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Query: [GOU] KOG1442 GDP-fucose transporter, from COG1018

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MYKNLEEHNRLVNKYLKIFFVVSLYWCTSILTVFVNKHLLSSDTVNLGAPLFMSWFQCVVSTVICFVASRLSRKYPSVFTFPEGNPLDIDTFRKILPLSVLYTLMIGANNLSLSYVTVAFYYIGRSLTTVFSVVLTYVILRQRTSFKCLLCCGAIVVGFWLGVDQESLTEVFSWRGTIFGVLSSLALAMFSIQTKKSLGYVNQEVWLLSYYNNLYSTLLFLPLIIINGELESIITYPHLWASWFWAAMTLSGLCGFAIGFVTALEIKVTSALTHNISGTAKACAQTVIATQYYHDVRSALWWTSNVVVLVASAAYTRVKQLEMMRQHQQRSTATQKALast
1 -25.300IDP06148 hypothetical protein jhp1155 [Helicobacter pylori J99] NP_223873 [Helicobacter pylori J99]  ali follow..  12  2.......RNTILFGVSMILLANLCFGIMSAFVKITADYF----------PMENVFYRSITMTLLLLLIYPFKP--------YRLKSYKQGGFKKLAFRVVVGGLAMLAFFYNIEKISLATATAFSQCAPIYTVLLSPLLLKEKLKRSALISACIGLVGVVLIS--DPSVENVGLVEIIMGILSGIFVSLAYITLRDLREYY--DKQAVILAFAFGMSLLGLAGMFID--IPFLSTGVHIPRKEDILWISLIGISGTLGQYFLTYAYMNAPAGIIAPIEYTRIVWGLLFGLYLGDTFLDLKSSLGVALILCSGLLIALPALLKELKK........... 297
2 -9.090IDP05290 gene: sugE; quaternary ammonium compound-resistance protein [Clostridium difficile 630] CD0488 [Peptoclostridium difficile 630]  ali follow..  8  4..........................................................................................................................................................................................................................LFLFVAGLFEVFWAFQLKNSHGFSKLTPSILTVVGMIVSFYFLSLALKHLPLGTSYAIWTGIGTVGTAIVGMAILNEPISISRIACIGFIVVGIV........................ 98
3 -6.470IDP91323 hypothetical protein VV2_0301 [Vibrio vulnificus CMCP6] VV2_0301 [Vibrio vulnificus CMCP6]  ali follow..  7  63....................................................................................................................................................................................................................................................AKGVGFVNGILKAKDKRLSFDEQEETQLTGAIAPVLIKYGAEPPPWL-YGPELT----LLATVSIIGFGKYAMMQEIQKEEALKRAAIIQAAK 152
4 -6.070IDP05580 putative lipoprotein [Bacillus anthracis str. Ames] BA_0936 [Bacillus anthracis str. Ames]  ali follow..  6  1......................................................................................................................................................................................................................................................................................MLKKLGILVLGSAVA-----------LSLVACGDSTKEASNEKKEEPKQEAKKENKENK 48
5 -5.850IDP04470 putative amino acid antiporter [Yersinia pestis CO92] YPO2306 [Yersinia pestis CO92]  ali follow..  8  236.................................................................................................LAVISALSVYLLITLLSLGVVPRAELAGMRNPSMAGIMVEMI-------------IIIATGLIISVCGAYLSWTIMAAEVPMVAAKHGAFPKIFRHQNKN------APAQSLWLTNSAVQVALVLIWLTGSNYNTLLT-----------IASEMILVPYFLVGAFLFKVALKRQ---DWRLIVAASGACLYGLWLIYAAGLVYLLLSVLLYAPGLLVFIYARKGHEGLR........... 437
6 -5.720IDP05012 cell wall surface anchor family protein [Bacillus anthracis str. Ames] BA_5070 [Bacillus anthracis str. Ames]  ali follow..  12  101..........................................................................................................................................................................................................................................................................KKEVAKPAVQGEKLPNTASNNVAMMA----------LSACLVGIGTLFGLKRRNKVKA............. 148
7 -4.860IDP92691 hypothetical protein SAUSA300_0346 [Staphylococcus aureus subsp. aureus USA300_FPR3757] YP_493060 [Staphylococcus aureus subsp. aureus USA300_FPR3757]  ali follow..  7  314......................................................................................................................VMIIFLREVLLIVMTLTTMTRNVKDKKGTASVAIAGLVLSIILAITFVETLGNSGILRESMEAGLGIVAVILMFIVKRWNDMIKNMYANAISNGNLVLLATIGLISVLREGVEVIIFYMGMIGELATKDFIIGIALAIVILIIFALLFRFIVKIPIFYIFRVLSIFIFIMGFKMLGVSIQKLQLLGAM............................... 518
8 -4.700IDP91361 NhaP-type Na+/H+ and K+/H+ antiporters [Vibrio vulnificus CMCP6] VV1_2840 [Vibrio vulnificus CMCP6]  ali follow..  8  8....................LALLFVIIALFIGALVRHLLKG--SQVPYTVALLILGIAIGLAHRGNAFTDNYTLIGETLSLASEIDPHLFLFLFLPTLIFESA-----------FAMEVHLFRRMFTQIVILAVPGLM------------LAIWLTAELVAWVLPEHWQWSWALCLMFGALISATDPVAVVALLKEVSSRKR---ESLLNDGTAIVFFSLFYGWVLMEFSNPGEAITAPPWQAVAQFFVVVFVGLAVGLILGGLCILWIDRVFN---MIEISLTIAAAYSAF---SENFHVSGVAVVTLAIMFASVGRTRISPEVAG......... 293
9 -4.660IDP91318 biopolymer transport protein [Vibrio vulnificus CMCP6] VV2_0362 [Vibrio vulnificus CMCP6]  ali follow..  10  97..................................................................................................................................................................................................................................................................HLAFIKVLVAICPM-LGLLGTVTGMISVFDVMATQGSLATLPTMAGMVAALVGMFVHARLVKLCQNREVKLEQSLRSDS 185
10 -4.340IDP95377 set238a-014 [Vibrio cholerae]  ali follow..  9  724.....................................................................................................................................................WDVLSFILVCFRTFRAEVTGALSGIFGFAQGVRAATDMAAIKLVSSKVSQLVYGANLGKWTTYLGGSAYFFGIISSTLKVASAYDAFIQGDNKAAISLVAEGALVR--VNYVGLRESGKVVYTVFKADKAVRAGIWAKNGANLLS-RLTLIGIALSAIQLGATVWYNRTSLSQYLT............ 912
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.