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Query: [M] COG1004 Predicted UDP-glucose 6-dehydrogenase, from COG1018

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKVTVFGIGYVGLVQATVLAEVGHDVLCIDIDANKVADLKKGRIAIFEPGLAPLVKENYEAGRLQFSTDAQAGVAHGVIQFIAVGTPPDEDGAADLKYVLDVASTIGTYMDSPKVIIDKSTVPVGTADKVHQVIQAILEQRGEKIDFSVVSNPEFLKEGAAVADCKRPERIVIGIDTDDSGALELISELYEPFNRNHDRMLVMDIRSAELTKYAANGMLATKISFMNEIANIAERLGADIEKVRQGIGSDSRIGYHFIYSGCGYGGSCFPKDIQALIRTAEDKGYKPQLLQAVEQINNQQKYKLTEFIKSHFNSQLAGKTFAVWGLAFKPNTDDMREAPSRVVMESLWEAGATIQAYDPEAMDETQRIYGARDDLRLMGTKESALQGADALIICTEWQSFRAPDFDMIKSRLKHPVIFDGRNLYDPERLNSRGFTYYGIGRGVSINLSLast
1 -116.000IDP04467 putative nucleotide sugar dehydrogenase [Yersinia pestis CO92] YPO2174 [Yersinia pestis CO92]  ali follow..  100  1MKVTVFGIGYVGLVQATVLAEVGHDVLCIDIDANKVADLKKGRIAIFEPGLAPLVKENYEAGRLQFSTDAQAGVAHGVIQFIAVGTPPDEDGAADLKYVLDVASTIGTYMDSPKVIIDKSTVPVGTADKVHQVIQAILEQRGEKIDFSVVSNPEFLKEGAAVADCKRPERIVIGIDTDDSGALELISELYEPFNRNHDRMLVMDIRSAELTKYAANGMLATKISFMNEIANIAERLGADIEKVRQGIGSDSRIGYHFIYSGCGYGGSCFPKDIQALIRTAEDKGYKPQLLQAVEQINNQQKYKLTEFIKSHFNSQLAGKTFAVWGLAFKPNTDDMREAPSRVVMESLWEAGATIQAYDPEAMDETQRIYGARDDLRLMGTKESALQGADALIICTEWQSFRAPDFDMIKSRLKHPVIFDGRNLYDPERLNSRGFTYYGIGRGVSINLS 448
2 -92.900IDP01235 gene: wecC; UDP-N-acetyl-D-mannosamine dehydrogenase BA_5512 [Bacillus anthracis str. Ames]  ali follow..  24  1MKICTMGLGYIGLPTSAMFAKYGTEVVGVDIHQKVVDKLNNGEIHIEEPGLGEVVKEVVANGKFRASLT----PEEADAFIISVPTPNHDDKSCDLSYVLTATEKVLPFVKKGNVIIVESTIAPRSMDDYVKPLVEE-AGFTVGEDIYLVHCPERVLPGQILHELVHNNRIVGGVTPA---CAEAGARVYGVFVEG--EIIKTNAKTAEMSKLMENTFRDVNIALANELTKVCNSLDINVLDVIEMANKHPRVN--LHYPGPGVGGHCLAVDPYFIVAKAPELA---NIIKLSRETNVSMPHYVTEKVKELL-AGVENPKVAAFGVTYKGNVDDMRESPAMDVIDLIRNEGITVSAHDPHVESDFFE----------LHSAEEAVKDAHLILVLTDHDEFKTMNYDSLAPYMAKTVVFDTRNCVQAVSTGEMGTLYEALNKNVMM... 426
3 -90.900IDP00702 gene: cap5O; capsular polysaccharide biosynthesis protein Cap5O SACOL0150 [Staphylococcus aureus subsp. aureus COL]  ali follow..  26  1MKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQSGQISIEEPGLQEVYEEVLSSGKLKVSTT----PDASDVFIIAVPTPNNDDQSCDISLVMRALDSILSFLEKGNTIIVESTIAPKTMDDFVKPVIEN-LGFTIGEDIYLVHCPERVLPGKILEELVHNNRIIGGVTEA---CIEAGKRVYRTFVQG--EMIETDARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPRVN--IHQPGPGVGGHCLAVDPYFIIAKDPE---NAKLIQTGREINNSMPAYVVDTTKQII-KVLSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEDIEVCAYDPHVELD-----------FVEHDMSHAVKDASLVLILSDHSEFKNLSDSHFDK-MKHKVIFDTKNVVKSSFEDVSYYNYGNIFNF...... 417
