FFAS03 results for KOG3455

Query: [S] KOG3455 Predicted membrane protein, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140`
#	Score	Template	Links and tools	%id	First	`MSRFLNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNLVNGLQARTFGIWTLLSSVIRCLCAIDIHNKTLYHITLWTFLLALGHFLSELFVYGTAAPTIGVLAPLMVASFSILGMLVGLRYLEVEPVSRQKKRN`	Last
1	-99.200	`[S] KOG3455 Predicted membrane protein`	`ali`	100	1	`MSRFLNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNLVNGLQARTFGIWTLLSSVIRCLCAIDIHNKTLYHITLWTFLLALGHFLSELFVYGTAAPTIGVLAPLMVASFSILGMLVGLRYLEVEPVSRQKKRN`	140
2	-9.200	`[I] KOG3845 MLN, STAR and related lipid-binding proteins`	`ali follow..`	15	22	`........KRFIVITFFDTSITILLWLLCTVTRDDDWDKVFFNEINIFNPKFIRI-IVLLAVLRLGVVYGICLVKQWYTVAFTTLASSAYILMKVLFYFNHSSSAVPPLLLIITSFTLCWSEFYLMPFQILPRERRYARR`	159
3	-7.570	`[C] COG0356 F0F1-type ATP synthase, subunit a`	`ali follow..`	10	191	`..............................................SLAFRLFG--NMYAGELIFILIAVMYMANNFALNSMGIFMHLAWAIFHILV--------ITLQAFIFMMLTVVYL...................`	255
4	-7.230	`[S] COG4331 Predicted membrane protein`	`ali follow..`	8	44	`...........TYFVTPQFLLNTLHRITSRGDIIANYLLHAAQHLSISSLHFAASYLFIHGAIKLWIIIGLKKLGYYPVAVAVFSLFIVYQLYRYTFTHSLLL-------ILITILDVFVIALTLLEYRRLRHGEKTCSE`	173
5	-7.010	`[U] KOG2887 Membrane protein involved in ER to Golgi transport`	`ali follow..`	10	130	`...........CFTLGCGFIIGSFFALRGPQNQLAHMSSAERLPLTLGF--------IATMVGTIYVSMVLHSYILSVIFSALQVIALAYYCISYFPGGSSGMK....................................`	214
6	-7.000	`[O] COG5264 Vacuolar transporter chaperone`	`ali follow..`	16	125	`...............................................ANERTFLKW-LHVVVLLGSLALALYNGQAFGVVYTLLAIFIGFYAWKLHAKRSQMIKSDYWGPLIVGTALAISLIVNMSFALKDAVYQNLIEP`	229
7	-6.900	`[U] COG5102 Membrane protein involved in ER to Golgi transport`	`ali follow..`	12	102	`...........LWTMGSLLAVLGFAIVQGFVAHFRQLTTMERLPITLSY--------FVTLLATIIATIKIKSTILSIVFGVLHILSFVAYLIAFFPFGTRTVS....................................`	186
8	-6.410	`[S] KOG4556 Predicted membrane protein`	`ali follow..`	11	4	`........RWLLSLLLATWTLLSIA---------RLVFDLIGNLWVVVVFDFV---QIVLLISGLFGATQKRRPLLYTLLSSNALSVTINVLIFLWYIGVFGEISRPYLSAGLPYSSSFFL...................`	104
9	-6.370	`[H] KOG3810 Micronutrient transporters (folate transporter family)`	`ali follow..`	12	27	`.......RECWFLPTALLCAYGFFASLRPSEPFLTPYLLGPDKNLTEVFNEIYPVWTLVLLFPVFLATDYLRYKPVVLLQGLSLIVTMLLYAQGLLAIQFLEFFYGIATATEIAYYSYIYSVVDLGMYQK..........`	156
10	-6.230	`[R] KOG2489 Transmembrane protein`	`ali follow..`	21	539	`........RGWYSWV-LNMLYGYLLMFGFITMTPQLFINYKLKSVAHLPWRML-TYKFINTFIDDLFAFVIKMPLLYRIGCFRDDIIFLIYLYQRWIYRV........................................`	628

FFAS is supported by the NIH grant R01-GM087218-01

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