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Query: [S] COG4984 Predicted membrane protein, from COG1018

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MQNTTLFHLSWRKYLTLLFLLLGTGFFASGVITWIAANWDYFSRFEKLYGVQSLFGVSILLSVFFYYYEAKKKQVTSVLPLVFAFLAAVLLGAIFALIGQTYQTGADPWELFAIWSICQIPFLLLFPNVASALLLLVTANVALSLAISLLGDIVHMTIFLNMLFLVCYEYFGERLRDQNWRILPKIALFILVFAFGWALIVNNSVLLSWLLSAGLVYYYKERRFDFLNLIVLFFYLVVSICTKVLLSSGEDFLSDIFLVTILAFGGTIGAIITLIKWFKWHNPTASRVTWHIYPLFILLIIFCTGLLLITLFFSFGLEDEQDLIYPSILFLIIALVMHFNQKEKADWFDIAIDMFMATGFILYFIFFLFDGENDLYLALMAILSVFLYQLRSSNWLRFLIASLFIIAFLVYIGFFDLRWYAYYEEHLGQFVLSAQQWIILGGLLLYYFFSLSEERPYTIKLLPIAWAMLLVGLAMNLDIFNRWTFLDTAQQTPEMSDLNDWFHVITGYFFTALTSDTWLIKSLHLLISITPIIFFVLISRRFELTKFLYASVLLTLLALCLGFIAVNETLACISLLLLAYLSVSRVLFALALLGVIMNLSYYYYLLSIPLLHKSFLLMGVGIVLALVTFVLLRYNKAPQATLQAESHNTFQPQLast
1 -10.900sp|Q6NV75|GP153_HUMAN(removed signalp:1-26) Probable G-protein coupled receptor 153 OS=Homo sapiens GN=GPR153 PE=2 SV=2  ali follow..  9  1.......................................................................................................................................................................................................................................................................................................WGILSVG-LEFLLCTLAAT-------HMLNVAVPIATYSVVQLRRQRPDFEWNEGLCKVFVSTFYTLTLATCFSVTSLSYH--MWMVCWPVNYRLSNAK--QAVHTVMGIWMVSFILSALPAVGWHDTSERFYT--------------HGCRFIVAEIGLGFGVCFLLLVGGSVAMGVICTAIALFQTLAVQVGRQADRRAFTVPTIVVEDAQGKRRSS------------------------IDGSEPAKTSLQTTGLVTTIVFIYDCLMGFPVLVVSFSSLRADASAPWMALCVLWCS------VAQALLLPVFL-WACDRYRADLKAVREKCMALMANDEESDDETSLEGGISPD 311
2 -10.900sp|P41440|S19A1_HUMAN Folate transporter 1 OS=Homo sapiens GN=SLC19A1 PE=1 SV=3  ali follow..  10  60...........................................................................................................................................................................................................................................................................................TREQVTNEITPVLSYSYL----AVLVPVFLLTDYLRYTPVLLLQGLSFVSVWLLLLLGHSVAHMQLMELFYSVTMAAIAYSSYIFSLVRPARYQRVASVLGQLLVTVGRVSFLNYISLAFLTFSVVLALFLKRPKRSLFFNRDDRGRC--ALRVACGDSVLARMLRELGDSLRRPQLRLWSLWWVFNSAGYYLVVYYVHILWNEVDPTTNSADAASTLLGAITSFAAGFVKIRWARWSKLLIAGVTATQAGLVFLLAHTRHPSSIWLCYAAFVLFRGSYQFLVPIATFQIASSLCALVFGVNTFFATIVKTIITFIVSDVRGLGLPVLYSVYFLI-LSIIYFLGAMLDGLRHCQRGHHPRQPPAQGLRSA 475
3 -10.100sp|Q8NBT3|TM145_HUMAN(removed signalp:1-29) Transmembrane protein 145 OS=Homo sapiens GN=TMEM145 PE=2 SV=2  ali follow..  11  145.............................................................................................................................................................................................................................................................................................................................................................................................................................................DVTFLLIFILIFFLSCYFGYLLKGRQLLHTTYKMFMAAAGVEVLSLLFFCIYWGQYATDGIGNESVKILAKLLFSSSFLIF---------------------LLMLILLGKGFTVTRGRISHAGSVKLSVYMTLYTLTHVVLLIGYGLIGLQVAAYVWFCYAVFYVPFFAAYTLWFFAVPVMAREKIVNGIQLGIHLYAHGV--------MTRPSAANKNFP.. 382
4 -9.760sp|O15354|GPR37_HUMAN(removed signalp:1-26) Probable G-protein coupled receptor 37 OS=Homo sapiens GN=GPR37 PE=1 SV=2  ali follow..  9  235..................................................................................................................................................................................................................................................................................................AYAVMCLSVVIFGTGAVMCIVCHNYYMRSISNSLLANLAFWDFLI-------------------------------------------IFFCLPLVIFHELTKKWLKIVPYIEVASLGVTTFTLCALCIDRF-----------------RAATNVQMYYEMIENCSSTTAKLAVIWVGALLLALPEVVLRQLSKEDLGFSGRAPAERCIIKISPDLPDTIYVLALTYDSARLWWYFGCCLPTLFTITCKRQIQLESQMNCTVVALTILYGFCIIP-----ENICNIVTAYMATGVSQQTMDLLNIISQFLLFFKSCVTPVLL-FCLCKPFSRAFMECCCCCCEECIQKSSTVTSDDNDN.... 559