4 -89.900IDP01494 UDP-glucose 6-dehydrogenase VCA0780 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  25  1MKIAIAGTGYVGLSNGILLAQ-HNEVVALDIVVSRVEQLNDKISPIADPEIESFLQHQP--LNFRATCDKRDAYQDAQFVVIATPTDYDPQTHFDTRTVEAVIDDVLA-INPQAIMVIKSTVPVGYTKRIKQRLCC----------NNLIFSPEFLREGRALYDNLYPSRIIVGEKSE--RGQAFATLLAQGAKKMDIPILLTHSTEAEAVKLFSNTYLAMRVSFFNELDTYAETHGLDTKQIIEGVGLDPRIGNHYNNPSFGYGGYCLPKDTRQLLRNFEDVP--NNLIRAIVDANTTRKDHIAFSILN-----RNPKVVGIYRLIMKSGSDNFRASSILGIMKRIKAQGVEVVIYEPVLNESTFY------GSPVIRDLAQFKAMAEVIVTNRRVAELEDVAE-----------KIYTRDLFGQD..................... 388
5 -87.500IDP01969 gene: kfiD; putative UDP-glucose 6-dehydrogenase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1441c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  24  1MKIVIVGIGYVGLANAILFSKNNNEVVLLDIDENKIQSINNHKSPIKDKLIEKFFVQNI--SKLHATSNIKEAYFNADFAVIATPTDYDEQLNFDTRSIENVLKDIKN-INSKINVIIKSTVPIGYTKTIKQKF----------NMSNIVFSPEFLREGSALYDSLYPSRIIIGDKSV--LGKTIGDLFLKNIEKKNVDIFYMDSDEAESVKLFSNTYLAMRVGFFNEVDSYARKHNLNSADIIKGISADDRIGKYYNNPSFGYGGYCLPKDTKQLL--ANFYNIPNSLIKAIVETNEIRKKFITQLILE-----KKPNILGIYRLIMKQNSDNFRNSVIIDIIKYLQEYNSNIEIYEPLVKEKKFL------NIKVENDFNVFGAKVDLIIANRFDDKLKEIK-----DKVFSADVFY-TDI......................... 393
6 -87.300IDP00425 gene: wecC; UDP-N-acetyl-D-mannosamine dehydrogenase YPO3863 [Yersinia pestis CO92]  ali follow..  24  4ETISVIGLGYIGLPTAAAFASRKKKVIGVDVNAHAVETINRGAIHIVEPDLDKVVKIAVEGGYLQAVTK----PQAADAFLIAVPTPFKGDHEPDMIFVESAAKSIAPVLKKGDLVILESTSPVGATEQMAQWLAEARPDLSEAADINIAYCPERVLPGQVMVELIQNDRVIGGMTPK---CSARASALYKIFLEG--ECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICDEQGINVWELIRLANRHPRVN--ILQPGPGVGGHCIAVDPWFIVSQNPQLA---RLIHTARLVNDGKPLWVVDRVKAAVDKRASEVKIACFGLAFKPDIDDLRESPAVGVARLIAEWHGETLVVEPNVEQLPKSLMG----LVTLKDTATALQQADVLVMLVDHKQFKAIKPEDI----KQQWIVDTKGVWR....................... 420
7 -87.000IDP01406 gene: wecC; UDP-N-acetyl-D-mannosamine dehydrogenase VC0918 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  26  4.KVSVIGLGYIGLPTAAVLASRGLDVVGVDVNAHAVDTINKGEIHIVEPDLDIVVRSAVMTGKLKATLT----AEPADAFLVAVPTPFKGDNEPDLSYIEAAAKTIAPVLAKGNLVVLESTSPVGTTEKLAQWLAEARPDLGIAADVKIAYCPERVLPGYVLQELVSNDRVIGGVSKA---CSEKAVALYKTFVKG--ECIVTNARTAEMAKLTENSFRDVNIAFANELSLVCNKLKINVWELIRLANRHPRVS--ILNPGPGVGGHCIAVDPWFIVNSCPD---EAQLIRTAREVNDGKPHWVVDQVKQAAD-QFKKPIIACLGLAFKADIDDLRESPALDITKHLAESKGQLLAVEPNITELPSKLA---KQGIELVSLERALELANIVVVLVDHKEFKAADKTE----FAKKVVIDTRGVVA....................... 413
8 -79.900IDP95261 WecC protein [Acinetobacter baumannii ATCC 17978] YP_001083149 [Acinetobacter baumannii ATCC 17978]  ali follow..  22  1.......................................................................................MDQVNRPDLTPLKKASETVGQALKKGDIVVYESTVYPGATEEVCIPILEKVSGLKFNQDFFAGYSPERINPGDKVNTLTKIKKITSGSTPE---VANTVDAVYASIITAG-THKASSIKVAEAAKVIENTQRDLNIALVNELSVIFDRIGIDTLDVLEAAGSKWNFLP---FRPGLVGGHCIGVDPYYLTHKAEEVGYHPQVILAGRRINDNMARYVARNTIKLMGIDVPRSKVGVLGVTFKENCPDIRNSKVADLIKELEFWGAQVVVADPWADAEEVK-----HEYGVELGTVNAQNPVDSLIVAVGHSEFRSLSASELRSYVKKPVLADVKSLFDRTQMSDVGFTVFRL......... 345
