current user: public
If you have questions about the server, please let us know.

Query: [C] COG1150 Heterodisulfide reductase, subunit C, from COG1018

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190
# Score Template Links and tools%idFirst MVEPRDTVIREEDLNPDFLEELSELVEPVFEEEEVLSVQACYQCGTCTGSCPSGRRTSYRTRLIMRKLQLGLVDEVIKSDELWMCTTCYTCYERCPRGVKIVDAVKAARNLAAKKGYMAKAHRMVAMFVIKTGHAVPINDEIREVRKNIGLDEVPPTTHRYEEALEEVQKLVKINEFDKLIGYDWEEGDLVDLast
1 -32.200IDP92111 iron-sulfur subunit of succinate dehydrogenase, putative [Toxoplasma gondii ME49] TGME49_015280 [Toxoplasma gondii ME49]  ali follow..  13  187FYAQYRSVEPWLKRKTPKKDPNVENLQSIEDRRKLDGMYECILCACCSTSCPSYWWNPLGPAVLMQAFRWERLAAINDTMKLYRCHGIMNCTVSCPKGLNPAGAIQKMKDQVEARFSPAWQAQQALEKSQKLAKDLGLAA.................................................... 342
2 -31.300IDP00546 gene: frdB; fumarate reductase iron-sulfur subunit YPO0359 [Yersinia pestis CO92]  ali follow..  18  122.............IGNERLPKDGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPIGPAAITLAHRYERMPQLNGKNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKIDSAKDFMIA......................................................................... 239
3 -28.500IDP00615 gene: sdhB; succinate dehydrogenase iron-sulfur subunit SACOL1160 [Staphylococcus aureus subsp. aureus COL]  ali follow..  14  145..............IDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNVTENNVGAQAISQVRLFERLNALMGTGGLQQCGNSQNCVNACPKGIPLTTSIAAMNRETTFHM............................................................................ 259
4 -28.500IDP01474 fumarate reductase iron-sulfur subunit VC2657 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  18  123..............GNDRKPEDGTNLQTPEQMARYKQFAGCINCGLCYAACPQFGLNEFLGPAALTLAHRYNLDSINGDNGAWGCTFVGYCSEVCPKHVDPAAAVNQGKVESSLDF............................................................................ 236
5 -25.100IDP04683 iron-sulfur cluster-binding protein [Bacillus anthracis str. `Ames Ancestor`] GBAA3269 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  21  306...................................EEVLKCIRCGACVNVCPVYRNGSVYSGPIGAVLAPLLEGYEELKELPFASSLCGACTDVCPVKIPLHDLLIEHRKDVVEQGFITKFEQLAFKGF............................................................... 405
6 -23.800IDP02194 gene: sdhB; succinate dehydrogenase iron-sulfur subunit [Francisella tularensis subsp. tularensis SCHU S4] FTT0075 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  21  117.............LINDDEPPVKERLQSPEDRAKLDGLYECILCACCTTSCPSFWWNPIGPSGLLQAYRFQRLEDLKDPFSLFRCRTIMNCVSVCPKGLNPTEAIGKIRSALLKKN............................................................................ 232
7 -23.600IDP02592 glycolate oxidase, iron-sulfur subunit, putative [Bacillus anthracis str. `Ames Ancestor`] GBAA1308 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  20  20...................................DELLNCMRCGFCLPTCPTYIQSGYSPRGRIALMKAVVDGLIEPDEDV-VCLGCRACEPVCPSGVNYGHLLEEARDIINQNKKFSMPVRAVRKVVFEE............................................................ 124
8 -23.300IDP01445 gene: sdhB; succinate dehydrogenase iron-sulfur subunit VC2088 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  17  137..............................ERAHLDGLYECIMCACCTTSCPSFWWNPIGPAGLLAAYRWERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLINRS............................................................................ 235
9 -18.700IDP00452 electron transport complex protein RnfB YPO2245 [Yersinia pestis CO92]  ali follow..  23  115......................................ANCIGCTKCIQACPVDA--------------IIGATRAMHTVLSDLCTGCDLCVAPCPTDC............................................................................................. 161
