FFAS03 results for KOG3472

Query: [S] KOG3472 Predicted small membrane protein, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180`
#	Score	Template	Links and tools	%id	First	`MSVADTIEYVTLGNPVSKMVASSASALLRTLGLRPKKVPVQETSMAVLPAAHSYAHSHGSLYRLAGCHYHFIRLAGIVGASAIFMGAYCKYVLKDVSDPKEQVDSQAFADVANRIHFLHSFAMMAMPLAHYPVFTGTLMITGMMLFSGCMYYRALTGEKRLQPYATVGGFCLMAAWLSLVL`	Last
1	-95.100	`[S] KOG3472 Predicted small membrane protein`	`ali`	100	1	`MSVADTIEYVTLGNPVSKMVASSASALLRTLGLRPKKVPVQETSMAVLPAAHSYAHSHGSLYRLAGCHYHFIRLAGIVGASAIFMGAYCKYVLKDVSDPKEQVDSQAFADVANRIHFLHSFAMMAMPLAHYPVFTGTLMITGMMLFSGCMYYRALTGEKRLQPYATVGGFCLMAAWLSLVL`	181
2	-65.400	`[S] COG2363 Uncharacterized small membrane protein`	`ali follow..`	20	2	`..................................................................TSRFMLIVAAISGFIYVALGAFGAHVLSKTL----GVVEMGWIQTGLQYQAFHTLAIFGLAVAMQRYWSSVFLALGTVLFSGSLYCLALSHLRLWAYITPVGGVSFLVGWALLLI`	118
3	-7.580	`[I] KOG1639 Steroid reductase required for elongation of the very long chain fatty acids`	`ali follow..`	11	125	`..................................................................................IAAGCYTVHYVKRLLESHATMPLRNLFKNCTYYWGFTAYVSYHVNHPQFTSPCMCTVWGALGAFALCELGIALRNLRPPGT-NPLTKLF-IGAWVSFSV`	254
4	-7.420	`[S] KOG3097 Predicted membrane protein`	`ali follow..`	9	6	`.................................NAGFENDEPVKPKAGFEPDTASLREKVVLNPGEKWRILKNISIISIAFMVQFTAFQG--TANLQSSINAKDGLGTVSLSAIYAALVVSCIFLPTLIIRKLTVKWTLVCSMLCYA--PYIAFFPRFYTLVPAGILVGMGAAPMWAS...`	148
5	-7.340	`[C] KOG1563 Mitochondrial protein Surfeit 1/SURF1/SHY1, required for expression of cytochrome oxidase`	`ali follow..`	12	4	`LGARSTYRWFSIAASIPTKNAIGKSTYLLASRNQQYR-GIITSTVDWKPIKTGKSPNDDSRRERSFGKKIVLGLMFAMPIISFYLGTWQVRRLKWK------TKLIAACETKLTYEPI-PLPKSFTPDMCEDWEYRKVILTGHFLHNEEMFVRKKNGEKGYFLFTPFTGEKVLIGWI....`	180
6	-7.190	`[C] COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)`	`ali follow..`	17	20	`.........................................................................LIYAGVVVLLMLVGLVIHALLRRMLAPKTAHRDYLYSLAIR--RWHWGNALLF----------------LLLLSGLFGHFSLGPVALMVQVHTWCGFALLAFWVGFVL`	114
7	-6.920	`[P] KOG3713 Voltage-gated K+ channel KCNB/KCNC`	`ali follow..`	8	261	`.........................................................................LAILPFYVSLTLTHLGARMVQQAVQALRIMRIARIFKLARHSSGLQTLTYALKRSFKELGLLLMYLAVGIFVFSALGYTMEQSHPETYGDIYPNAAISFLCGVIAIAL`	400
8	-6.860	`[P] KOG4390 Voltage-gated A-type K+ channel KCND`	`ali follow..`	12	172	`........WRAFENPHTSTMALVFYYVTGFFIAVSVIANVVETVPCGSSPGHIKELPCGELAAAPSRYRFVRSVMSIIDVVAILLVMTDNEDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASYGDMVPFGSICSLSGVLVIAL`	400
9	-6.680	`[R] KOG3656 FOG: 7 transmembrane receptor`	`ali follow..`	15	90	`......................................................................LITLLTIAGNCLVVISVCFVKKLR----------------QPSNYLIVSSVAVAVMPFVSVTDLIGGKWIFGMCCTASIMTLCVISIDRYLGITRPL--KMILSVWLLSAS`	212
10	-6.510	`[J] COG2264 Ribosomal protein L11 methylase`	`ali follow..`	12	152	`............................................................LDSLDLQDKTVIDFGCGSGILAIAALKLGANAEQNGVADRLQLFLSEDKPADLKADVVVANILAGPLKELYPVIRQLVKPNGVLGLSGILATQASSVCDAYAQSFVLEPVEEREEWCRITG`	290

FFAS is supported by the NIH grant R01-GM087218-01

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