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Query: [U] KOG3251 Golgi SNAP receptor complex member, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSNTLYNHCTKLFQSIQRSLDELERGVQDESNTISLAGIQGQISASFLSLSRSIDDYDSMVQRELVPAKKKKATIRIQEFRQKHVQLLEKFDELKAHVRDIAQAKNRKELLGRRGYVNSLDSPYGNSTTDAEIVEGPSDLSRQDGLLKEHDFLGRAESQVDEFLERGRMILGDLVEQGSVLKATKTKVLNAANTLGITRHTLSLINRRSKQDKIIFYCGAFLVFVLFYLIYRWLRLast
1 -70.500[U] KOG3251 Golgi SNAP receptor complex member  ali  100  1MSNTLYNHCTKLFQSIQRSLDELERGVQDESNTISLAGIQGQISASFLSLSRSIDDYDSMVQRELVPAKKKKATIRIQEFRQKHVQLLEKFDELKAHVRDIAQAKNRKELLGRRGYVNSLDSPYGNSTTDAEIVEGPSDLSRQDGLLKEHDFLGRAESQVDEFLERGRMILGDLVEQGSVLKATKTKVLNAANTLGITRHTLSLINRRSKQDKIIFYCGAFLVFVLFYLIYRWLR 235
2 -51.200[U] KOG3208 SNARE protein GS28  ali follow..  17  7.WDALRKQARKIEAQLDEQMHSYRRLVSTSKSDGNESDLEAGIDLLLRQLQQVNAQMQAWVSSGGSEMVSHT----LTRHQEILQDLTQEFYRHRSSLRAKQEHASLLE---------------DFREFDRTRLDLEDGYGSEQALIKEHMGINRNTAQMDGVISQAQATLGTLVFQRSTFGGINSKLSNVASRLPTVNTILAAIKRKKSMDTIILSLVAAVCTFLIFIYWIT.. 222
3 -42.900[U] KOG1666 V-SNARE  ali follow..  12  10HFEKLHEIFRGLHEDLQGVPERLLG----TAGTEEKKKLIRDFDEKQQEANETLAEMEEELRYAP-LSFRNPMMSKLRNYRKDLAKLHREVRSTPLTATPGGRGDMKYGIYAV-----------ENEHMNRLQSQRAMLLQGTESLNRATQSIERSHRIATETDQIGSEIIEELGEQRDQLERTKSRLVNTSENLSKSRKILRSMSRKVTTNKLLLSIIILLELAILGGLVKFFR 230
4 -19.400[U] KOG3202 SNARE protein TLG1/Syntaxin 6  ali follow..  5.FYEVKADASNQMEQVRKLYNSFMAARN-----SGVLSPNTELTYAIDELSETLKDLKAAVEIMKNSEHFGLDEEELKSRRRFVSELDIELNNIQLKMGAAPSTPVSTE---------PYTVDNGASAGLSEEDHAVNRQYQEQLYQQQDVMLDGVYDTIGNIRGQAALMGEELGQQADLLDTLDNSIETTNSKLRRGMKRLKDFTIASADSKSGCCITVLIIILIALLVL.... 221
5 -16.000[U] COG5325 t-SNARE complex subunit, syntaxin  ali follow..  58.WVTVEGEIDSLLLNTRRNINLLDKQYAKTEQENEIQRLTIQITQDFQRCQKLLQVTKAQ-TNSATGSEALMAKNFLSNLASRIQTESAQFRKKQSTYLKKLRGLNANISPVESKLDETVSDVAISQSTIQQVALMEEQGEDEQAIRHERA-VAKIAEGIIELAQMFQDLQVLVIEQGALVDRIDFNIEQTQVHAKSAEKELIKAQKNTGRLRFICFLILLIVALIVILAIKLLR 301
6 -15.700[U] KOG0809 SNARE protein TLG2/Syntaxin 16  ali follow..  79.WVDVSEEISVNIQRARTKMAELGKAGDGKEDQHNIESLTQEITFLLKKSEKQLQRLS----ASGPSEDSNVRKNVQRSLATDLQLLSMELRKKQSTYLKRLRQQKEDGMDLEMNLSRNRYRPEEDDFGDMLNEHQMSKIKKSEEVSVEREKIQQVVESVNDLAQIMKDLSALVIDQGTIVDRIDYNIENVATTVEDGLKQLQKTQRHGGMVKCASVLVILCFIMLLLLILKEI. 320
