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Query: [P] KOG4408 Putative Mg2+ and Co2+ transporter CorD, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAAMETETAPLTLESLPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRRHCKKYWLISEEEKTQKNQCWKSLFIDTYSDVGRYIDHYAAIKKAWDDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPDDYRCSYRIHNGQKLVVPGLLGSMALSNHYRSEDLLDVDTAAGGFQQRQGLKYCLPLTFCIHTGLSQYIAVEAAEGRNKNEVFYQCPDQMARNPAAIDMFIIGATFTDWFTSYVKNVVSGGFPIIRDQIFRYVHDPECVATTGDITVSVSTSFLPELSSVHPPHYFFTYRIRIEMSKDALPEKACQLDSRYWRITNAKGDVEEVQGPGVVGEFPIISPGRVYEYTSCTTFSTTSGYMEGYYTFHFLYFKDKIFNVAIPRFHMACPTFRVSIARLVSLast
1 -121.000[P] KOG4408 Putative Mg2+ and Co2+ transporter CorD  ali  100  1MAAMETETAPLTLESLPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRRHCKKYWLISEEEKTQKNQCWKSLFIDTYSDVGRYIDHYAAIKKAWDDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPDDYRCSYRIHNGQKLVVPGLLGSMALSNHYRSEDLLDVDTAAGGFQQRQGLKYCLPLTFCIHTGLSQYIAVEAAEGRNKNEVFYQCPDQMARNPAAIDMFIIGATFTDWFTSYVKNVVSGGFPIIRDQIFRYVHDPECVATTGDITVSVSTSFLPELSSVHPPHYFFTYRIRIEMSKDALPEKACQLDSRYWRITNAKGDVEEVQGPGVVGEFPIISPGRVYEYTSCTTFSTTSGYMEGYYTFHFLYFKDKIFNVAIPRFHMACPTFRVSIARLVS 415
2 -50.300[P] COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport  ali follow..  36  1.....................................................................................................................................................................................................................................................................................MINSPRVCIQVQSVYIEAQSSPDDERYVFAYTVTIRN----LGRAPVQLLGRYWLITNGHGRETEVQGEGVVGVQPRIAPGEEYQYTSGAVIETPLGTMQGHYEMI--DENGDAFTIDIPVFRLAVPTLI........ 124
3 -22.300[G] COG4282 Protein involved in beta-1,3-glucan synthesis  ali follow..  19  123..........................................................................................SLPPPVSESWRRIDRWAEENYYELYCQLCYGATVADVDSLEYELECTLPRDVRESLYIHDGQD-QPTGILFGVTLLDIEEIEEESELWRRPGAVQCVYAHPGWIPLAKD-FVGNNIAIDLAPGPAGQWGQVILFGRDQ-------DTKYVVARSWADFLAIVAYDMENGKWLVDEDD.................................................................................................................................................... 319
4 -17.900[R] KOG0274 Cdc4 and related F-box and WD-40 proteins  ali follow..  21  19NRDHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRTAFFHHFAGDQSQSPLGNGTWRQEYLLRST........................................................................................................................................................................................................................................................................................................................................... 104
5 -13.600[E] KOG3926 F-box proteins  ali follow..  25  240TAADADDESALTFFDLPREIVLLILRRLDHNSLLETAQVHEALQDINGEDKIWKSLCTFHFQEYQIKQKTSGKSWRQAFFDLKK........................................................................................................................................................................................................................................................................................................................................... 326
6 -12.900[R] KOG2997 F-box protein FBX9  ali follow..  13  170....ELESSQIHISVLPMEVLMYIFSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERP-------------------------RVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRT------------------------------------------------------------------------------NTRTDAILLGHYRLSQDTDNQTKVFAVITKKKEEKPLDYKYRYF-RRVPVQEADQSFHVGLQLCSSGHQRFN---KLIWIHHSCHITYKSTGETAVSAFEIDKPLFARVRSYTAFSERPL.............................................. 437
7 -10.500[U] KOG3745 Exocyst subunit - Sec10p  ali follow..  18  18LERRHKQQFKALFGCLTINIYLKIFTLISTPDLCNCRLVCRKFQQLCDYNSIYVKKLLL.................................................................................................................................................................................................................................................................................................................................................................... 76
8 -9.550[R] KOG1777 Putative Zn-finger protein  ali follow..  30  151.EAVEEEDQQDHINRLPEELLLKVFSFLPDKSLLACSSVSYRFNQISNSHEVWKELYCNLY.................................................................................................................................................................................................................................................................................................................................................................. 210
9 -8.880[BT] KOG2130 Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain  ali follow..  13  1MTTLGQRDRRPSLSVLPDETICVLLEYLAPRDIAHLACVSSVMYILCNEEPLWMSLCLRRAKGPLEYKGFMSLYLYKRFYRCNTSLDGFSFDNGNVER-----------------------RRNISLDEFSKEYDAKKPVLLS--------------------GLADSWPASNTWTIDQLSEKYGEVP-------------------FRISQRSPNKISMKFKDYIAYMKTQRDEDPLYVFDDKFGEAAPELLKDYSVPHL--------------------------FQEDWFEILDKESRPPYRWLI-ASWHVDPALTSAWNTLLCGKRWALYPP-------------GKVPLGVTVHVNEDEGDVSIDTPSSLQWWLDYYPLLADEDKPIECTLLP-TIYVPSCILNLEPTVA 330
10 -8.170[S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb proteins  ali follow..  11  74NSYLKPMLQRDFITALPEQIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRC-----RHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSA-------------------SGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRL----WDIECGAGHEELVRCIRFDNKR-IVSGAYDWDLQAALDPRAPASTLVEH-RVFRLQFDEFQIDDTILIWDFLNVPPSAQNE.... 495
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.