9 -18.600IDP06064 3-hydroxyacid dehydrogenase [Helicobacter pylori J99] NP_223303 [Helicobacter pylori J99]  ali follow..  19  1MKIGWIGLGAMGTPMATRLRDAGLEVSVYNRTESKAAPL--------------------KEKGVAVYTSPIDLAAKVDLVFTMLSDK---------AAIDAVLAPKFWEQMSKKIVVNMSTIAPLESLSLEKIAQKHQATY---LEAPVSGSVGAAKAGALL--------LAAGDEEVISKLKPVLAHL------GSQTFYLGKVGQGTGAKLSINSLLAQMGVAYSEALLLAKRLGVDAESFLQIIGQSGMNSPLFQAKKAAFSLKLMAKDIRLAKNEAGE-AMKLPFLFQAEEL........................................................................................................................................................ 259
10 -13.200IDP02226 gene: yqjI; 6-phosphogluconate dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA0164 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  13  4LQIGVVGVGVMGKSLALNFESKGYSVALYDISKEKVDET----------------IEENRGKNLVGTHIVEEFVNSLESPRKILLMV------NAGEITDKAIDSLVPHLDKGDILIDGGNTYFVDTIRRNKRLAEEGINF---IGAGVSGGEEGALKGPSI--------MPGGQKDAYEKVKDMLENISAKVNNEPCCSYIGPNGAGHYVKMVHNGIEYGDMQLICEAYFFLKQTLDL------------------------------AEEFHEIFAEWNKGELNSYLIEITADIDEETGKPLVDVILDTAGQKGTGKWTSQSALDLGISLPIITESVFARCISALKEERVNAS-DKTAIGVEKAELIEAVRQALYMSKICSYAQGFTQLKAASEEYNW-NLDFGSISMLWRGGCIIRAA........................... 371
11 -13.100IDP06299 6-phosphogluconate dehydrogenase [Streptococcus pneumoniae TIGR4] NP_344902 [Streptococcus pneumoniae TIGR4]  ali follow..  10  4ANFGVVGMAVMGRNLALNIESRGYTVAIYNRSKEKTEDV----------------IACHPEKNFVPSYDVESFVNSIEKPRRIMLMV------QAGPGTDATIQALLPHLDKGDILIDGGNTFYKDTIRRNEELANSGINF---IGTGVSGGEKGALEGPSI--------MPGGQKEAYELVADVLEEISAKAPEDGKPCVT-PDGAGHYVKMVHNGIEYGDMQLIAESYDLMQHLLGLSAEDMAEIFTE-EITADILSRDEGQDGPIVDYILDAAGNKGTGKWTSQSSLDLGVPLSLITESVFARYIKAELIEKIRQALYFSKIISYAQGFAQLRVASKFADIASIWRDGCIIRSRFLQKITDAYNRDADLANLLLDEYFLDVTAGVPVPTFSAAITYFDSYR----SADLPANLIQAQRDYFGAHTYQRKD............... 461
12 -13.000IDP02668 gene: gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA1526 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  3.KITVVGAGSWGTALAMVLADNGHDVRIWGNRSELMDEINTKHE-------SRYLPGITLPSTIVAYSSLEEALVDVNVVLIVVPT----------KAYREVLQDMKKYVAGPTTWIHASKGIEPGTSKRISEVIEEEIPEDLIKDVVVLSGPSHAEE--------QATTVTSA--AKRMEAAEEVQDLFMELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTGMGDLI-SRNWRAGNMLGGHSLEEVLESMGMVVEGVRTTKAAHELAEKMEVEMP--ITAALYDVLFNGNNVKDAVLMGRVRKHEVEAIPD............................................................................................................... 338
13 -12.300IDP01730 gene: gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [Francisella tularensis subsp. tularensis SCHU S4] FTT0871 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  15  4.NILVLGAGAWGTALALQLAYRGHNVRINSWKAEHNEQMLKNNNHKYLPSIEKF------PSRLKAIQDWQANIIEFDSILVATPS----------SGFKNTILELKECILPQQNIISATK---GFCHDSYALLSEIAEDILPTTKFALLTGPSFAKE--------LPTAVVVA--SKDINYARYVQELFSQVGGAVKNVLAITAGIAAGMEFGVNAHAALITRGLAEIKKLGLKLGANSETFIGLSCLGDLL-SRNRRFGLYLGGMTIQQALKEVNNVVEGYFTAKAVYNLAKKHNVEMP--LVFATYRILYEAADPRDIV.............................................................................................................................. 320
