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Query: [D] KOG4259 Putative nucleic acid-binding protein Hcc-1/proliferation associated cytokine-inducible protein, contains SAP domain, from COG1018

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPESDVTKMKVADLKRELKLRGLAVNGNKTELQDRLQTALLEGDLSLEDSAIADAIDDDDVSFTDEDEHKLLGDENDDELLKSPVSTPTTVAIPDLLAEEKTSSAPDAAAPTKKIVLKRNNSQQSTGTVASTGTTPSKENEAPAAAASDSTGETPTKKHKPIVVGPKTEGEKPSGDKKLNQLTAQERLELRAKKFGITPPAVANTATAVAVAINKSSSASITANKGNKETEEQQKEALKKRAERFGFVVPDKAPTSKADDRLQKRKERFGAGAVSAATTTPTTTESKDAWSEKARARLERFKTAPSTNLast
1 -43.200sp|P82979|SARNP_HUMAN SAP domain-containing ribonucleoprotein OS=Homo sapiens GN=SARNP PE=1 SV=3  ali follow..  25  1METVELHKLKLAELKQECLARGLETKGIKQDLIHRLQAYLEEHAEEEANEEDVLGDETEEEETKPIELPVKEEEPPEKTVDVAAEKKVVKITSEIPQTERMQKRAERFNVPVSLESKKAARAARFGISSVPTKGLSSDNKPM------------------------------------------------------------------------------------------VNLDKLKERAQRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSAGTGT------TEDTEAKKRKRAERFGIA.... 210
2 -32.200sp|Q1KMD3|HNRL2_HUMAN Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Homo sapiens GN=HNRNPUL2 PE=1 SV=1  ali   18  1...MEVKRLKVTELRSELQRRGLDSRGLKVDLAQRLQEALDAEMLEDEAGGGGAGPGGACKAEPRPVAASGGGPGGDEEEDEEEEEEDEEALLEDEDEEPPPAQALGQAAQPPPEPPEAAAMEAAAEPDASEKPAEATAGSGGVNGGEEQGLGKREEDEPEERSGDETPGSEVPGDKAAEEQGDDQDSEKSKPA.................................................................................................................. 191
3 -30.800sp|Q00839|HNRPU_HUMAN Heterogeneous nuclear ribonucleoprotein U OS=Homo sapiens GN=HNRNPU PE=1 SV=6  ali   25  3SSPVNVKKLKVSELKEELKKRRLSDKGLKAELMERLQAALDDEEAGGRPAMEPGNGSLDLGGDSAGRSGAGLEQEAAAGGDEEEEEEEEEEE........................................................................................................................................................................................................................ 94
4 -30.400sp|Q9BUJ2|HNRL1_HUMAN Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Homo sapiens GN=HNRNPUL1 PE=1 SV=2  ali   15  1...MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDERELDADDEPGRPGHINEEVETEGGSELEGTAQPPPPGLQPHAEPGGYSGPDGHYAMDNITRQNQFYDTQVIKQENESGYERRPLEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEENRGRGYFEHREDRR.................................................................................................................. 191
5 -30.100sp|Q9NWH9|SLTM_HUMAN SAFB-like transcription modulator OS=Homo sapiens GN=SLTM PE=1 SV=2  ali   40  17AEGKKITDLRVIDLKSELKRRNLDITGVKTVLISRLKQAIEEEG........................................................................................................................................................................................................................................................................ 60
6 -28.800sp|Q969V6|MKL1_HUMAN MKL/myocardin-like protein 1 OS=Homo sapiens GN=MKL1 PE=1 SV=1  ali   51  195...ANLDDMKVAELKQELKLRSLPVSGTKTELIERLRAYQDQ.......................................................................................................................................................................................................................................................................... 233
7 -28.800sp|Q14151|SAFB2_HUMAN Scaffold attachment factor B2 OS=Homo sapiens GN=SAFB2 PE=1 SV=1  ali   36  30.....LSELRVIDLRAELKKRNLDTGGNKSVLMERLKKAVKEEGQDPDE................................................................................................................................................................................................................................................................... 73
8 -28.600sp|Q9UKV3|ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens GN=ACIN1 PE=1 SV=2  ali   36  67LDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLEN........................................................................................................................................................................................................................................................................ 110
9 -25.700sp|Q8IZQ8|MYCD_HUMAN Myocardin OS=Homo sapiens GN=MYOCD PE=1 SV=1  ali   30  69...PNLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGD................................................................................................................................................................................................................................................................ 117
10 -25.000sp|Q8IZQ8|MYCD_HUMAN Myocardin OS=Homo sapiens GN=MYOCD PE=1 SV=1  ali   30  220....NLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDI............................................................................................................................................................................................................................................................... 268
11 -23.800sp|Q15424|SAFB1_HUMAN Scaffold attachment factor B1 OS=Homo sapiens GN=SAFB PE=1 SV=4  ali   27  27.GTRRLSDLRVIDLRAELRKRNVDSSGNKSVLMERLKKAIEDEGGNPDE................................................................................................................................................................................................................................................................... 74
12 -23.500sp|Q9ULH7|MKL2_HUMAN MKL/myocardin-like protein 2 OS=Homo sapiens GN=MKL2 PE=1 SV=3  ali   34  237...SSLDDLKVSELKTELKLRGLPVSGTKPDLIERLKPYQEVNSSGLAAGGIVAVSSSAIVTSNPE.................................................................................................................................................................................................................................................. 299
