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Query: [C] COG4074 H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase, from COG1018

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIDMKLAILGAGCYRTHAASGITNFSRACEVAEMVGKPEIAMTHSTITMGAELKELAGVDEVVVADPVFDNQFTVIDDFAYEDVIEAHKEDPEKIMPQIREKVNEVAKELPKPPEGAIHFTHPEDLGFEITTDDREAVADADFIMTWFPKGDMQPGIIDKFIDDIKPGAIVTHACTIPTTKFYKIFEEKHGDLVTKPETLNVTSYHPGAVPEMKGQVYIAEGYASEEAINTLFELGQKARGNAYRLPAELLGPVCDMCSALTAITYAGILSYRDSVTQVLGAPAGFAQMMAKESLEQITALMEKVGIDKMEEHLDPGALLGTADSMNFGASADILPTVFEILEKRKKLast
1 -33.500sp|Q16836|HCDH_HUMAN Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Homo sapiens GN=HADH PE=1 SV=3  ali follow..  10  3........................FVTRQFMRSVSSSSTASASAKKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENLKAGDEFVEKTLST------IATSTDAASVVHSTDLVVEAIVENKVKNELFKRLDKFAAEHTIFSNTSSLQITSIANATTRQD-------RFAGLHFFNPV--PVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCK-DTPGFIVNRLLVPYLMEAIRLYERGDASKEDIDTPMGPFELLDYVGLDTTKFIVDGHEMDAENPLHQPSPSLNKLVAENKFGKKTG-EGFYKY...... 313
2 -28.300sp|Q08426|ECHP_HUMAN Peroxisomal bifunctional enzyme OS=Homo sapiens GN=EHHADH PE=1 SV=3  ali   10  2.....................................................VVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASK-------------MQQSGHPWSGPKPRLTSSV-KELGGVDLVIEAVFEESLKKQVFAELSAVCKPEAFLTNTSALDVDEIASSTDRPH-------LVIGTHFFSPA--HVMKLLEVIPSQYSSPTTIATVMNLSKKIKKIGVVVG-NCFGFVGNRMLNPYYNQAYFLLEEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGGTPARKRGNRRYCPIPDVLCELGRFGQKTG-KGWYQYDKPLGR 288
3 -26.900sp|P40939|ECHA_HUMAN Trifunctional enzyme subunit alpha, mitochondrial OS=Homo sapiens GN=HADHA PE=1 SV=2  ali   13  57............................................PQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDATLTALDRGQQQVFKGLNDKVKK-------------KALTSFERDSIFSNLTGQLDQGFEKADMVIEAVFEDSLKHRVLKEVEAVIPDHCIFSNTSALPISEIAAVSKRPE-------KVIGMHYFSPV--DKMQLLEIITTEKTSKDTSASAVAVGLKQGKVIIVVK-DGPGFYTTRCLAPMMSEVIRILKKLDSLTTSFGFPVGAATLVDEVGVDVAKHVA............................................. 300
4 -25.400sp|Q9Y2S2|CRYL1_HUMAN(removed signalp:1-22) Lambda-crystallin homolog OS=Homo sapiens GN=CRYL1 PE=1 SV=3  ali follow..  11  2..................................................................LFASGGFQVKLYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLSVEEQLSL----------ISGCPNIQEAVEGAMHIQECVPEDELKKKIFAQLDSIIDDRVILSSTSCLMPSKLFAGLVHVK-------QCIVAHPVNPPY---IPLVELVPHPETAPTTVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMS.............................................................. 203
5 -21.900sp|Q08426|ECHP_HUMAN Peroxisomal bifunctional enzyme OS=Homo sapiens GN=EHHADH PE=1 SV=3  ali   10  143............................................SARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASK-------------MQQSGHPWSGPKPRLTSSV-KELGGVDLVIEAVFEESLKKQVFAELSAVCKPEAFLTNTSALDVDEIASSTDRPH-------LVIGTHFFSPA--HVMKLLEVIPSQ............................................................................................................................. 299
6 -14.300sp|P40939|ECHA_HUMAN Trifunctional enzyme subunit alpha, mitochondrial OS=Homo sapiens GN=HADHA PE=1 SV=2  ali   14  3.......................................................................................................................................................SLKHRVLKEVEAVIPDHCIFSNTSALPISEIAAVSKRPE-------KVIGMHYFSPV--DKMQLLEIITTEKTSKDTSASAVAVGLKQGKVIIVVK-DGPGFYTTRCLAPMMSEVIRILQKLDSLTTSFGFPVGAATLVDEVGVDVAKHVAEDGKVFGERFGGGNPELLTQMVSKGFLGRKSG-KGFYIYQEGVKR 195