14 -11.800IDP01976 gene: gpsA; glycerol-3-phosphate dehydrogenase (NAD+) [Coxiella burnetii RSA 493] CBU_1518 [Coxiella burnetii RSA 493]  ali follow..  14  7.PIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGV-------NRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPS----------FAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQ----VPMAVISGPSLATE--------LPTAVSLA--SNNSQFSKDLIERLHELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFGGKQETLTGLAGLGDLV-SRNRRFGLALGEGVDKKEADQVHALAQKHAIEMPLTFQVHRI........................................................................................................................................................ 310
15 -11.400IDP04504 2-dehydropantoate 2-reductase [Vibrio cholerae O1 biovar eltor str. N16961] VC2307 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  12  1MNIVVLGPGAVGSLWALHLHSAGHQVALWSRQAQPTITLQLDEEAP-----------------ISFRNQNLDTLIHADLLLITVKA-----------QVEAALQPLLPHLNRETILLFMHN--MGAVEAISESLTHFPVLFATTTHGALKATLNQVSHTGF-------GQTQVGPFNALGARCDFIADVFNH--ALAPVTWNPEIQQALWRKLAVNCAINPLTAIHQEFTPIITAILDEVTAVMQAEAIS-------------------------------EAEALRDGVYQVIQATAANLSSMHQDVFHRRPTEIDFITGYVVRKGEQHGIATPVNSALYQQIKTLEQSWSK............................................................................................... 295
16 -10.900IDP90757 gene: ilvC; ketol-acid reductoisomerase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0632 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  11  19KKVAIIGFGSQGHAHAMNLRDNGVNVTIGLREGSVSAVKAK------NAGFE--------------VVSVSEASKIADVIMILAP---------DEIQADIFNVEIKPNLSEGKAIAFAHGFNIHYGQIVVP---KGVDVIMIAPKAPGHTVRNEFTLGGGT------PCLIAIHQDESKNAKNLALSYASAIGGGRTGIIETTFKAETETDLEQAVLCGGLSALIQAGFETLVEAGYEPEMAYFECLHEMKLIVDLI----------YQGGIADMRYSISNTAEYGDYITGPKIITEETKKAMKGVLKDIQNGVFAKDFIL----ERRAGFARMHAERKNMNDSLIEKTGRNLRAMMPWISAKK................................................................................... 333
17 -10.800IDP02330 gene: ilvC-1; ketol-acid reductoisomerase [Bacillus anthracis str. `Ames Ancestor`] GBAA1419 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  12  18KKVAIIGYGSQGHAHAQNLRDNGFDVVVGLRKGKSWDKAK-------EDGFS--------------VYTVAEAAKQADVVMILLP---------DELQPEVYEEEIAPNLQAGNSLVFAHGFNVHFDQVKPPVNVDVFLVAPKGPGHLVRRTFS---EGGAVPALFA---VYQDATGVATEKALSYADGIGATRAGVLETTFKEETETDL-FGEQAVLCGGVTALVKAGFETLVDAGYQPELAYFEC......................................................................................................................................................................................................... 227