10 -18.700IDP06075 gene: nuoI; NADH dehydrogenase subunit I [Helicobacter pylori J99] NP_223907 [Helicobacter pylori J99]  ali follow..  21  71.............................LQRLLDSGSERCIGCGLCEKICTSNCIR-------IITHKGEDNRKKIDSYTI-RCIYCGLCAEVCPELA............................................................................................. 135
11 -18.200IDP00512 electron transport complex protein RnfC YPO2244 [Yersinia pestis CO92]  ali follow..  17  375......................................QSCIRCGLCVDACPAG----LLPQQLYWFSRGEEHEKARNHN-LFDCIECGACAYVCPSNIPLVQYYRQEKAEIRALDQESARAAEAKARFEAKQARLAREKLARELRHK............................................ 479
12 -18.200IDP02246 gene: rnfB; Iron-sulfur cluster-binding protein [Francisella tularensis subsp. tularensis SCHU S4] FTT0649c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  14  81......................................SMCIGCEKCLLACPVDA--------------IVGAKKLMHTIIEAECTGCELCVEPCPMDISLVDLAADKQPNNLTNHAYTTQKNHYRDRYEYHKQRVSQTKAKQRDVYKNIATAQEIDKKAYIAAS........................... 194
13 -17.400IDP91352 electron transport complex protein RnfC [Vibrio vulnificus CMCP6] VV1_3095 [Vibrio vulnificus CMCP6]  ali follow..  18  376......................................MECIRCGACAEACPA----SLLPQQLQWHAKAEEFDKC-EELNLKDCIECGACAFVCPSEIPLVSYYRQAKAEIRTRAQEADAAERAKLRFEEKKARMEREKEERENRFKKAAEDRRKEMKSTGGD............................ 496
14 -17.300IDP04528 gene: napH; quinol dehydrogenase membrane component [Salmonella typhimurium LT2] STM2257_1_289 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  17  222....................................KREKCNRCMDCFHVCPEPHV-------LRAPVLDEQSPAQVTHRD---CMTCGRCVDVCSEDVFTITIRNIIRDASRR.............................................................................. 289
15 -17.000IDP02723 gene: nuoI; NADH dehydrogenase subunit I [Francisella tularensis subsp. tularensis SCHU S4] FTT0039 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  24  59....................................GEERCIACKLCEVVCPALAIT-------INSTEREDGTRRTSSYEM-KCIFCGYCEESCPVDS............................................................................................. 116
16 -16.500IDP90516 gene: oorD; 2-oxoglutarate-acceptor oxidoreductase subunit OorD [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0535 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  26  13...................................VDEHRCKACNICVSYCPAGVLAMRDDVH----AVLGQMIEVVHPES---CIGCTECEIHCPDFA............................................................................................. 69
17 -15.500IDP00453 putative iron-sulphur protein YPO2969 [Yersinia pestis CO92]  ali follow..  22  65.....................................QQSCTGCGVCVAACEENLIVMVNQRPALNFSTPYFSTP--------YCSRCQACSTACQTGA............................................................................................. 118
18 -14.900IDP00543 gene: fdoH; formate dehydrogenase-O, iron-sulfur subunit YPO4057 [Yersinia pestis CO92]  ali follow..  15  101.......................................GCMHCADCLKACPSEGAIIQYANGIVDFQSE-------------HCIGCGYCIAGCPFDVPRMNKDDNRVYKCVGVGQEPACVKTCPTGAIHFGTKESMKEVAAGRVAEL........................................... 205
19 -14.800IDP01812 ferredoxin [Francisella tularensis subsp. tularensis SCHU S4] FTT1764c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  25  7......................................ESCIKCGDCVEVCPVDCFYEGPNMLVINP----------------ECIDCALCEPECPVNA............................................................................................. 54
