFVGNLCALMVMLLIYSRQWNKATLTQLS-----------------------KKDWLGLTAVAILSGALAPGLIFHALSLTGVNNVILVGRLEPTLALALSVWLLKEQINFGEFIGAIAAFIGVILTIILQPPVSDMMNMGGWLGEFFVAAGSVALAISTIIGKKYLTHIPLGIY-----------------------------------------SIFRTALGTVIFFFIALVLYGREHFADVFSPFLWQWMFLYGGVIVVVGQSFWLIGLKTSTVSTASLVASFTPIAGIVAAYFILSEVPTVAQYLGGGLIMLGIFLSQISKSRQTSHKSPIASTPAEQKVEMDMG.............................. 347
12 -20.400[R] KOG4510 Permease of the drug/metabolite transporter (DMT) superfamily  ali follow..  10  1......................MTLQRISKDYLKPNYGLILLIVSYFFNSSMVVSTKVLENDPLETSQSRINPLQILLVRMSITYCCTLVYMHWNKQS---------VPDIPWGPAPCRKWLILRGIMGFFGVFGMYFSLM-----------------YLSISDAVLITFMSPTLTIFLSFLLLGEPFSKLEALGSLISFSGVVLISPQDDIVETQNPKLRLIAIGVSLLGVCGLSSVYIIIRYIGNKAHAIMS----SYFSLVTTVVAALGVLL--------------------------------------------IPSMSLQLPHSWKQWGLFLNLGISGFIHQILLTMGIQRERAGRGSTQVIYAVFWDVVLFHHWPNIWTWCGMAVIVSSTIWVINMRASKQNVVATAELLSTSDFELDDLED............................. 353
13 -18.200[R] COG2962 Predicted permeases  ali follow..  13  10..........................................VLLALAAYFIWGIAPAYFKLIY-----YVPADEILTHRVIWSFFFMVALLSVSRQWRQ--------VKRLLKTPKKIFLLALSAVLVGGNWLLFIWAVN-----------------NHHMLEASLGYFINPLVNILLGMIFLGERFRRMQWLAVILAVCGVLVQLWTFGSLP----------IIALGLAFSFAFYGLVRKKIAVEAQTGMLVETLWLLPVAAIYLFGIADSPTSH------------------------------------------------MGQNALSLNLLLMAAGVVTLCFTGAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFIWVALAIFVMDAIYTQRKK............................................... 294
14 -17.700[S] COG2510 Predicted membrane protein  ali follow..  16  7..........................................QFWALMSAVFAALTAIFAKVGIQG----INSDFATLVRTFVIIGALCLFLTVTGQWQKPGE-----------SARSWLFLVLSGLATGASWLAYFRALQ-----------------IGDASRVAPIDKLSVVLVALFGAAFLGERMSTINWIGILLIGCGVVLVALR......................................................................................................................................................................................................................................................... 142
15 -17.700[S] KOG2765 Predicted membrane protein  ali follow..  6  173....................................................................................................................................HKTAKTALLFCLLWFAANYFFQLALEMDEAAMITLVSSTSSFFIICLAAVFPSATGDKLTITKVIAVAMNIGGVVA---TMNDLHDTKMTRGVLLALFSAFFYAAYLVFVKRKSDTEEKVDIPLFFETFELPSQGQ------------------------------------------------------------FALLFLNGLVGTVLSEALWLWGCFLTSSLIGTLAMSLQIPLAILFDVLLKNKPYSPMFYMGSIPIFVALVFVSLLMRNDDSDPLMKLFRIVYRKVCRCHKPSIVRVNDDEQQESLISNSD.......... 426
16 -15.900[R] COG5006 Predicted permease, DMT superfamily  ali follow..  9  14.................................................ILVLLIAMSSIQSGASLAKSLFPLVGAPGVT-ALRLALGTLILI-----------AFFKPWRLRFAKEQRLPLLFYGLSLGGMNYLFYLSIQ-----------------TVPLGIAVALEFTGPLAVALFSSRRPVDFIWVVLAVLGLWFLLPLGQ----------DMSHVDLTGAALALGAGACWAVYILTGQRAGAEHGPATVAVGSLIAAIIFVPIGAVQAGDALWHWSILPL----------------------------------------------GLAVAVLSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTGIQILALCAIIAASMGSTLTIRREPQIKQVDVK.......................................... 295
17 -12.400[X] KOG4831 Unnamed protein  ali follow..  13  8.........................................VLALVLVAALWGGTQPLLKRASAGLQRVHEPTWAQQLLQEMKTLFLN--------------------------------EYLMPFLLNQCGSLLYYLTLASTDL----------------TLAVPICNSLAIIFTLIVGKALGEDIGGKRAVAGMVLTVIGISLC-ITSSVPWTAELQLHGKGQLQTLSQKCKREASGTQSER...................................................................................................................................................................................................................... 162
18 -12.000[G] COG4975 Putative glucose uptake permease  ali follow..  10  1.......................................MQFLDFLIALLPALFWGSVVLINVFVGGGPYNQIRGTTLGALIVGLGLLITG------------------FAKFNNPTVIIVGLISGALWAFGQANQLKSISLIGV----------------SNTMPVSTGMQLVGTTLFSVIFLG------EWIAMILLVTGVALTSLKAKNERQSDNPEFKKAMGILIVSTVGYVGFVVLGD-IFGVGGTDALFFQSVGMAIGGFILSMNHKTS------------------------------------------LKSTALNLLPGWGIGNLFMFYSQPKVGVATSFSL-----------SQLLVIVSTLGGIFILGERKDTGIWAGIIIIVIAAII........................................................... 282
19 -9.080[P] COG2076 Membrane transporters of cations and cationic drugs  ali follow..  8  30...........................................................................................................................................IIIFILIAVSFILLIRSYQKIPMAAYTVFVGIGTVGTYLT--IVLGESFSAAQMFFLALLLAGILGMKLFTKESKSQPGGEK............................................................................................................................................................................................................................................. 111
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.