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Query: [S] KOG4823 Uncharacterized conserved protein, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPSRRGGGGTTKRKHSLGNLRRAHPASGATWNVQVVRGKMSSKCLWHACRALILGLTLMLLGAGMATLGYYADHLSMGSELRGNVTVRVKNDLKGFHLNNFAYVGPIVMGFGGFIVVASCVMTFEARDSAAKVVPARLRAGGGGSSKNPSRSNQGSSASQRRGMGAQYQSSRWDQHFGVFRSSPGDPHQQPQTACISTTHPHQHSHPQQPFDREALTAELVQFSSASNRFCPQWRRLSGAGSAPDLSGSHAHANTTNSTNATNHQNPTTTVTTNYYNLLSLNRLSPLDWELYCSHRRHRRHHHRHSHHHHHHHHKSSSSSVRRVRPVRPGLGAGSQPSGGGGGGGGGGAGSSSSARIISNSSSLIQRATRECSLLQPPAASRVYWQASSFDGGSNHPPGLGMSSGAEKRSERNKRSDTAKRHVLSRQRPIEQEEARDHSRSPLGHRRNSTMSDSSYSGRWTARCASMASRTSSIESRRVQVDLHSPEVMPKSILRSPKRYSSGPSATPSVEKEFRSQLSVCSEPPPPVRQLSGQSSMEPAVPEESLDQSEEQEETTQPKASYEEITELQHHTSSLPPKKARPGFLPLARSEQEEDPRPVANPLYRSNSSRQFYRPKKGVPNERDDSVFYIRSMERGLAENGGCGSADEQRYDSLRVINERRTTLLKADSQGSLGSAERKLSSFSLKMPEITERENSIEIEIDADELHPSTPPSPPPPPTQPGNSHTTESIQDQDPLast
1 -154.000[S] KOG4823 Uncharacterized conserved protein  ali  100  1MPSRRGGGGTTKRKHSLGNLRRAHPASGATWNVQVVRGKMSSKCLWHACRALILGLTLMLLGAGMATLGYYADHLSMGSELRGNVTVRVKNDLKGFHLNNFAYVGPIVMGFGGFIVVASCVMTFEARDSAAKVVPARLRAGGGGSSKNPSRSNQGSSASQRRGMGAQYQSSRWDQHFGVFRSSPGDPHQQPQTACISTTHPHQHSHPQQPFDREALTAELVQFSSASNRFCPQWRRLSGAGSAPDLSGSHAHANTTNSTNATNHQNPTTTVTTNYYNLLSLNRLSPLDWELYCSHRRHRRHHHRHSHHHHHHHHKSSSSSVRRVRPVRPGLGAGSQPSGGGGGGGGGGAGSSSSARIISNSSSLIQRATRECSLLQPPAASRVYWQASSFDGGSNHPPGLGMSSGAEKRSERNKRSDTAKRHVLSRQRPIEQEEARDHSRSPLGHRRNSTMSDSSYSGRWTARCASMASRTSSIESRRVQVDLHSPEVMPKSILRSPKRYSSGPSATPSVEKEFRSQLSVCSEPPPPVRQLSGQSSMEPAVPEESLDQSEEQEETTQPKASYEEITELQHHTSSLPPKKARPGFLPLARSEQEEDPRPVANPLYRSNSSRQFYRPKKGVPNERDDSVFYIRSMERGLAENGGCGSADEQRYDSLRVINERRTTLLKADSQGSLGSAERKLSSFSLKMPEITERENSIEIEIDADELHPSTPPSPPPPPTQPGNSHTTESIQDQDP 735
2 -9.090[T] COG1966 Carbon starvation protein, predicted membrane protein  ali follow..  19  2..........................PGFTMD----TKKLFKHIPWGAF-ALRRGLWIVVASVSVYLVAYYSLYIAQKLDPTRATPAVINNDGLNYHFAAIAGAGPLVMGYGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGPVPGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 168
3 -8.170[PT] KOG1306 Ca2+/Na+ exchanger NCX1 and related proteins  ali follow..  22  47........................................AKPCVWQWFRAIVIALAYLFFGVSIVADRFMAEVITSQQKSHFTIMVRVWNET----VSNLTLLGPTIVGSAAFIIIAVCIMAIPNGETR-RV.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 194
4 -7.440[O] COG2020 Putative protein-S-isoprenylcysteine methyltransferase  ali follow..  15  77..................................................MGWIGTLIELLFLSHKQLGNWSVSLDIRREHK------LVTDGLYRYVRHPMYLSFWLWAIAQFFLLAGLLGVAEYSSRIGRIIP........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 191
5 -7.190[I] COG0575 CDP-diglyceride synthetase  ali follow..  13  170...........................GKSLGKHKMAPAVSPNKTIEGL-AMLVGYWVLLIILLTVVISVLGDLVESMFKRVSG----IKDS------------SNIIPGHGGIL---------DRIDSLTAAFPV....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 272
6 -7.100[I] KOG4142 Phospholipid methyltransferase  ali follow..  17  110..................................................VQGIAKLIFCFGSVLVKLGYLGDYFGFLLPE------RVSGFPFNV-NDNPMYNGSTLCFLSGLLLTLEVFFVYE-EPFTAKIYAARDSKQAKKS.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 220
7 -6.780[R] KOG4314 Predicted carbohydrate/phosphate translocator  ali follow..  19  1...................MAASHPRNSQQ-NVGKRRGKDGKR--W---SPLAVGV-ITVTGVIQSDVG--SKRFSLPSV--GNQPALLHEKTCHQYMNNLAFGDPVITGLGSFVVIKMSVMDELLLDLFHKLTSGRQLAAGNGLCGISHKEQEVPPDHQSLDVNQEPTAPVHTVASVDNCPHCLSPKIPLLLFLNFKTKDPQEFVDTELRDRTDQQPR.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 244
8 -6.640[R] COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase  ali follow..  18  199...........................GKSLGKIKVTPKVSPNKTLAGL-TMLLAAIFLGAGVIIGLSGFCGD-VVMSAIKR---DFGVKD------------SGKLLPGHGGIL---------DRLDSLIYTAPL....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 299
9 -6.530[K] KOG2746 HMG-box transcription factor Capicua and related proteins  ali follow..  25  728........................AVPGESWAVSLLRAPVTMNC-----------------GT------F-----------------------RAFHFSNSSYLGP-ACGLGG---VHAPLLSPEGLDSEAKKLP........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 815
10 -6.430[P] COG2116 Formate/nitrite family of transporters  ali follow..  21  2...............EHNQFDSLLPPQMAERAAITGEGKAKKAAYKSFLLAISAGIQI-LLGGLAFSLGLILVVITGGELFTSSVLILVAKASGKISWKELNLCGSIILGL-NILVCLAVWMTFSARSLTDKVM......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 192
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 3 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Erlandsen H, Godzik A. HEPN: a common domain in bacterial drug resistance and human neurodegenerative proteins. Trends Biochem Sci. 2003 May;28(5):224-6. Review.