5 -9.240sp|A6NGB7|TM221_HUMAN(removed signalp:1-24) Transmembrane protein 221 OS=Homo sapiens GN=TMEM221 PE=2 SV=2  ali follow..  23  51......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AALVLVLGFTCLLLAALCGHLGAELA---FLYDCRLLRHVALGLFCCGISVYLAALSIYALLLAASILGSGTLVLVAVLTLLRAARAARRGLHELSPPSFE.. 168
6 -8.920sp|Q9Y219|JAG2_HUMAN(removed signalp:1-23) Protein jagged-2 OS=Homo sapiens GN=JAG2 PE=1 SV=3  ali   19  9.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LLVPVLCGAFSVLWLACVVLCV-WWTRKRRKERERSRLP-ANNQWAP. 57
7 -8.910sp|Q8WXS5|CCG8_HUMAN Voltage-dependent calcium channel gamma-8 subunit OS=Homo sapiens GN=CACNG8 PE=2 SV=3  ali follow..  10  1.............................................................................................................................................................................................................................................................................................................................................................................................................................MESLKRWNEERGLWCEKGVQVLLTTVGAFAAFGLMT---------IAISTDYWLYTRALICNTTNLTAGGDDGTPHRGGGGASEKKDPGGLTHSGLWRICCLEGLKRGVCVKINHFPELLRVVRASSIFPILSAILLLLGGVCVAASRVYKSKRNIILGAGILFVA----AGLSNIIGVIVYISANAHYSYGWSFYFGGLSFILAEVIGVLA-VNIYIERSREAHCQSRSDLLKAGGGAG 250
8 -8.820sp|O15321|TM9S1_HUMAN(removed signalp:1-32) Transmembrane 9 superfamily member 1 OS=Homo sapiens GN=TM9SF1 PE=2 SV=2  ali follow..  10  265............................................................................................................................................................................................................................................................................................................VF-PYRGLLCAVLGVGAQ----FLALGTGIIVMALLGMFNVHRHGAINSAAILLYALTCCISGYV------------------SHFYRQIGGERWVWNIILTTSLFSVPFFLTWSVVNSVHWANGSTQALPATTILLLLLTVIGGIFGKNNASPFDAPCRTKNI-------EIPPQPWYKSTVIHMTVGGFLPFSAISVELYYIFATVWGREQYTLYGILFFVFAILLSSIALTYFQLSGE-SVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFL-MLGTISFFSSLKF---IRYIYVNLKM.................................... 573
9 -8.510sp|Q8TAZ6|CKLF2_HUMAN CKLF-like MARVEL transmembrane domain-containing protein 2 OS=Homo sapiens GN=CMTM2 PE=2 SV=1  ali follow..  15  77...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................DSNKEFWLLGHAEI-----------KIRSLGCLIAAMILLSSLTVHPILRLIITMEISFFSFFILLYSFAIHRYIPFILWPISDLF---NDLIACAFLVGAVVFAVRSRRSMNLHYLLAVILIGAAGVFAFIDVCLQRGKKAKKHMLVPPPGKEKGPQ 224
10 -8.470sp|Q92521|PIGB_HUMAN GPI mannosyltransferase 3 OS=Homo sapiens GN=PIGB PE=2 SV=1  ali follow..  12  64......................................................................................................................................................................................................................................................................................................LLFTIALRILNCFLVQTSFVPDEERLRSYTYPLIFASIYKILHLLGKDSVQLLIWIPRLAQALLSAVADVRLYLENQEVARWVFFCQLCSWFTWYCCTRTLTNTMETVLTIIALFYYPLEGSKSMNSVKYSSLVALAFIIRPTAVILWTPLLFRHFCQEPRKLDLILH-LPVGFVTLSLSLMIDRIF----------LVQFNFL--KFNVLQNTFYGSHPWHWYFSQGFPVI--LGTHLPFFIHGCYLAPKRYRILLVTVLWTLLVYSMLSHKEFRFIYPVLPFCMVFCGYSLTHLKTWKKPALSFLFLSNLFLALYTGLVHQRGTLDVMSHIQKVCYNNPNKSSASIFIMMPCHSTP. 443
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Multiple flexible structure alignment using partial order graphs. Bioinformatics. 2005 Mar 3;