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Query: [K] KOG3119 Basic region leucine zipper transcription factor, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSIVCTLEQKVNFFKAAATTKNLLILKNNTDTNYINNYKQDNPSNNKFPRIQAQSNNSHLQHQQQLQQKLAQLHHYSQQKLSGSDFPYGPRPPTGGKEEKLLLLAPPGKLYPEASVSTAMPEVLSGTPTNSHNKANIAMMNNVRLSNISPTLSMNGSSNEASNLHPLSMYGGSISPQSNDSGMSDSLGKYVPGSGYGDGMMAQSPSQGGNGPQSALTAAQKELFSQRKQREFTPDNKKDESYWDRRRRNNEAAKRSREKRRYNDMVLEQRVIELTKENHVLKAQLDAIRDKFNISGENLVSVEKILASLPTSEQVLSNTKRAKMSGSGGSSSGSSPSGSGSGEGSPQGGHNGYPVGPPLSPLIYGPNGNARPEATVKSVHHIHHAGVAPPPTHLQQLVVPQSQTQHLYQPQPQQHQPHQQQQISQPPQQQQQQQEPSPSAGSSSPVISDPHNRPPSTTIANLQVQLQQALNRNVRPEDLDSLRKVVAAGALYNAAAVVGAPPPPPSAGLYVPAPSAYKDHLEAAAAWSHNVEAAVSSSAVDAVSSSSVSGSAASVLNLSRRACSPSYEHMLSSTTSSTLSSASSSGAVSGDDEQEHEPAHMAPLQLQRSSPQQGSDANNCLPLKLRHKSHLGDKDAAATALLSLQHIKQEPNCSRASPPAWNDGGDNSSDERDSGISIASAEWTAQLQRKLLAPKEANVVTSAERDQMLKSQLERLESEVASIKMILAELast
1 -249.000[K] KOG3119 Basic region leucine zipper transcription factor  ali  100  1MSIVCTLEQKVNFFKAAATTKNLLILKNNTDTNYINNYKQDNPSNNKFPRIQAQSNNSHLQHQQQLQQKLAQLHHYSQQKLSGSDFPYGPRPPTGGKEEKLLLLAPPGKLYPEASVSTAMPEVLSGTPTNSHNKANIAMMNNVRLSNISPTLSMNGSSNEASNLHPLSMYGGSISPQSNDSGMSDSLGKYVPGSGYGDGMMAQSPSQGGNGPQSALTAAQKELFSQRKQREFTPDNKKDESYWDRRRRNNEAAKRSREKRRYNDMVLEQRVIELTKENHVLKAQLDAIRDKFNISGENLVSVEKILASLPTSEQVLSNTKRAKMSGSGGSSSGSSPSGSGSGEGSPQGGHNGYPVGPPLSPLIYGPNGNARPEATVKSVHHIHHAGVAPPPTHLQQLVVPQSQTQHLYQPQPQQHQPHQQQQISQPPQQQQQQQEPSPSAGSSSPVISDPHNRPPSTTIANLQVQLQQALNRNVRPEDLDSLRKVVAAGALYNAAAVVGAPPPPPSAGLYVPAPSAYKDHLEAAAAWSHNVEAAVSSSAVDAVSSSSVSGSAASVLNLSRRACSPSYEHMLSSTTSSTLSSASSSGAVSGDDEQEHEPAHMAPLQLQRSSPQQGSDANNCLPLKLRHKSHLGDKDAAATALLSLQHIKQEPNCSRASPPAWNDGGDNSSDERDSGISIASAEWTAQLQRKLLAPKEANVVTSAERDQMLKSQLERLESEVASIKMILAE 729
2 -24.500[K] KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors  ali follow..  10  10LAS----SFGKSP-QTPTPTR---LIKNCDEVGLFEDLQHVNPFDIGFQQAAERNVSGTPSRPEARPNDGESLHTPQVYPVEAPTVVSVPSENQ--GDMDVDQLLATTVTSPSKASQDGPPPLQLIQPQVLTWVLPAQSVPISIATVDCNRNRVKPTGAIHPFILPKPTAKELNKTSKRPEPILVSCNPPNNEPSSASLTPTSQLPIKERLKAIIHSNNNRRSFSTPPKAAKAKDRSRDEDCMER---RRAAASRYRNKMRNEHKDLIKQNAQLQQENQELHERISRLEKELQQHRSHSSL............................................................................................................................................................................................................................................................................................................................................................................................................................................ 321
3 -22.100[K] KOG4005 Transcription factor XBP-1  ali follow..  16  1.........................................................................................................................................................MAPTANTVLITVPRTAITSNNLPKLRPAPLTAALLK-VSATPSASPTPSSSGYASSSNMDDDNMAASQPKAKKRRLDHLTWEEKV-----QRKKKNRVAAQTSRDRKKARMEEMDYEIKELTDRTEILQNKCDSLQAINESLLAKNHKLDS......................................................................................................................................................................................................................................................................................................................................................................................................................................... 146
