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Query: [S] COG3463 Predicted membrane protein, from COG1018

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKSLIDKKLLVIIFIAYTFIIFKTCLVLYENFSYKSLDLGIFSQSLYSTLNGKFMYNTVEAQLYSAPNHFAVHFQPILLLLLPVYAIMPSPVVLLLIQAIFLALSATLALLIACEELNHREAILVASLYIFNSSLLGIALFEFHPVSLAVPLFFIAYMLLKRGKMKLFYLTSVLILLTKEDSFLGVVSLSLWKILMDGLNPESFRKNRGLILLSIASMMYGIIVIKVVIPHLGMGYIYESLYSEFELTRRKLLYFIVFNASFGFLTFLSSKGLVSVALPWLESMLSSRDTQTMIGFHYPYMLLPLSYLVAIEGFKKSKKVAVSLIVAGILTSMATIPITFKPPKAENPLIHFAVLKPIPGKDASWEAITIVKTLEGPIYTQPEFYPHLSTRIDVYVYPKGIKPRVILVNLNTWNGKRAIKRLKDFRIKLEEYKTVFKKDGVVIFIRKALast
1 -17.100sp|Q92521|PIGB_HUMAN GPI mannosyltransferase 3 OS=Homo sapiens GN=PIGB PE=2 SV=1  ali follow..  10  61.......IYLLLFTIALRILNCFLV---WQSLEVSHHMVFNYGYLTWEWTE------RLRSYTYPLIFASIYKILHLLGKDSVQLLIW----IPRLAQALLSAVADVRLYSLMKQLENQEVARWVFFCQLCSWFTWYCCTRTL-TNTMETVLTIIALFYYKSMNSVKYSSLVALAFIIRPTAVILWTPLLFRHFCQEPRKLDLILHHFLPVGFVTLSLSLMIFLKFNVLQNWGTFYGSHPWHWYFSQGFPVILGTHLPFFIHGCYLAPKRYRILLVTVLWTLLVYSMLSHK---EFRFIYPVLPFCMVFCGYSLTHLKTWKKPALSFLFLSNLFLALYTGLVHQRGTLDVMSHIQKVCYNNPNKSSASIFIMMPCHSTPYYSHVHCPLPMREADVFYLNPLNPTHLIT--------SILEEEISAFLISSNYKRTAVGSHIYVYERKL 544
2 -14.400sp|Q8TCJ2|STT3B_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Homo sapiens GN=STT3B PE=1 SV=1  ali   11  74........FTILFLAWLAGFSSRLFAVIRFESIIHEFDPWFNYRSTHHLASHGFYEFLNWFDERAGRIVGGTVYPGLMITAGLIHWIL---DVCVFLAPTFSGLTSISTFLLTRELWNQGAGLLAACFIAIVPGISRSVAGSFDNEGIAIFALQFTYYLWKTGSVFWTMCCCLYMVSAWGGYVFIINLIPLHVFVLLLMQRYSKRVYIAYSTFYIV........................................................................................................................................................................................................................................ 300
3 -13.500sp|Q9BV10|ALG12_HUMAN(removed signalp:1-28) Dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichyl-alpha-1,6-mannosyltransferase OS=Homo sapiens GN=ALG12 PE=1 SV=1  ali follow..  2................YTKVEESFNLQATHDLLYHWQDLEQYDHLEFP---------GVVPRTFLGPVVIAVFSSPAVYVLS--LLEMSKFYSQLGVLGLGVIFGLWTLQKEVRRHFGAMVATMFCWVTAMQFHLMFYCTRTL-PNVLALPVVLLALAWLRHEWARFIWLSAFAIIVFRVELCLFLGLLLLLALGNRKVSVVRALRHAVPAGILCLGLTVAVEGKVLWYNTVLNKSSNWGTSPLLWYFYSALPRGLGCSLLFIPLGLVDRRTHAPTVLALGFMALYSLLPHKE--LRFIIYAFPMLNITAARGCSYLLNNYKKSWLYKAGSLLVIGHLVVNAAYSATALYVSHFNYPGGVAMQRLHQLVPP-QTDVLLAAQTGVSRFLQVNSAWRYDKREDVQP--ILMEAAPGLLALYRDTHRVLASVVGTT-VHLQTKLVLLERLP 457
4 -11.700sp|Q6ZXV5|TMTC3_HUMAN Transmembrane and TPR repeat-containing protein 3 OS=Homo sapiens GN=TMTC3 PE=1 SV=2  ali   13  1MANINLKEITLIVGVVTACYWNSLF-------CGFVFD--LDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLYLLSEKPMSYHLLNMIFHAVVSVIFLKVCKLFLDNKSSVIASLLFAVHP-TEAVTGVVGRAELLSSIFFLAAFLSYTRSKIALTVFLVAVATLCKEQGITVVGICCVYEVFIAQG......................................................................................................................................................................................................................................................... 208
