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Query: [S] KOG4455 Uncharacterized conserved protein, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNRVKTTQSKTGEIIAYSEGAIRNNISAVEYCRTSMAAISGCAAGILGLSGTLGFLFYFLSVFVLWILVLVKSGTQWRKFFINRRNLLTNQFMGGLCTYVLFWTFLYGMVHVYLast
1 -74.100[S] KOG4455 Uncharacterized conserved protein  ali  100  1MNRVKTTQSKTGEIIAYSEGAIRNNISAVEYCRTSMAAISGCAAGILGLSGTLGFLFYFLSVFVLWILVLVKSGTQWRKFFINRRNLLTNQFMGGLCTYVLFWTFLYGMVHVY 113
2 -10.800[S] COG2839 Uncharacterized protein conserved in bacteria  ali follow..  17  82.................................GQIGAFVGLVLGFFGLLPALPFG-ILFGPLLGAIVGEYIYRREFWLAVKAGIGIVVGTLVGNLIQGVL............ 153
3 -7.300[I] KOG3845 MLN, STAR and related lipid-binding proteins  ali follow..  15  45TRDDDWDKVFFNEINIFNPKFIRISLFDIVLLAVLRMLILGVVYGICLVKQ---WYTVAFTTLASSAYILMKV------FYFNHSSSAVPPLLLIITSFTLCWSEFYLM.... 145
4 -7.210[S] COG3216 Uncharacterized protein conserved in bacteria  ali follow..  18  38.........................KRILRLNATPTAVAAGVAAGV-----FASFFPLGSHFAIAAIVCWLISGNMV--------AGLGTFVFGNPLTLPFVVGATWET.... 109
5 -7.100[S] COG4331 Predicted membrane protein  ali follow..  12  1MLKMKNRFSSKNLFGEKNVHAVFELSLLLKASLAMMEIIAGVLTYFVTPQFLLNTLHRITQVSFIE---------SRGDIIANYLLHAAQHLSISSLHFAASYLFIHGAIKL. 103
6 -6.880[G] KOG0449 Succinate dehydrogenase, cytochrome b subunit  ali follow..  15  48NGRVSKSDLWSSNKEEELLVSQRKKRPILTVYEPEMSWYLSSLHRISGVLLALGFYAFTITLGVTTIMGMDTTFQDLNKWYHEKMPKWSQWVAKGSAAYLFAFHFGNGIRHLI 163
7 -6.870[G] COG4993 Glucose dehydrogenase  ali follow..  13  2..................AENNARSPRLLVTLTALFAALCGLYLLIGGLVAIGGSWYYPIAGLVMLVVAGLLWRSKRAALW----------LYAALLLATMIWGVW....... 81
8 -6.560[O] COG5264 Vacuolar transporter chaperone  ali follow..  8  103.IKKPEIPLRVSGPIKVEAKVWLANERTFLKWLHVVVLLGSLALALYNSAGAFGVVYTLLA-IFIGFYAWKLHAKRSQMIKSRSPAPMTDYWGPLIVGTALAISLIVNMS... 215
9 -6.450[S] KOG3462 Predicted membrane protein  ali follow..  12  1MNMTVDPRRKEKINRYKAPKNQGQSGGANEDMMPDYMNILGMIFSMCGLMMKLKWCAWFALYCSCISFASSRASDDAKQVLSS----FMLSVSAVVMSYL............. 96
10 -6.380[E] KOG1287 Amino acid transporters  ali follow..  9  20SQSQVEEDVSSPPQRSSETMQLKKEISLLNGVSLVVGNMIG--SGIFVSPK-MSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILEAFGGFIAFIRLWVSLLVV.... 135
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.