4 -19.700[K] KOG3584 cAMP response element binding protein and related transcription factors  ali follow..  31  266.........................................................................................................................................................................................................................................PQQLAEEA--ELRLKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE................................................................................................................................................................................................................................................................................................................................................................................................................................................ 332
5 -17.500[K] KOG4571 Activating transcription factor 4  ali follow..  11  85......MLEKMDLFDFGALL--------------------GIDDLETMPDDLLTTLDDTCNLFAPLVQETNKVPPQMVNPIGHLPES-----------------LTKPDQVAPFTFLQLLPLSPGVQSSTPDHSFSLELGSEVDITEEDRKPDSTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRGSPNRSLPSPGVLCGSAHPKPYDPPGEKMVAAKVKGEKLDKKL----KKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVARGKKRVP................................................................................................................................................................................................................................................................................................................................................................................................................................... 351
6 -16.700[K] KOG0709 CREB/ATF family transcription factor  ali follow..  16  276.........................................................................................................................................................................................................................................PLTKAEER--IRRKRNKRSAQTSRKRKQDYIEQLEDRVSESTKENQALKQQIERLSSENQSVISQLKKLQAQLGQNAKRTTQAGR------------------------------------------CLLVSPQLSPLGNQDNQKVLECIEEACQPSATSMNSANSAQRAIAGVTAPSVVIPSGGPVMVSTNANRQMNRNAVLNHHNNSKYPASGNQNHHPIALEDLNHPPPTLQPKQSYQQQHQPSMYRRSDETIAMAMAKIGARKGSSTSSSS---------------------------ASSVASSTSTSSATSPIY--------------------RTSRTLGAFEDQCDASSDDSNCANMPSLVPMKMSAQPPKRKIVTMNGQPRVTYRAVPASSVNVEQAQYYKVP-QQKVQYVTMDRPIKYEVLNDYIKMEEESTIRLPNSWSTAG-------PRLHPQVNASSRTVRVATPVHYNGPSAKKIKTQM.. 687
7 -12.400[R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)  ali follow..  10  547.........................................................................................................................................................................................................................................SEGESDPLWLRQKTIQNEGEKE-MRHGFVGDCQLPIACEMFLDAKGTIVRKMCSLF-DYGLIAAETVYK-QGLLSKYAAGQELMQRQREEQLKYWLDVGMHKKQEDPKTLKSPQKPAPPADQASTSSASTSGSGSGSSSMQPPKRMPAHLKRGSAASSPGVQSKGTENGTNGSNSSSSNSKNVAKKSADQPLSTLANTRERRSEYGQKRNVSGSRLAATPASKRKLSSKDVEQAADAPEVLTHSDNAVDVGIIDDECGGFGAVGVMNGVASPVANNSEMDTEAEVEAEPTATKAITIHCQQPVTTPVAAAATANERLPGVAPHRRGPRRADRREEELVASAPGYRCRPSMRGADAGAAAAAAAAPTHPHPHRPPPPPPPQ.................................................................................................................... 955