5 -11.400sp|Q9H6U8|ALG9_HUMAN Alpha-1,2-mannosyltransferase ALG9 OS=Homo sapiens GN=ALG9 PE=1 SV=2  ali   63.......KCLLSARLCAALLSNISDCDETFNYWEPTYGEGFQT---WEYSP----AYAIRSYAYLLLHAWPAAFHARILQTNKILVFY----FLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLSTGMFCSSSAFL-PSSFCMYTTLIAMGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVI................................................................................................................................................................................................................................... 269
6 -10.600sp|Q9H3S5|PIGM_HUMAN GPI mannosyltransferase 1 OS=Homo sapiens GN=PIGM PE=1 SV=1  ali follow..  11  14LKVAPAGVFGVAFLARVALVFYGVFQDRTLHVRYTDIDYQVFTDAARFVTEGRSPYLRAT------------RYTPLLWLLTPNIYLSELFGKFLFISC--LLTAFLLYRLLLLKGLGRRQACGYCVFWLLNPLPMAVSSRG-NADSIVASLVLMVLYLIKKRLVACAAVFYGFAVHMKIYPVTYILPITLHLLPDRRQFRYTFQACLYELLKRLCNRAVLLFVAVAGLTFFALSFGFYYEYGWEFLEHTYFYHLTRRDIRHNFSPYFYMLYLAAFLPQLILLSAVSFAYYRDLVFCCFLHTSIFVTFNKV......................................................................................................................................... 330
7 -10.300sp|Q9NUD9|PIGV_HUMAN GPI mannosyltransferase 2 OS=Homo sapiens GN=PIGV PE=1 SV=1  ali follow..  11  13........RFAVSCRILTLMLQALFNAIIPDHHAEAWDAEHFLFI---AEHGYLYEHNFA-------------FFPGFPLALLVGTELLRPLR-ASLNFLFFMLAAVALHDLGCLVLCPHQSFYAALLFCLSPA--NVFLAAGYSEALFALLTFSAMGQLERGRVWTSVLLFAFATGVRSN-GLVSVGFLMHSQCQGFFSSLTMLNPLRQLFKLMASLFLSVFTLGLPFALFQYYAYTQFCLPGSARPIPEPLVQLAVDKGYRIAEGNEPPWCFWDVPLI-YSYIQDVYWNVGFLKYYELKQVPNFLLAA.......................................................................................................................................... 332
8 -10.100sp|Q5T4D3|TMTC4_HUMAN Transmembrane and TPR repeat-containing protein 4 OS=Homo sapiens GN=TMTC4 PE=1 SV=2  ali   12  20..............FWAKLVVGSVAIVCFARSYDGDFDSEAINKDLQAETPLGDLWHHDFWGSRLSSNTSHKSYRPLTVLTFRIYYLS-HPVGFHVVNILLHSGISVLMVDVFSVLFGGRASLLAALLFAVHP-TECVAGVVGRADLLCALFFLLSFLGYCKAFVLLSIFLGAVAMLCKEQGITVLGLNAVFDILVIGK......................................................................................................................................................................................................................................................... 241
9 -9.610sp|Q6ZPD9|D19L3_HUMAN Protein dpy-19 homolog 3 OS=Homo sapiens GN=DPY19L3 PE=2 SV=1  ali   12..........................................................................................................................................................................................................................................................ETAYNLIHTILFGFLALSTMRMKYLWTSHMC--VFA------------SFGLCSPEIWELLLKSVHLYNPKRICIMRYSVPILILLYLCYKFWPGMMDELSELREFYDPDTVELMNWINSNTPRKAVFAGSMQLLAGVRAPEEVHALLRSFGTDYVILEDSICYERRHRRGCRLRDLLDAYFTRVFQNKTFHVYKLSR 264
10 -9.540sp|Q92685|ALG3_HUMAN Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase OS=Homo sapiens GN=ALG3 PE=1 SV=1  ali follow..  11  36LREPRYTLLVAACLCLAEVGITFWVIHR---VAYTEIDWKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAG-----FVYIFMGLYYATSRGTDIRMAQNIVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLFNDPVAMVLLFLSINLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGFRGALPKLGICAGLQVVLGLGYLSRSFDLGRQFLFHWTVNWRFLPEALFLHRAFHLALLTAHLTLLLLFALCRWHQIVSTLFTSNFIG---ICFSRSLHYQFYVLPYLLWAM.......................................................................................................................................... 375
