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Query: [O] COG5596 Mitochondrial import inner membrane translocase, subunit TIM22, from COG1018

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSLSGLLPPNLGGNSPNADGNLTPEEKAALQQAKIIGYMNRISESCVFKSSMAGVLGFGLGGIFGMFISSLDLQHIDPKIYEKPFREQIRIQARDMGSRSFSTAKNFGLLGLIYSGSECCIEAFRAKTDIYNAIAAGVFTGGALAVRSGPKAIVLGGAGFGLFSYGIEKYMHWGELast
1 -9.000IDP93853 secretion system effector protein SseC [Yersinia enterocolitica subsp. palearctica Y11] YP_006007025 [Yersinia enterocolitica subsp. palearctica Y11]  ali follow..  16  95.................................................SMVSSLNLGLFSNLCKSISQQMERATDVQTFLRDKRVAEYQQQIDKAVEQADK-AKKAGIFTAVFDWIVGAVEVVYG------KVAEGVLTGDPLAIASGVAYLAAGTAGLVKAAA.......... 205
2 -8.010IDP00194 putative membrane protein YPO0983 [Yersinia pestis CO92]  ali follow..  4  134........................................................................................FRGFLLNAGIGFGRRGRLLAVVSLLFALVHT---QYLYPATFVSLFVFSAILCEVRIRTGSLLMPMVLHSANNIASVAWVLTLS... 216
3 -7.530IDP91318 biopolymer transport protein [Vibrio vulnificus CMCP6] VV2_0362 [Vibrio vulnificus CMCP6]  ali follow..  14  111..........................................................................................................LGLLGTVTGMIS-VFDVMATQGSSNPKLMASGISLATLPTMAGMVAALVGMFVHARLVKLCQNREVKLE 178
4 -6.460IDP06119 hypothetical protein jhp1487 [Helicobacter pylori J99] NP_224205 [Helicobacter pylori J99]  ali follow..  8  106.......................................................................................HAGGAFSAAGFVYYRYGWKPALPVIALAILTDTSRVVAGQHTILQ-VTIGSLIAWGFA.............................. 162
5 -6.370IDP00174 putative membrane protein YPO1140 [Yersinia pestis CO92]  ali follow..  14  189........................................................................................FRGYLQQRLGQWLGSYPALVITALLFG----SAHFAGGPLLMLFAALAGVIYGLAWLWSGRLWVAVAFHFALNLMHLLFFTY..... 266
6 -5.880IDP92715 gene: proWX; choline transporter (glycine betaine transport system permease) [Streptococcus pneumoniae D39] YP_817092 [Streptococcus pneumoniae D39]  ali follow..  13  26.................................................SLLTLLLAILLAIPLAVYLRYHEKLADWVLQIAGIFQTIPSLALLGLFIPLMGIGTLPALTALIYAIFPILQNTITGLKGIDPSLQAGIAFGAMPVIMSGIRTAAVLIIGTATLATLI........ 159
7 -5.620IDP92691 hypothetical protein SAUSA300_0346 [Staphylococcus aureus subsp. aureus USA300_FPR3757] YP_493060 [Staphylococcus aureus subsp. aureus USA300_FPR3757]  ali follow..  8  334...........................TMTRNVKDKKGTASVIGGAIAGLVLSIILAITFVETLGNSGILRESMEAGLGMHKRSNAKRWNDMIKNMYANAISNGNLVLLATIGLISV------LREGVEVIKDFIIGIALAIVILIIFAVLSIFIFIMGFKMLGVSIQKLQL... 514
8 -5.500IDP02006 gene: glpB; anaerobic glycerol-3-phosphate dehydrogenase subunit B [Salmonella typhimurium LT2] STM2285 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  22  2..............................................................................................................................KFDTV--IMGGGLAGGLQLQQHGLRCAIVTRGQSAL............. 38
9 -5.490IDP95369 set238a-013 [Vibrio cholerae]  ali follow..  8  764..................................................TIVVAGAISAGRAWVTIAEQGLLDRTLKNALNTTKVLGTKDALKTFAKSIALVA-TVGMIASALETWESWGKFNDSSKTDLERFGYLLKAGATGAQGIIFYIQFFTLLGSGIGGPSI........ 879
10 -5.350IDP91351 gene: rnfD; electron transport complex protein RnfD [Vibrio vulnificus CMCP6] VV1_3096 [Vibrio vulnificus CMCP6]  ali follow..  12  286............................................................................................................MLGAFFIATDPVSASTTIKGRILFGAIIGTLVFIIRSWGGFPDGVAFAVLLANMCVPLIDYYTKPR. 351
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 5 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.