7 -13.900sp|P31937|3HIDH_HUMAN 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Homo sapiens GN=HIBADH PE=1 SV=2  ali follow..  13  20.............................RLRPAAGSFAAVCSRSVASKTPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDAC-----------------------------------KEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYNGILKKVKKGSLLIDSSTIDPAVSKELAKEVEK------MGAVFMDA-PVSGGVGAARSLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLG.................................................................. 234
8 -12.300sp|Q13423|NNTM_HUMAN NAD(P) transhydrogenase, mitochondrial OS=Homo sapiens GN=NNT PE=1 SV=3  ali   17LSQRKTTVLAMDQVPRVTIAQGYDALSSMANIAGYKAVVLAANHGKVPPAKILIVGGGVAGLASAGAAKSMGAIVRGFDTRAAAL--------EQFKSLGAEPLEVDLKESGEGQGGYAKEMSKEFIEAEMKLFAQQCKEVDILISTALIPGKKAPVLKEMIESMKEGSVVVDLAAEAGGNFETTKPGE----LYIHKGITHIGYTPSRMATQASTLY------SNNITKLLKAISPD............................................................................................................. 252
9 -12.300sp|P40939|ECHA_HUMAN Trifunctional enzyme subunit alpha, mitochondrial OS=Homo sapiens GN=HADHA PE=1 SV=2  ali   10  155.....IDVVKTGISDAGYLCESQKFGELVMTKESKALMGLYHGQVLCKVKHLAILGAGLMGAGIAQVSVDKGLKTILKDATLTALDRGQQQVFKGLNDKVKK-------------KALTSFERDSIFSNLTGQLDQGFEKADMVIEAV....................................................................................................................................................................................................... 298
10 -12.200sp|P52209|6PGD_HUMAN 6-phosphogluconate dehydrogenase, decarboxylating OS=Homo sapiens GN=PGD PE=1 SV=3  ali follow..  11  1MAQADIALIGLA----------------------------------------------VMGQNLILNMNDHGFVVCAFNRTVSKVD---------------------------DFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKA------KGILFVGSGVSGGEEGARYGPSLMPGGNKEAWPHIKTIFQGIAAKCDWVGDEGAGHFVKMVNGIEYGDMQLICEAYHLMKD..................................................................... 207
11 -12.000sp|Q53H96|P5CR3_HUMAN Pyrroline-5-carboxylate reductase 3 OS=Homo sapiens GN=PYCRL PE=1 SV=2  ali follow..  12  1.........................................MAAAEPSPRRVGFVGAGRMAGAIAQGLIRAGK---------------------------------AQHILASAPTDRNLCHFQALGCRTTHSNQEVLQSCLLVIFATK-PHVLPAVLAEVAPVVTTEHILVSVAAVSLSTLEELLPPNTRVLRVLPNLPCVVQ--------EGAIVMARGRHVGSSETNLLQHLLEACG-RCEEVPEAYVDIHTGLSGSGVAFVCA-FSEALAEGAVKMGMPSSLAHRIAAQTLLGTAKMLLHEG-------QHPAQLRSDVCT...................... 236
12 -11.500sp|Q49A26|GLYR1_HUMAN Putative oxidoreductase GLYR1 OS=Homo sapiens GN=GLYR1 PE=1 SV=3  ali follow..  261..........................................GSITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTV------------------------------------NRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVS------RGGRFLEA-PVSGNQQLSNDLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAHVTG-----------QSQQTLLDILNQGQLASIFLDQKCQNILQG-PDFYLKYIQKDLRLAIALGDAVN. 518
