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Query: [S] KOG4147 Uncharacterized conserved protein, from COG1018

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAPGEVTITVRLIRSFEHRNFKPVVYHGVNLDQTVKEFIVFLKQDIPLRTNLPPPFRNYKYDALKIIHQAHKSKTNELVLSLEDDERLLLKEDSTLKAAGIASETEIAFFCEEDYKNYKANPISSWLast
1 -5.330IDP02477 hypothetical protein YPO2035 [Yersinia pestis CO92] YPO2035 [Yersinia pestis CO92]  ali follow..  13  39AGTHCIEIDIHLTAD------QLVVTHDHRVDRVVEQLTYPQLLEFDFGMKYHPDFAGTRIPLLADVLRWAVKNGMGLIVEAKQREFVAAMVAMLRELPEAISHIQMLGFNHALINRVKA...... 163
2 -5.270IDP05708 hypothetical protein lmo2839 [Listeria monocytogenes EGD-e] lmo2839 [Listeria monocytogenes EGD-e]  ali follow..  14  28.GSKEVTIEFKLIADFEKEN------PTIKIKQIPVEEDAFNTKVVTLARSGKLP------AVMEVSQDFAKVMDKDELIDQDA-NLVRSEDGKSYIAAPLSGWVQGIWYNKKALADAGFEEPKNW 171
3 -5.160IDP02730 gene: panD; aspartate alpha-decarboxylase [Francisella tularensis subsp. tularensis SCHU S4] FTT1391 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  10  1.......MLISVLKSKISY-------------ATVTGKDLFYVGSITIDSEIMKQANIIENEKVQVVNLNNGERLETYVIKGEPNSKTIALNGPAARRCEIGDQLFIISYTQVDPTRENIKPKL.. 104
4 -5.150IDP05441 hypothetical protein lmo2809 [Listeria monocytogenes EGD-e] lmo2809 [Listeria monocytogenes EGD-e]  ali follow..  11  22.........INVVYSDEAKRVFENGLKNLDAEALTGK------------------INTYEIDKKSIKQNPMGGINVTLHVNGDSE-TLNKADDKKLIDDGGGNSAKLE.................. 108
5 -4.930IDP95194 gene: wafL; WafL [Acinetobacter nosocomialis] AHB32668 [Acinetobacter nosocomialis]  ali follow..  16  1MIILSVIVPIYKVEEYLISGVEIILVNDGTPDTSMALARNYIAQKYPHFENQFVFIDQKNQGQSVARNNALKIAKGEYVGFLDSDDYLLPNYFYELMKVINEKNVEIIHFNAKQYTE......... 128
6 -4.710IDP05525 putative sugar transporter, substrate-binding lipoprotein [Clostridium difficile 630] CD2550 [Peptoclostridium difficile 630]  ali follow..  12  63..........PILDKFEEKNNCEVDLQIIPWDNYSEKFATAI------SAGEGPDVGYMYAEMYPQFIESGAVEDLTNYATKEDKEQSIYIKTSEMMGG--AANPGVLYYNKDILEKLGEKPPKTW 177
7 -4.700IDP02665 gene: ksgA; dimethyladenosine transferase [Francisella tularensis subsp. tularensis SCHU S4] FTT0469 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  16  103........KIKLIGNLPYNISSPILFKVIKDSDKIVDAHFMLQKEVVERIVSLPNSK--SSGRLSVILQYH....................................................... 163
8 -4.670IDP05592 putative lipoprotein [Bacillus anthracis str. Ames] BA_3194 [Bacillus anthracis str. Ames]  ali follow..  12  46...ENVMFEQKEVRKLEISPVNSKSSNQVVNTENIKTIFTSMESAEKKTLLLDQEAKNYIHSKMKVTYQDNSIQEFFVWIESDSDIVIAKETHGEGYDLREDNSKKIIQFFEKEF........... 160
9 -4.640IDP93895 transcriptional regulator YbtA [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001006814 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  11  192......MLSLVLDEHREDASCLSCHFNPMERQK-LLRAKDLLLADLTQAPGVAELARESGLSVLKIFRVLFNNSVYGLFERMQEARRRLANGNTSVMTVAAD--ANASHFSAAFQKQFGVTPST.. 314
10 -4.630IDP00024 Dimethyladenosine transferase (S-adenosylmethionine-6-N`, N`-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (High level kasugamycin resistance protein ksgA) (Kasugamycin dimethyltransferase) BA_0039 [Bacillus anthracis str. Ames]  ali follow..  14  120........DVMVVANLPYYITTPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTE....................................................... 182

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 6 4 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.