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Query: [MU] KOG2516 Protein involved in dolichol pathway for N-glycosylation (mannosyltransferase family), from COG1018

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRWSVLDTVLLTVISFHLIQAPFTKVEESFNIQAIHDILTYSVFDISQYDHLKFPGVVPRTFVGAVIIAMLSRPYLYLSSLIQTSRPTSIDVQLVVRGIVGLTNGLSFIYLKNCLQDMFDEITEKKKEENEDKDIYIYDSAGTWFLLFLIGSFHLMFYSTRTLPNFVMTLPLTNVALGWVLLGRYNAAIFLSALVAIVFRLEVSALSAGIALFSVIFKKISLFDAIKFGIFGLGLGSAISITVDSYFWQEWCLPEVDGFLFNVVAGYASKWGVEPVTAYFTHYLRMMFMPPTVLLLNYFGYKLAPAKLKIVSLASLFHIIVLSFQPHKEWRFIIYAVPSIMLLGATGAAHLWENMKVKKITNVLCLAILPLSIMTSFFISMAFLYISRMNYPGGEALTSFNDMIVEKNITNATVHISIPPCMTGVTLFGELNYGVYGINYDKTENTTLLQEMWPSFDFLITHEPTASQLPFENKTTNHWELVNTTKMFTGFDPTYIKNFVFQERVNVLSLLKQIIFDKTPTVFLKELTANSIVKSDVFFTYKRIKQDEKTDLast
1 -11.400IDP04526 putative inner membrane protein [Salmonella typhimurium LT2] STM1637_1_516 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  12  15LRKIKYKYHVCLIVIFSVLIRLLF--DEASSVLISR-------HSVDNLLFHAAFDVHPPLYY------------LLLHDWMILWGDSIAAV--SLSLLFGILTVVLVIALTRWL---------------------ANERTALLAGWFAALMPMAVHYSQETRMYALMGMLTLAAALALMMHNRYLVAYALLMTFSFYTHYFTLFTLIAHWIAVTILSCQSHKTACYLKLPGWWFANLAIAVA---------YLPWLPVLFNLLTHLAQLRAGNDIGWFFTGNNGQGFPSFILWLAVGGFIGTERYQLILFCNLVIPVMLVFIISWWMPLRYFFFSSLSIPPLLAVLLTRAKKA--------------VCGFWFILFTLLFGYGSYHNNPEHIDEFKPLVNYINTRHQPNDAVV......................................................................................................................................... 405
2 -11.000IDP04349 putative inner membrane protein [Salmonella typhimurium LT2] STM0557_1_550 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  9  14....IAILIVFSLVYSIGFITPMNSDD--YTYALRELSL----SVKMHYLGWS----------------------------------GRVVSDTISTSLLKFFSPHIYNAINSAALTLMVLCWTMIPATLTKSSPSPYVMIFLFFLYFVANP--TNFWLVGSANYLWTNMFIAIYILISIYLSNGKKVYAISSIFAGCSNENTSLVVVLISVAYFFIMNRNKYLLI------GVFGSAIGAGV-------LLLAPGNLSRASTIQDWYNQPLAWRVLEHFSERLPSAMGAYWQVYIAFIILLISVVLSRLFMLGAIAANVAFLASPAMPSRALNGALCFMILSISFVAHSAFTKFNKASIYLSVTTYAMAFLYFIPSYILYYSSIKSISK----QTEIREEIIDRAKHNKQDQAIIPDYY----FPPVLHAGPSLDTFNMSRYYGIDLKITAPGFFDYSRAFNFKPLNIN................................................................................. 441
3 -9.570IDP91390 Lipid A core - O-antigen ligase [Vibrio vulnificus CMCP6] VV1_1426 [Vibrio vulnificus CMCP6]  ali follow..  9  50LSFNPTTWIAFSFVFALGCYQLAS--QQYLRYSKLTIGLF--------------------VSCLILTVPLFYANSHYMQSVSRLVGLWAGFGFFVLQRLLWLVVLAVVIESFIGYYQFLWLKPGNWMGYDTLSNRPYGNVMASFLATGLIISGYLLARQPHKYNKHLSEITLLYLIP----------LLTVPLIVVLASRTGWLAAMIATLLLLPYLYRFGTKIRFWGWLGSIILGLSLSGAL--YTFPQ----ALDMLIEKPFTG----YGYGNFESAYTLGLVPLLGIFLAAILVLNRIYSAKKGTRLAMFALFVPIVLHSQL---EYPFYHSAA-LIFIILIYWVDQRVAKVKSVNFSRISKTALRIASLVVPILTTFYMLSALHTNY................................................................................................................................................................ 465
4 -6.540IDP06148 hypothetical protein jhp1155 [Helicobacter pylori J99] NP_223873 [Helicobacter pylori J99]  ali follow..  8  25..............................................................................................FVKITADYFSPMENVFYRSITMTLLLLLIYPFKPYRLKSYKQGGFKKLAFRVVVGGLAMLAFFYNIEKIS-IYTVLLSPLLLKEKLKRSALISACIGLVGVVLISDPSIFVSLAYITLRDLREYYDKQAVILAFAFGMSLLGLAGMFIDIPFLSTGVHIPRKEDILWISLIGISGTLG----QYFLTYAYMNAPAGII----------------APIEYTRIVWGLLFGLYLGDTFLDLKSSLGVALILCSGLLIALPALLKELK................................................................................................................................................................................................ 296