20 -14.700IDP02074 gene: hybA; hydrogenase 2 protein HybA [Salmonella typhimurium LT2] STM3149 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  15  111.......................................QCMHCVDCVSVCPVSALKKDPKTGIVHYDKD-------------VCTGCRYCMVACPYNVPKYDYNNPFGALRLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKRLALKPGSEYHYPRQTLKTDDTYLHTV..................... 243
21 -14.700IDP01308 iron-sulfur cluster-binding protein VC1516 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  27  415...................................CQTSDCTLCMSCVAVCPTRA------------LHLAGDSPALRFIE--DCVQCGLCVKACPEQV............................................................................................. 465
22 -14.400IDP06055 ferredoxin [Helicobacter pylori J99] NP_222983 [Helicobacter pylori J99]  ali follow..  22  7......................................DECIACDACREECPSEAIEEGDPIYSIDPDR---------------CTECPRCVSVCPVDA............................................................................................. 59
23 -14.400IDP01006 putative anaerobic dimethylsulfoxide reductase STM2529 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  20  77.......................................SCNHCADCTKNCPTTAMHKRPGDGIVRVDTD-------------KCVGCGYCAWSCPYGAPQLNEQTGQMSKCLAKGEPPVCVATCPLEAIKFGPIDELRAKYGSVCDVNGLPD....................................... 185
24 -14.300IDP93838 nrfc protein [Yersinia enterocolitica subsp. palearctica Y11] YP_006003981 [Yersinia enterocolitica subsp. palearctica Y11]  ali follow..  15  91.......................................SCQHCDKCVDVCPTGASYRDKATGIVDVNPD-------------LCVGCQYCIAACPYRVRTADKCDFCRKTNLKQGKQPACVLSCPTKALTFGNLDSPDCELVKLLHQRTVYRAKLHLGTQPK............................. 210
25 -14.300IDP00878 putative anaerobic dimethylsulfoxide reductase subunit B STM4306 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  15  65.......................................ACNHCDECVSGCPTGAMHKRKEDGLVVVDDS-------------VCVGCRYCEMRCPYGAPQFDTQANVMRKCLENNLRPICVDSCPQRALDFGPVDELRAKYGTENQIAPLPS....................................... 173
26 -14.000IDP01082 gene: nrfC; putative formate-dependent nitrite reductase STM4279 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  16  91.......................................SCQHCDHCVDVCPTGASFRDAASGIVDVNPD-------------LCVGCQYCIAACPYRVRTADKCDFCRKTNLKAGKQPACVESCPTKALTFGNLDDPNSDISRLLRQKTTYRYKLALGTKPK............................. 210
27 -14.000IDP91439 ferredoxin [Vibrio vulnificus CMCP6] VV1_0471 [Vibrio vulnificus CMCP6]  ali follow..  25  7......................................DKCINCDMCDPECPNGAISMGDKIFEID-----------------LCTECKTCQSVCPITK............................................................................................. 58
28 -14.000IDP01518 formate dehydrogenase, iron-sulfur subunit VC1512 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  17  8...................................CDTKRCIECNGCVTACKNENDDALEWGIQRRRVVTLNDGEPGENSISVACMHCTDCMAVCPADC............................................................................................. 73
29 -13.700IDP00961 gene: ttrB; tetrathionate reductase complex subunit B STM1385 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  13  105.......................................LCNHCDNCVPVCPVQATFQ--------------REDGIVVVDNKRCVGCAYCVQACPYDARFINHETQTADKCLEAGLLPACVESCVGGARIIGDIKDPHSRIATMLHQ............................................ 207