7 -13.900[U] KOG3385 V-SNARE  ali follow..  2................................................................................................................NPRREPRGGRSSLFDGIEEGGIRAASSYSHEINEHENERALEGLQDRVILLKRLSGDINEEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYYL.... 120
8 -13.700[S] KOG2678 Predicted membrane protein  ali follow..  11  2........ATKLNVNIRTLLANCEELAKSEQNFWRLQKFIKSLDTMLAELEKRIPGYLERLQALKISTGYADVPGSTTKTPSQ-NALKEIRQLQNSKYHNELRKELLQDSDALRRRRGADESSSSSGSANVQETSGENMNQAAKYYTNAQEKITEHMLSLTRNLKEQTETANRIRRDTEVVSRSAGMADRNINSLGKEAEKLEQHSKKAYK--WLMIAFVIATFIGMVLFMKIM. 245
9 -13.300[U] COG5074 t-SNARE complex subunit, syntaxin  ali follow..  10  41..SQINRDLDKYDHTINQ-VDSLHKRLLTEVNEEQASHLRHSLDNFVAQATDLQFKLKNEIKSQRDGIHDTNKQAQAENSRQRFLKLIQDYRIVDSNYKEENKEQAKRQYMIIQPEATEDEVEAAISDVGGNANRRGEAKTALAEVQARHQELLKLEKSMAELTQLFNDMEELVIEQQENVDVIDKNVEDAQLDVEQGVGHTDKSARKARKNKIRCWLIVFAIIVVVVVVV.... 281
10 -12.700[U] KOG0810 SNARE protein Syntaxin 1 and related proteins  ali follow..  37......EEIRNSIDKITQYVEEVKKNHSEGKIKEELEDLNKEIKKTANKIAAKLKAIEQSFDQDETSVDLRIRRTQHSVLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTDDELEEMLESGKPSISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMINNIERNVMNATDYVEHAKEETKKYQSKARRKKWIIIAVSVVLVVYRLFGLS... 283
11 -12.700[U] KOG0812 SNARE protein SED5/Syntaxin 5  ali follow..  88.RSRTDLFSGVNFSSAYLSTRECVIVAKRTDPTQEIQELTVVIKQEISALNSALVDLQLFRSSQNDEGNNSRDRDKSTHSATVVDDLKYRLMDTTKEFKDVLTMRTENMKVHESRRQLESSPLLQQSQQQQQQQQQQMVPLQDTYMQGRAEALHTVESTIHELSSIFTQLATMVSQQGEIAIRIDQNMEDTLANVEGAQSQLARYLNSISSNRKIFFVLIAFLMIFLFFV..... 376
12 -12.400[U] KOG0811 SNARE protein PEP12/VAM3/Syntaxin 7/Syntaxin 17  ali follow..  10  26.RQDTTQDVASGIFQINTSVSTFHRLVNTLGTPKDTPELREKLHKTRLYIGQLVKDLKEASETDHQRGVNQKKKIVDAKLAKDFQAVLKEFQKAQRLAAERETVYAPLVHKPSLPSSYTSSEIDVNGDKHPEQRLDNEIAFNEAVIEEREQGIQEIQQQIGEVHEIFKDLAVLVHDQGNMIDDIGTHIDNSYAATAQGKSHLVRHQRHKDQIL...................... 254
13 -11.600[U] KOG3065 SNAP-25 (synaptosome-associated protein) component of SNARE complex  ali follow..  58..ASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQPNNRLKEAISTSKEQEAKYQASHPNLRKLDDTDPVPRGAGSAMSTDAYPKNPHLRAYHQ--KIDSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKVRQL.............................. 258