5 -6.450IDP00530 gene: ccmC; putative heme exporter protein C YPO2736 [Yersinia pestis CO92]  ali follow..  12  1..............................................................................................................................................MWKWFHQFAKPERLYPLCGRLIPWFGGGAIICLAVGWVWQQGDSFRIMYLHVPAAIWSMGIYMSMAIAAFVGLVWQIKMADNLVAAMAPVGAVLTFIALVTGS-AWGK------------------PMWGT--WIW------ARLTSELVLLFLY------------------LGVIALYNAFDDRKLA-ILVLVGVVNL................................................................................................................................................................................................................. 170
6 -6.200IDP95152 mucoviscosity-associated protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002920361 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]  ali follow..  8  49.......LGPLICFVTIFSKVILKDKVSLVRFKFADGIIF--------------------GFFLLYILSAFFSNDLVIGLEFSLRYLFLGASFYFFARFS-YMHGILITGFIVAVTALMQNNSSSQYTMRLTVGDSSTIPLAITLGQAAVVNVYYIMTQKGKKSIPYLISFLPIVYAFLAANTRSVVIGFILALLLLLSKNFGKVLLAISGMAVFIGYIITNNAELVARLFSTFGHIAIATFYEHPILG-----RFNMYPHNIFFESAAETGIVGILLTVVDVKTPVVAAMFIFLFFVSLVSLSFWMHKALFTSIALIFITYGNLEKGQNNF........................................................................................................................................................................................................................... 408
7 -6.120IDP95377 set238a-014 [Vibrio cholerae]  ali follow..  13  724.........................................................................................WDVLSFILVCFSISNAYKALEVTGALSGIFGFAQGVRAATDMAAIKLVSSKVSQLVYGANLGKWTTYLGGSAYFFGIISSTLKVASAYDAFIQGDNKAAISLVAEGALVRVNYVGLRESGKVVYTVFKADKAVRNLLSLSIRLTLIGIALSAIQ-TVWYNRTSLSQYLTWFAN------SQWGKSPSSSSLEQSNLQL--------------------ARISAKPIV------EIREFEQGKALILSFPGISRETLDGAG.......................................................................................................................................................................................................... 971
8 -5.990IDP00408 gene: ccmB; heme exporter protein B YPO2735 [Yersinia pestis CO92]  ali follow..  12  20.....................................................................................................................................................................................................IVNPLWFFLIVITLFPLGIGPEPQLLARIAPGIVWVAALLASLLSLERLFRDDFYDGSLEQLLLLPTPLPLTVLGKVCAHWVVT-GLPLLVLSPLVALLLSLDVNTAIAMGLTLLLGTPTLSFIGAIGVKGGVLLSLLVLPLVLIFATAAIDAASMAMPIDGYLAILGAMLAGSVTLAPFATAAAL........................................................................................................................................................................ 214
9 -5.930IDP00754 gene: spa; immunoglobulin G binding protein A precursor SACOL0095 [Staphylococcus aureus subsp. aureus COL]  ali follow..  8  2......................................................................................................................................................................................................................................................................................................................................KKKNIY---SIRKLGVGIAS------------------VTLGTLLISGGVTPAANAAQHDEAQQNAFYQVLNMPNLNADQRNGFIQSLKDDPSQSANVLGEAQKLNDSQAPKADAQQNNFNKDQQEILNMPNLNEAQRNGFIQSLKDDPSQSTNVLGEAKKLNESQAPKADNNFNKEQQNAFYEILNMPNLNEEQRNGFIQSLKDDPSQSANLLSEAKKLNESQA 209
10 -5.920IDP00229 putative O-antigen biosynthesis protein YPO0417 [Yersinia pestis CO92]  ali follow..  11  65.......................................................................................VYLPAAMFVLLALSLLNSYGPDMVGKYKKLLYILPLALFFMNQPRLIKLFCTGFLVANAVILAGSLAVGVFKLQITQNFFMALAALLWLVLAFQHQGWKRWGYSVLVVAASYRTGYVALIVGLGVWLFFSLGNRQRLTLVVLGALAFAALIFSMGQRSAFVVE----AARLIKESPILG----HGANPHNQYLLSGVIGLFLFLAWVICCYRVIWQQTPALRNVLLAVLTSYMACNFLLDSSEGHLFMIFVAVLAGYSVSGSQSIAGKRLPT................................................................................................................................................................................................ 410
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.