13 -10.200sp|P32322|P5CR1_HUMAN(removed signalp:1-26) Pyrroline-5-carboxylate reductase 1, mitochondrial OS=Homo sapiens GN=PYCR1 PE=1 SV=2  ali follow..  17  6.............................................................................................................ASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIPFILDEIGADIEDRHIVV---SCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVV-REGATVYATGTHAQVEDGRLMEQLLSSVG-FCTEVEEDLIDAVTGLSGSGPAYAFT-ALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLHSE-------QHPGQLKDNVSS...................... 207
14 -10.200sp|Q96C36|P5CR2_HUMAN(removed signalp:1-16) Pyrroline-5-carboxylate reductase 2 OS=Homo sapiens GN=PYCR2 PE=1 SV=1  ali follow..  16  16.............................................................................................................ASSPEMNLPTVSALRKMGVNLTRSNKETVKHSDVLFLAVK-PHIIPFILDEIGADVQARHIVV---SCAAGVTISSVEKKLMAFQPAPKVIRCMTNTPVVV-QEGATVYATGTHALVEDGQLLEQLMSSVG-FCTEVEEDLIDAVTGLSGSGPAYAFM-ALDALADGGVKMGLPRRLAIQLGAQALLGAAKMLLDSE-------QHPCQLKDNVCS...................... 217
15 -9.990sp|Q658P3|STEA3_HUMAN Metalloreductase STEAP3 OS=Homo sapiens GN=STEAP3 PE=1 SV=2  ali follow..  12  29...PKVGILGSG----------------------------------------------DFARSLATRLVGSGFKVVV-----------------------------------GSRNPKRTARLFPSAAQVTF-QEEAVSSPEVIFVAVFREHYSS--LCSLSDQLAGKILVDVSNPTEQEHLQHRESNAEYLASLFPKAFNVISAWTLQAGPRDGNRQVPICGDQPEAKRAVSEMALAMGFMPVDMGSLASAWEVEAMPLR...................................................................................... 207
16 -9.820sp|Q13363|CTBP1_HUMAN C-terminal-binding protein 1 OS=Homo sapiens GN=CTBP1 PE=1 SV=2  ali follow..  12  105.IDIKSA--DLGIAVCNVPAASVE-----ETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIR-----ETLGIIGLGRVGQAVALRAKAFGFNVL---------LSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLIDFTVKQMRQGAFLVNTARGGLVDEKALAQALKE--RIRGAALDVHESEPF-GPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRA..................................................................................................... 338
17 -9.760sp|P56545|CTBP2_HUMAN C-terminal-binding protein 2 OS=Homo sapiens GN=CTBP2 PE=1 SV=1  ali follow..  12  111.VDIKAA--ELGIAVCNIPSAAVE-----ETADSTICHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIR-----ETLGLIGFGRTGQAVAVRAKAFGFSVI---------LQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLIDFTIKQMRQGAFLVNAARGGLVDEKALAQALKE--RIRGAALDVHESEPF-GPLKDAPNLICTPHTAWYSEQASLEMREAAATEIRRA..................................................................................................... 344
18 -9.700sp|Q8NFT2|STEA2_HUMAN Metalloreductase STEAP2 OS=Homo sapiens GN=STEAP2 PE=1 SV=3  ali follow..  31...VTVGVIGSG----------------------------------------------DFAKSLTIRLIRCGYHVVI-----------------------------------GSRNPKFASEFFPHVVDVTH-HEDALTKTNIIFVAIHREHYTSLWDLR------VGKILIDVSN-PESNAEYLASLFPDS--LIVKGFNVVSAWALQLGPKDASRQVYICSNNIQARQQVIELARQLNFIPIDLGSLSSAREIENLPLR...................................................................................... 207
19 -9.250sp|Q687X5|STEA4_HUMAN Metalloreductase STEAP4 OS=Homo sapiens GN=STEAP4 PE=1 SV=1  ali follow..  1..............................MEKTCIDALPLTMNSSEKQETVCIFGTGDFGRSLGLKMLQCGYSVVF--------------------------------------SRNPQKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTELT------NGKILVDISN-PESNAEYLAHLVPGA--HVVKAFNTISAWALQSGALDASRQVFVCGNDSKAKQRVMDIVRNLGLTPMDQGSLMAAKEIEKYPLQ...................................................................................... 195

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 3 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.