14 -10.800[U] KOG3894 SNARE protein Syntaxin 18/UFE1  ali follow..  11  45..SPFTKAAFKTLDSIKELELFMLKVDLHRTTEQEKDSIEQEVAAFIKACKEQIDILINSIRNEEANSKGWLGLPAVLILSEKLHSVTAQFDQLRATRFQDIINRAMPRRKPKRVIKEATPINTTLGNSESIEPDEDETQALQVELSNLLDGARQTETKMVEMSALNHLMATHVLQQAQQIEFLYDQSNDDRN-LEAINASVGR............................... 279
15 -10.500[U] KOG0946 ER-Golgi vesicle-tethering protein p115  ali follow..  719..SEGAQMNGIQPEEIGRLREEIEELKRNQELQSQLTEKDSMIENMKSSQTSGTNEQSSAIVSARDSEQVAELKQELATLKSQLNSQSVEITKLQTEKQELLQKEAFAKSVEVQGETETIIATKTTDVEGRLSALLQETKELKNEIKALSEERTAIKEQLDSSNSTIAILQTEKDKLELEITDSKKEQDDLLVLLADQDQKILSLKNK........................... 926
16 -10.300[U] KOG3838 Mannose lectin ERGIC-53, involved in glycoprotein traffic  ali follow..  12  304.............................................................EEDWEEFYESENQRELRQIWQGQSQIADHLRELSRKVDEIIGRQETTLSLVSRNAGQALPPPAAGGVPQQQLPVGAVSRSDVDLLLTNQNMLLSSIREIRQLVGDINVRTDNIQTNQSTGYDVQTLIAEMRDGMNQVKQGITHVGQRLAAPQFLSVTVVQLLLVFIYNVFKNRS 504
17 -10.100[UR] KOG4677 Golgi integral membrane protein  ali follow..  11  271..DEYKNKAQKILTAKEKLVESLKSEQGIGSSDRPVHLLQAEVEEQVYTLRSDMEELEAQIRDLQSQLSDRTHLEEKQTWDSTIGLLNEKVECSRIENEFTKQEMKRQGDQHQSKMLEKENELRKTISDLRSRMRDEQTKQEDDGSSQLTDLLLQKQQQLEDVLRNNQVLNVRLERLQKATNRETPQTRNALHTVDSTAFKLLSMLRGHPSARLFFVLYFIIMHLWLFFIV.... 543
18 -9.330[R] KOG1842 FYVE finger-containing protein  ali follow..  333...QQYDLMKVMIEEVKNLVPTYVRVVTSLKNGESVYSHKEELRSKCLEIQKSIDYVSKKIAEGANDKPNSAKEQQLRKLQGLIGQMESECSNLIIKRKERRAKDFARVNRTVMKMSSSMPQLQEQHSHLNSTSSVSSFGGPSSIDDGWSAEDNDLVFEPSSIEDDTIQTDHPLYEQREQLRKATGKLDEMDILERNLKEIEEEMMR............................ 558
19 -9.240[P] KOG2662 Magnesium transporters: CorA family  ali follow..  10  166..LSLDAQVNELEMEVYPVLDELATNISTLN-KGRLLTLTQKVQKVCDEIEHLMDDDDDMAEMYLTEKKERAEAHASEELEDNIGDFESSGIVSKSAPVSPVGSTSGNFGKLQRAFSSIVGSHKSLLSSSSIGENIDQLEMLLEAYFVVVDNTLSKLSSLKEYIDDTEDLINKLGNVQNQLIQFQLLLTAATFVAAIFANLQDSVFQNPTTFQYVLLITGIGCGFLYFGFVLYFK 414

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 0 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30.