11 -9.430sp|Q9UKY4|POMT2_HUMAN Protein O-mannosyl-transferase 2 OS=Homo sapiens GN=POMT2 PE=1 SV=2  ali   12  59...........ALLALVTLLSFATRFHRLDEPPHICWDETHFGKMGSYYINRTF--------------FFDVHPPLGKMLIGLAGYLSGSYMGMRGFCAFLGSWLVPFAYLTVLDLSKSLSAALLTAALLTFDTGCLTLSQYILLDPILMFFIMAAMLSMVKYNLSLTGVSLAGALGVKFVGLFIILQVGLNTIA............................................................................................................................................................................................................................................................. 259
12 -9.360sp|Q8N394|TMTC2_HUMAN(removed signalp:1-21) Transmembrane and TPR repeat-containing protein 2 OS=Homo sapiens GN=TMTC2 PE=2 SV=1  ali   12  43........................................................................SYRPLCTLSFRLHAIGGNPWSYHLVNVLLHAAVTGLFTSFSKILLGDGWTFMAGLMFASHP-TEAVAGIVGRADVGASLFFLLSLLCYIK--FLGSGLCAGCSMLWKEQGVTVLAVSAVYDVFVFHR......................................................................................................................................................................................................................................................... 185
13 -9.300sp|Q2PZI1|D19L1_HUMAN Protein dpy-19 homolog 1 OS=Homo sapiens GN=DPY19L1 PE=2 SV=1  ali   1...........................................................................................................................................................................................................................................................LVYHALQLLAYTALGILIMRLKLFLTPHM-------------------------CVMASLICSRQLFGWLFCKVHPGAIVFAILAAMSIQGSANLQTQWNIVGEFSNLPQEELIEWIKYSTKPDAVFAGAMPTMASVKAAEEVKRELIKLKVNYYILEESWCVRRSKPGCSMPEIWDVEDFTTVFQNSVYKVLE... 221
14 -9.120sp|Q9H6U8|ALG9_HUMAN Alpha-1,2-mannosyltransferase ALG9 OS=Homo sapiens GN=ALG9 PE=1 SV=2  ali   1......................................................................................................CICELYFYKAVCKKFGLHVSRMMLAFLVLSTGMFCSSSAFL-PSSFCMYTTLIAMGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVI--VFTPHGPDLYGTEPWYFYLINGFLNFNVAFALALLVLPLTSLM-LGHPYWLTLAPMYIWFIIFFIQPHKE--ERFLFPVYPLICLCGAVALSALQKCYHFVFQRYRLEHYTVTSNWL............................................................................................................ 263
15 -9.050sp|Q9NX78|CN101_HUMAN UPF0679 protein C14orf101 OS=Homo sapiens GN=C14orf101 PE=1 SV=3  ali   10  1.............................................................................................LFVGLLMALT-----VHFEEAATAKERSKVAKIGAFCC-----GLSLCNQHTIILYVLCIIPWILFQLLKKKELSLGSLLKLSL------YFSAGLLPYVHLPISSYLNGDQTTLQGFLTHFLREEYGTFSLAKSEIGSSMSEILLSQVTNMRTELSFNIQALAVCANICLATKDRQNPSLVWLFTGMFCIYSSKPLFMGVVERFWMQSNAVVAVLAGIGLAAVVSETNRVLNSNGLQCLEWLSATLFVVYQIYSNYSVCDQRTNYVIDKFAKNLLTSMPHDAIILLRGD................................................................. 291

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 4   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Flexible structure alignment by chaining aligned fragment pairs allowing twists. Bioinformatics. 2003 Oct;19 Suppl 2:II246-II255.