8 -10.200[U] KOG1091 Ypt/Rab-specific GTPase-activating protein GYP6  ali follow..  11  338.....................................................................................................................................................................................................................................REFLQD-----LVWDEIILADNSARTDEDSRNQN-MILYLRSSLLSTETCCLQIDLNKIIQKAKLLQALVLDTDMLSALSINGVFDQSNFVPARTKSCSTSPRSPLIIAPESYWEKKWRVLHKAEEEENKICLEKQTPPTQKKKRWLNVTKLFRAVIDLSHHKLGIGERKANSSPVTQSLLEDSSEQLNVDCHVTVNKENIHPQETEENIMEFHSADEESIVSGSSPSEESSFVSLDPTSPVRCSTKIENDSVSSAGSNLLPDEDDKSIVSISEENSSVSSDPISPAIDSNYSGKYLDCCTGSENDKDQQTSVNSPLSVSPHRRNEYPVTQSDEDVSTDKSVGITKEYKLLHGIVQWFRKLKRTLSSEETSHRKASDATKTNDVKIKKNQIGCYSESHPQALSSGDSSQNLRKTLKNLGQ------------------SMLKHIEAIE-------LVFQQEPCLVPAGLIGNLAKTNLIEKGQVTATTAELRKLSNLLSE 839
9 -10.200[K] KOG4196 bZIP transcription factor MafK  ali follow..  20  225..................................................................................................................................................................................................................................NRHLRGFTKDEKQ-----RRTKNRGYAQSCR-YKRVQQTQLIQQVEQLKQEVSRLARERDAYKVKCEKLANSGFREAGSTSDSPSSPE............................................................................................................................................................................................................................................................................................................................................................................................................................... 320
10 -10.000[K] KOG4011 Transcription initiation factor TFIID, subunit TAF7  ali follow..  11  68VDLPCVMELKTTFYKTADICQMLVSTVDGDLYPPVEEPVASTDPKASKKKDKDKEKK-----------------------------NHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTDAEAEDETKEAENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLSSSSEDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDNMKGKLQE---------QDRAKRQEDLIMKVENLALKNRLDELKQKEDREKEQLSSLQEELESLLEK............................................................................................................................................................................................................................................................................................................................................................................................................................................... 349
11 -9.100[TU] KOG3895 Synaptic vesicle protein Synapsin  ali follow..  10  546............................................................................................................................................................................................................................................................................................................ANKKRGRTASETSSGSGPGSVPSSAGPGSGFSSSFLGKQFSFAGKGEGVISTQPTQRPSEEPPAIPTTASSAVRPESSVSVSDSRNTDTLTERAGAGYQPVTNYEQQERVNPFDKEPSKSGSAASIHTSSSSSISSSSISSRINRNGNAIQSPPPPAGPPPPPPTNVTAVGSNANSSSGYRNSFSSSLSKDKTSYGNYGSTTSVETITRMDTNTTNIGATATEAGEASGVTAITNISNSDGIVAPTTGTITTSVTTNDWRSAIGMRSASVYSAPAAVTTVLPGDTSGYDSNSIASQGEGLNNPSDLPSYTRPSYSRSESNASKHSDLDVIFGDSKTTPASYGNGKYTRAAGSISDAASKSMSMTSGGVGSGNGSGSGLGGYKIYDSIQNAAFSDFSDSGSMSSIGSHTKRWSASKEEDDELDLK..... 986

FFAS is supported by the NIH grant R01-GM087218-01
1 3 7 5 6 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Veeramalai M, Ye Y, Godzik A. TOPS++FATCAT: fast flexible structural alignment using constraints derived from TOPS+ Strings Model. BMC Bioinformatics. 2008 Aug 31;9(1):35