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current user: public |
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Query: [S] KOG4559 Uncharacterized conserved protein, from COG1018 |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . | |||||||
# | Score | Template | Links and tools | %id | First | MDKPTTSAAAAAAQDSNLLPDSPQHGPTLSSASSFEALTRHDPNLSRLATKMFNKTEEYITHELNAPLEDYKLLEEMNKATIAKYKDMRQIAENLNTSTSELSLKFQQLAPMMQQIDEISDTVDKLEAAAYKLDAYSI | Last |
1 | -52.400 | [S] KOG4559 Uncharacterized conserved protein | ali | 100 | 1 | MDKPTTSAAAAAAQDSNLLPDSPQHGPTLSSASSFEALTRHDPNLSRLATKMFNKTEEYITHELNAPLEDYKLLEEMNKATIAKYKDMRQIAENLNTSTSELSLKFQQLAPMMQQIDEISDTVDKLEAAAYKLDAYSI | 138 |
2 | -7.570 | [S] KOG4832 Uncharacterized conserved protein | ali follow.. | 20 | 96 | ...PQVTVTQSCVKGSDLDPEEPIKVEEPEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQIN-DVIKEINKAVISKYKILHQPKKSMNSVTRNLYHRFIDEETFIVEADIKEFTTLKADKKFHVL..... | 231 |
3 | -7.540 | [S] COG3165 Uncharacterized protein conserved in bacteria | ali follow.. | 15 | 99 | .......................................QGDIQVVQNFVALADLAEFDPAELLAPYTGDIKAMRGGAKFLHHGIKRQQRYVAEAITEEWRMAPGPLEVAWFAEETAAVERAVDALTKRLEKLEA... | 200 |
4 | -7.470 | [O] COG5110 26S proteasome regulatory complex component | ali follow.. | 15 | 1 | MVDESDKKQQTIDEQSQISPEKQTPNKKDKKKEEEEQLSEEDAKLKTDLELLVERLKE--DSSLYEAS-----LNALKESIKNSTSSMTAVPKPL-----------KFLRPTYPDLCSIYDKWTDPNLKSSLADVLSI | 121 |
5 | -7.310 | [R] COG4768 Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain | ali follow.. | 10 | 32 | .......................................................................QTMDEVAKSLEKITVEVQGITGQSQKLLDKTNTLLEDVNGKVAKVDPVFDAVGDIGTSLLGLSQ... | 95 |
6 | -7.310 | [S] COG5293 Uncharacterized protein conserved in bacteria | ali follow.. | 7 | 326 | ..........................................EEVEIFHRRLIENRREFLGSEIKRLRRDLVSRENFIREKSNERAELLEVLKTLQEIYLDNVANLNEINKRIEELKQFEEERSSLKIEKELLLQ... | 427 |
7 | -7.210 | [K] KOG2434 RNA polymerase I transcription factor | ali follow.. | 11 | 1 | MAAPLLHTRLPGDAAASSSAVKKLGASRTGISNMRALENDFFNSPPRKTVRFGGTVTEVLLKYKKGETNDFELLKNQLLDPDIKDDQIINWLLEFRSSIMYLTKDFEQLISIILRLPWLNRSQTVVEEYLAFL..... | 133 |
8 | -6.590 | [U] KOG3894 SNARE protein Syntaxin 18/UFE1 | ali follow.. | 19 | 200 | ..............................................................AQPRRLQQQQLLDDETQALQVELSNLLDGARQTETKMVEMSALNHLMATHVQQIEFLYDQSNDDRNL......... | 270 |
9 | -6.550 | [S] COG2960 Uncharacterized protein conserved in bacteria | ali follow.. | 7 | 20 | ..........................................EQIARQVHESMPKGIREFGEDVEKKIRQTAQLTRLDLVSREEFDVQTQVLLRTREKLALLEQRSSELEARNNSVAD.................... | 97 |
10 | -6.520 | [S] KOG4514 Uncharacterized conserved protein | ali follow.. | 9 | 208 | ...................................SDIELEAQYLASSVDNLMENLGNLLHSISSITADNVEVHRNAVNKLTDTLDANIKCQYQLLAKAEEITKSMKPTEQLGQRIRQIKRLVDMLDSTM........ | 302 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30. |