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Query: [S] COG0011 Uncharacterized conserved protein, from COG1018

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPKVTVSIKVVPAVEDGRLHEVIDRAIEKISSWGMKYEVGPSNTTVEGEFEEIMDRVKELARYLEQFAKRFVLQLDIDYKAGGITIEEKVSKYRLast
1 -5.270IDP05084 putative ATP-dependent DNA helicase (together with adjacent 3 orfs) [Escherichia coli O157:H7 EDL933] Z4803 [Escherichia coli O157:H7 str. EDL933]  ali follow..  10  40.......LVVQRTGWGKSAVYFIASKIFRDRGAGPTIIISPLLALMRNQVAAAERL...................................... 88
2 -4.840IDP90294 eukaryotic translation initiation factor 2 alpha subunit, putative [Toxoplasma gondii ME49] TGME49_113230 [Toxoplasma gondii ME49]  ali follow..  16  34.................DVEDLVMVKVNRIADLGAYVSLLEYNN-MEGLMSELSK-FRSVNKLIRVGRHEVVMVLRVDPKKGYIDLSKR..... 107
3 -4.710IDP90772 gene: pheA; chorismate mutase/prephenate dehydratase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0316 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  17  117....................ANIEDVFKELSNKEAKYGVVPIENNTEGAVGITLDCLGKYNEL------KIFGEIYMDIHHSFVGINENLKEIK 184
4 -4.470IDP02743 gene: bfmbAb; 3-methyl-2-oxobutanoate dehydrogenase, beta subunit [Bacillus anthracis str. `Ames Ancestor`] GBAA4383 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  18  204......DITVITYGL---CVHFALQAAEKLAQDGISAHILDLRTVYPLDKEAIIEAASKTGKVL.............................. 258
5 -4.430IDP05207 putative sulfonate ABC transporter,solute-binding lipoprotein [Clostridium difficile 630] CD2365 [Peptoclostridium difficile 630]  ali follow..  9  42......TITVGYYNCDHMTAGPVAESAGIYKDLGLNVKTVGNGKVPEGKMDAGYIGTKGLVGAIPKGSPITIAANNHTGGSEYLIVSKDIKEPK 133
6 -4.360IDP00790 gene: pdhB; pyruvate dehydrogenase complex E1 component, beta subunit SACOL1103 [Staphylococcus aureus subsp. aureus COL]  ali follow..  18  204......DISIITYGA---MVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAV.............................. 258
7 -4.310IDP02496 gene: pdhB; pyruvate dehydrogenase complex E1 component, beta subunit [Bacillus anthracis str. `Ames Ancestor`] GBAA4183 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  20  204......DVSVIAYGA---MVHAALKAAEELEKEGISLEVVDLRTVQPLDIETIIASVEKTGRVV.............................. 258
8 -4.310IDP02275 Type IV pili glycosylation protein [Francisella tularensis subsp. tularensis SCHU S4] FTT1158c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  16  95........FSIP--ERHSIPIFLSALNEAISSSGITII--DFKAKLSGNFSQLIKLFVAL-----IDMKDIAVITNINIKKESDD......... 180
9 -4.250IDP01255 gene: yugI; general stress protein 13 BA_5132 [Bacillus anthracis str. Ames]  ali follow..  16  1............MSEQYTTGVVVTGKVTGIQDYGAFVALDAETQGLVHISEITNGYVKDIHDFLKVGDTVEVKVLSIDEEHRKMSLSLK..... 77
10 -4.200IDP02425 gene: acoB; TPP-dependent acetoin dehydrogenase E1 beta-subunit [Bacillus anthracis str. `Ames Ancestor`] GBAA2775 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  16  216......DVTIVAIGK---QVHTALAAAEQLAKKGLEVEVIDPRSLSPLDEDTILSSVEKTNRLI.............................. 270
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 2 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.