FFAS03 results for KOG4619

Query: [S] KOG4619 Uncharacterized conserved protein, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220`
#	Score	Template	Links and tools	%id	First	`MISSPARLAFAMIGRASSRTLLTNHSVTSIRLSTTAAFKHLDKLIIETPNDAMEIASRLTIIEQQMLKSALDDCLTKKEDGKVEELTQEQVKGIFLVNSIPFIGFGVLDNMIMILAGEYIDQKLGAVLAISTMAAAALGNLISDIAGVGLAHYVEVAVQRVGIKHPVLTSQQLDSGKARFTTNAARAAGLTVGCLLGMFPLLFFSDDEDDEKKKKKELKATKLE`	Last
1	-84.300	`[S] KOG4619 Uncharacterized conserved protein`	`ali`	100	1	`MISSPARLAFAMIGRASSRTLLTNHSVTSIRLSTTAAFKHLDKLIIETPNDAMEIASRLTIIEQQMLKSALDDCLTKKEDGKVEELTQEQVKGIFLVNSIPFIGFGVLDNMIMILAGEYIDQKLGAVLAISTMAAAALGNLISDIAGVGLAHYVEVAVQRVGIKHPVLTSQQLDSGKARFTTNAARAAGLTVGCLLGMFPLLFFSDDEDDEKKKKKELKATKLE`	224
2	-9.210	`[T] KOG2289 Rhomboid family proteins`	`ali follow..`	16	114	`..........................................................................................LSCMWLHAGIIHLLTNML---SLIFIGIRLEQQFGFIVGLIYLISGLGGSILSALFGLLGAMLSELLTNWTIYANKAIIAINLALGMLPRVDNFAHIGGFLTGFCLGFVLLVRPQYGWEASRTNTSRTKRKYS.`	266
3	-8.890	`[T] KOG2290 Rhomboid family proteins`	`ali follow..`	19	657	`..........................................................................................WLSLFLHAGILHCLVSIC---FQMTVLRDLEKLAGWHIAIIYLLSGVTGNLASSQFGILACLFVELFQSWQILARPAVVLFLFTFGLLPWIDNFAHISGFISGLFLSFAFLPYISFGKFDLYRK..........`	800
4	-8.180	`[S] KOG4473 Uncharacterized membrane protein`	`ali follow..`	9	2	`........................................................................ESNNNNLNLDMEKDQETTFDYSKRAQWLRAAVLGANDGLVSTAS--LMMGIGAVKQDVRIMLLTGFAGLVAGACSMAIGEFISVYSQY--MKRESGGETKKEKLPSPTQAAIASALAFTLGAIVPLLAAAFVKEYK................`	139
5	-7.610	`[T] KOG2980 Integral membrane protease of the rhomboid family involved in different forms of regulated intramembrane proteolysis`	`ali follow..`	12	187	`..........................................................................................IGSAFSHQEFWHLGMNML---ALWSFGTSLATMLGASNFFSLYMNSAIAGSLFSLWSLGASGALFGVLGCFSYLFPHAAGCALRWGSFDYAAHLG-------GSMMGVLYGWYISKAVEKQRQRRLQ.......`	340
6	-7.420	`[M] COG1970 Large-conductance mechanosensitive channel`	`ali follow..`	13	1	`........................................................................................................MSIIKEF-FAMRGNVVDLAVGVIIG------AAFGKIVSSLVADIIMPPLGLLIGGIDFKQFAVTLRDAQGDIPAVVMHYGVFIQNVFDFLIVAFAIFMAIKLINKLNRKKEEPAA....`	111
7	-7.310	`[C] KOG3196 NADH:ubiquinone oxidoreductase, NDUFV2/24 kD subunit`	`ali follow..`	16	2	`............LTNCASKTLAAVRANIRAIATSSARASDNLFVHRDTPEDNPNIPFEFTAENKKRVEAILSIYPEGHKRG----------------AMIPLL-YGWLPISAMHKVAEILQLPNMRVYEVATFYTKPTGKYHIQVCT-GSDDILETCKKQLGIGVGDTTKD-------------RKFTISEVECLCVNAPMVAINDDYYEDLTSKD........`	193
8	-6.950	`[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)`	`ali follow..`	21	139	`..........................................................................................FTHIFMHFSLMHILFNLL---WWWYLGGAVEKRLGVITVISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIMANGAHIAGLIVGLAMAFV.........................`	267
9	-6.770	`[MU] COG0597 Lipoprotein signal peptidase`	`ali follow..`	12	56	`......................................................................................................AAFSFLADTLVVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLAD-----------------TAICVGAALIVLEGFLPSKAKKQ..............`	164
10	-6.770	`[S] COG0398 Uncharacterized conserved protein`	`ali follow..`	12	56	`..........................................................................................IQSYGALAAVVSFLLMILQAIAAPLPAFLITFANASLFGSLSWTSSMAGAALCFFIARVMGEVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLSYAAGLTIATGLGQLPATIV....................`	191

FFAS is supported by the NIH grant R01-GM087218-01

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