18 -10.300IDP05101 gene: hbd; 3-hydroxybutyryl-CoA dehydrogenase [Clostridium difficile 630] CD1058 [Peptoclostridium difficile 630]  ali follow..  16  1MKLAVIGSGTMGSGIVQTFASCGHDVCLKSRTQGAIDKLDKNLTKLVTKGKMDEATKAEILSHVSSTTNYED-LKDMDLIIEAS--------VEDMNIKKDVFKLLDELCKEDTIL---------------------------------ATNTSSLSITEIASSTKRPDKVI-GMHFFNPVPMMKLVEVISGQLTSKVTFDTVFELSKSINKVPSPGFVVNRIPMINEAVGIYADGVASKEEIDEAMGANHPMGPLALGDLIGL........................................................................................................................................................................................ 234
19 -9.790IDP92023 glycerol-3-phosphate dehydrogenase, putative [Toxoplasma gondii ME49] TGME49_010260 [Toxoplasma gondii ME49]  ali follow..  11  17LKVSVVGSGNWGSVIAKIVALNAQKSYVFHNE-----RMWVYEEMVDGEKLTDIINKTHENENLVALPDVVEACRDSDLLIFIMPH----------QFATKVCEQLAEAVVPGHARAITLLKGLHVENGKPTLFSDIFKTKLDIVDCCVLSGANVAND--------EFAEATIGYSPEETDAALIWQQLFDT-----KVNALPDVAGVQVCGAVKN-VIAIAAGFCNAKTAIIRLGVEEMKQFAMIFFDNIMAETFFDSAGYA--------DVITTVFGGRNARCAAEFLRRGGKAT-------WDQIEADLGQKLQGTLTTKEVYEVIAAYEVERLFPLFSVTYEIAFNGRDPN............................................................................................. 355
20 -9.720IDP92082 glycerol-3-phosphate dehydrogenase, putative [Toxoplasma gondii ME49] TGME49_107570 [Toxoplasma gondii ME49]  ali follow..  10  23LRVAVIGSGNWGSVIGKICAQNAERSYVFHDQEEMIEGQKLTDIINQKHENVKYLPGHKLPDNLVAVPDVVEACRGADLLVFVMPH----------QFVAKVCDQLAKAVVPSHARAISLLKGLYVEGGRPQLFSDTIRSKLNIVECAALSGANVAND--------EFAEATIGHSPDETDTALIWQQLFDK-----KVNTLPDVAGVQLCGAVKN-VVALAAGFCNTKSAIIRLGVEEMKQFGMIFFDNVIAETFFDSAGYA--------DVITTVFGGRNARCAAEFV-----RQKGSKTWDQIEAEMLNGQKLQGTLTAREVFEVISSHEVDHLFPLFTVTYDIAFKGRDPA............................................................................................. 361
21 -9.610IDP06313 hypothetical protein SP_1627 [Streptococcus pneumoniae TIGR4] NP_346067 [Streptococcus pneumoniae TIGR4]  ali follow..  11  1MKLAVIANGQAGKAIVEEAVKRGHEVTAIVRSENKSQAESIIKKDLFEL--------------------TKDDLTGFDAVISAFGAYTPDTLPLHSKSIELFNQLLAGTQTRFLVVGGAGSLYIDETKTTRLLDTPDFPEEFKPLAKAQADELDLLRTKNNLNWTFVSPAVDFIPDGEKTGNYILAGEIFTTNEKGISQISYADYAIGLVDELEKGHHIKERISLLEK............................................................................................................................................................................................................................ 209

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 5   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Flexible structure alignment by chaining aligned fragment pairs allowing twists. Bioinformatics. 2003 Oct;19 Suppl 2:II246-II255.