30 -13.600IDP00470 putative iron-sulfur cluster-binding protein YPO0367 [Yersinia pestis CO92]  ali follow..  20  206.....................LGELLIDLPLPVDKPQEEQCGRCVACMTTCPTGAIVAVDARRCISYLTIELEGAIPEENRIY---GCDDCQLICPWN.............................................................................................. 288
31 -13.500IDP01930 gene: narY; nitrate reductase 2 beta subunit [Salmonella typhimurium LT2] STM1578 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  17  182.......................................LCEHC-SCVATCPSGAIYKREEDGIV----------LIDQDK---CRGWRLCISGCPYKKIYFNWKSGKSEKCIESGQPTVCSETCVGRIRYLGVLLYDADRIEEAASTEHETDL...................................... 291
32 -13.500IDP00930 putative hydrogenase protein STM0612 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  15  1.............................MRRAFLVNSDKCIGCRGCAMACKSFNQLEPDRFWRVYPLDKDIYPHEERAFYSLACNHCEHCVAACPVEA............................................................................................. 73
33 -13.400IDP91392 hypothetical protein VV1_1289 [Vibrio vulnificus CMCP6] VV1_1289 [Vibrio vulnificus CMCP6]  ali follow..  22  170.....................LGELLIDLPLPVDQASEEACGKCQACITSCPTQAIVDVDARRCISYLTIEHDGIIAPENRIY---GCDDCQLVCPWN.............................................................................................. 252
34 -13.100IDP00983 gene: phsB; thiosulfate reductase electron transport protein STM2064 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  17  63.......................................SCQHCENCVSVCPTGASYRDENGIVQVDKS--------------RCIGCDYCVAACPFHVGVADKCNFCADTRLAAGQSPACVSVCPTDALKFGR.......................................................... 152
35 -12.300IDP00481 gene: gltD; glutamate synthase subunit beta YPO3558 [Yersinia pestis CO92]  ali follow..  15  22...............KIRKIEFVEIYEPFSETQAKAQADRCLSCGNCEWKCPVHNYIPNWLKLANEGRIMEAADLAHQTNSL-VCPQDRLCEGSCTLNDEFGAVIGNIERYISDKGAGPAGL-ACADVLARNGVQAVVFDRHPEIGLTFGIPAFKLEKEVMIKRRKIFSEMGIEFQLNTEVGKDITMEALLK 230
36 -10.400IDP00444 putative oxidoreductase Fe-S binding subunit YPO0342 [Yersinia pestis CO92]  ali follow..  14  219...............AERKTGFAEIYLPFTESQIHEQAERCLECGDCQWTCPLHNAIPKWISLAHQGRIHEAAELSHQTSSL-VCPQDRLCEQSCTLNDHDGAVIGQIERHITETGAGPAGL-GCADILVRNGITPVVFDRYPEIGLTFGIPAFKLEKSVMTRRREIFTEMGVEFCLNTEIGRDITMENLLH 428
37 -10.400IDP02316 gene: nuoG; NADH dehydrogenase subunit G [Francisella tularensis subsp. tularensis SCHU S4] FTT0037 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  14  118....QDIAMGYGNTTSEYLESKRTVEDPELGPLVATDMTRCILCTRCVRFG-----EEIAGVKELGVMGRGDHSAISTSGEMVDSEISANIIDLCPVGA............................................................................................. 209
38 -9.720IDP01003 gene: aegA; putative oxidoreductase Fe-S binding subunit STM2479 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  14  203................ARKTTFEEIYLPFRAAQAEREASRCLTCGECEWTCPLHNHIPQWIELVKAGDIDAAVELSHQTNCL-VCPQDRLCEGACTLRDEYGAVIGNIERYISDRGAGPAGL-ACADVLARHGVSATVYDRHPEIGLTFGIPAFKLDKSLLARRREIFSAMGIRFELNCEVGKDISLETLLE 411
39 -9.060IDP06171 gene: nuoG; NADH dehydrogenase subunit G [Helicobacter pylori J99] NP_223905 [Helicobacter pylori J99]  ali follow..  15  77LMDERKSIMQTHPLECGVCDKSGECELQDMTHLTGYDPNLCIMCERCVTTC-----KDNVGENNLKATKADLHAPDKFKDS--PCYDCGECIAVCPVGA............................................................................................. 217
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 3 9   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Godzik A. Fold recognition methods. Methods Biochem Anal. 2003;44:525-46. Review.