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Query: [S] COG1814 Uncharacterized membrane protein, from COG1018

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst METTSNSKLVEVARKAALDEYKEYVTYSVLARVERNKARRAVLERLAEQEREHFQFWNKFAGVKPPAWRFRLYAYFMAFLRLILGVTFVAKLMERGEEAIARYKSAEPLLSGPDREALRRIIKDEEEHERALIAQLDEAIVKYMGALVLGLADAIIEITGAHAGTLGTTNNTVAAGVIGLIVGVGAAISMASASYLQTKHEVGKSPSVAALVTGVGYIAAVALMSLPYFLIHDVYLAFAASIAVGVMLTFLLTFQSAVYADRDFKFEFLQTVGLLLGTAFLTYLLGEWLGSLFGIRNILLast
1 -16.000IDP04040 gene: cotJC; spore coat protein CotJC [Clostridium perfringens ATCC 13124] CPF_1068 [Clostridium perfringens ATCC 13124]  ali follow..  21  119..IQAKGDVVADLHEDMAAEQKARATYQWLINLTDDQDIKEILRFLREREIVHFQRFGEALMD............................................................................................................................................................................................................................................ 179
2 -7.830IDP91349 SoxR-reducing system protein RsxE [Vibrio vulnificus CMCP6] VV1_3098 [Vibrio vulnificus CMCP6]  ali follow..  12  2.........................................................................................................................................SEHKKLLKNGMWDNNPALVQLLG-LCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLIRN-----PKEIRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRAEAYASKNDPLPAALDGFWMGMGMTTVLVVLG-AMREIIGNGTLF 158
3 -7.810IDP01358 ferritin VC0078 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  10  4EFFMLSQAMVEHLNEQINLEFFSSNLYLQMSEDKGFDGAAEFLRAHAVEEMQHMQRLFTYVSET--------------------GALPILGAIAAPRHDFASLGEVFRETYQHEQKITQQINK-----AHVAFTSQDYSTFNFLQWYVAEQHEEEKLFKGILDKLELVGEDGKALFF.......................................................................................................................... 159
4 -7.620IDP02347 gene: ftnA; ferritin [Yersinia pestis CO92] YPO1783 [Yersinia pestis CO92]  ali follow..  10  3.....KKEMAQKLNEQLNLEFYSANLYLQMSAWCSDEGAAAFLKKHSQEEMQHMERLFEYLSGT........................................................................................................................................................................................................................................... 64
5 -7.570IDP01129 ferritin BA_5296 [Bacillus anthracis str. Ames]  ali follow..  18  3.....SKKLHDALNDQMNFEFYSAHAYMAMATAESYDGFANFFLVQAEEERFHAMKLYNYINDR........................................................................................................................................................................................................................................... 64
6 -7.560IDP00977 gene: ftnB; ferritin-like protein STM1932 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  11  3.....AVGMVQKLNTPMNLEFYASNLYLHLSSEHSLTGTATFLRTQAQGNVTQMMRMFNFMKNA........................................................................................................................................................................................................................................... 64
7 -7.530IDP00611 ferritins family protein SACOL1952 [Staphylococcus aureus subsp. aureus COL]  ali follow..  20  3.....SKNLLEALNDQMNHEYFAAHAYMAMADKESYEGFANFFIQQAKEERFHGQKIYNYINDR........................................................................................................................................................................................................................................... 64
8 -7.480IDP91444 hypothetical protein VV1_0416 [Vibrio vulnificus CMCP6] VV1_0416 [Vibrio vulnificus CMCP6]  ali follow..  10  2...........................................................................................................................................STKLANPAPLGLMGFGMTTILLNIHNAGFFPIDSMILYGGLSQVIVGIMCFKRGDTFGT----------TAFTSYGLFWLTLVALIVMPYMGLPASPANFMGWYLALWGIFTGFMFIGSLCYPTAKQVVFGSLTILFALLAARDFTGS-IGTIAGFEGIF 157
9 -7.080IDP91420 hypothetical protein VV1_0667 [Vibrio vulnificus CMCP6] VV1_0667 [Vibrio vulnificus CMCP6]  ali follow..  9  36.........................................................................................................................................................ALGGAIGHGSRYLMMKFGIPIEWATFFAATLVGMIGVYWSRRLLAHP--------------KVFTVAALIPMVPGVFTFKAMIAMVEINHLGYTPELVAVCMENFLK---------------AMFIIAGLAVGLAVPGLL...... 146
10 -5.490IDP06445 gene: H3L; H3L [Monkeypox virus Zaire-96-I-16] NP_536520 [Monkeypox virus Zaire-96-I-16]  ali follow..  12  39DNEVMQEKRDVVIVNDDPDHYKDYVFIQWTGGNIRDDDKYTHFTMCTEETKRHLALWDSKFFIELENKNVEYVVII-NVIEDITFLRPVLKAIHDKKIDILQMREIITGNKVKTELVIDK----------------DHAIFTYTGGYDVSLSAYIIRVTTALNIVDEIIKSGGLENEMKINRQIMDNSAKYVEHDPRLVAEHRFETMKPNFWSRIGTVAAKRYPGVMYTFTTPL--SFFGLFDINVIGLIVILFI-------------MFMLIFNVKSKLLWFLTGTFVTAFI...... 324
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.