13 -22.600sp|Q969V6|MKL1_HUMAN MKL/myocardin-like protein 1 OS=Homo sapiens GN=MKL1 PE=1 SV=1  ali   39  45...ANLDDMKVAELKQELKLRSLPVSGTKTELIERLRAYQDQISPVPGAPKAPAAT............................................................................................................................................................................................................................................................ 97
14 -19.900sp|O75928|PIAS2_HUMAN E3 SUMO-protein ligase PIAS2 OS=Homo sapiens GN=PIAS2 PE=1 SV=3  ali   27  1MADFEVSSFRVSELQVLLGFAGRNKSGRKHDLLMRALHLLKSG......................................................................................................................................................................................................................................................................... 48
15 -19.100sp|Q9Y6X2|PIAS3_HUMAN E3 SUMO-protein ligase PIAS3 OS=Homo sapiens GN=PIAS3 PE=1 SV=2  ali   25  1MAELGVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSSCAPSV.................................................................................................................................................................................................................................................................... 53
16 -19.000sp|O75925|PIAS1_HUMAN E3 SUMO-protein ligase PIAS1 OS=Homo sapiens GN=PIAS1 PE=1 SV=2  ali   28  1MADSAVMSLRVSELQVLLGYAGRNKHGRKHELLTKALHLLKA.......................................................................................................................................................................................................................................................................... 47
17 -16.800sp|P12956|XRCC6_HUMAN X-ray repair cross-complementing protein 6 OS=Homo sapiens GN=XRCC6 PE=1 SV=2  ali   23  118ISKGTLGKFTVPMLKEACRAYGLKSGLKKQELLEALTKHFQD.......................................................................................................................................................................................................................................................................... 159
18 -11.800sp|Q9Y2U8|MAN1_HUMAN Inner nuclear membrane protein Man1 OS=Homo sapiens GN=LEMD3 PE=1 SV=2  ali   15  1MAASAPQQLSDEELFSQLRRYGLSP-GTRPVYLKKLKKLREEEQQQHRSGGRGNKTRNSNNNNTAA.................................................................................................................................................................................................................................................. 73
19 -11.500sp|Q8IY92|SLX4_HUMAN Structure-specific endonuclease subunit SLX4 OS=Homo sapiens GN=SLX4 PE=1 SV=3  ali   12  215....QYSIMETPVLKKELDRFGVRPLP-KRQMVLKLKEIFQYTHQTLDSDSEDESQSSQPLLQAPHCQTLASQTYKPSRAGVHAQQEATT.......................................................................................................................................................................................................................... 299
20 -11.200sp|Q49AH0|CDNF_HUMAN(removed signalp:1-24) Cerebral dopamine neurotrophic factor OS=Homo sapiens GN=CDNF PE=1 SV=2  ali follow..  23  110LASVDLRKMRVAELKQILHSWGEECRAEKTDYVNLIQELAPKYAATHPKTE................................................................................................................................................................................................................................................................. 162
21 -10.800sp|Q9BXS6|NUSAP_HUMAN Nucleolar and spindle-associated protein 1 OS=Homo sapiens GN=NUSAP1 PE=1 SV=1  ali follow..  18  1MSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTSASSCDETE................................................................................................................................................................................................................................................... 68
22 -10.500sp|Q9UI08|EVL_HUMAN Ena/VASP-like protein OS=Homo sapiens GN=EVL PE=1 SV=2  ali follow..  23  375LDAFDLDRMKLEEVVRELHK-------VKEEIIDAIRQELSGISTT...................................................................................................................................................................................................................................................................... 416
23 -10.500sp|Q8N2W9|PIAS4_HUMAN E3 SUMO-protein ligase PIAS4 OS=Homo sapiens GN=PIAS4 PE=1 SV=1  ali follow..  28  12.....VMSFRVSDLQMLLGFVGRSKSGLKHELVTRALQLVQFD......................................................................................................................................................................................................................................................................... 49
24 -10.100sp|P41440|S19A1_HUMAN Folate transporter 1 OS=Homo sapiens GN=SLC19A1 PE=1 SV=3  ali follow..  7  402.....VNTFFATIVKTIITFIVSDVRGLGLPVRKQMLDGLRHCQRGHHPRQPPAQGLRSAAEEKAAQALSVQDKGLGGLQPAQSPPLSPEDSLGAVGPASLEQRQSDPYLAQAPAPQAAEFLSPVTTPSPCTLCSAQASGPEAADETCPQLAVHPPGVSKLGLQCLPSDGVQNVNQ.................................................................................................................................... 591
25 -10.100sp|Q6IQ49|CA055_HUMAN UPF0667 protein C1orf55 OS=Homo sapiens GN=C1orf55 PE=1 SV=1  ali follow..  28  392.SVAELELLGLEKLKCELMALGLKCGGTLQERAARL................................................................................................................................................................................................................................................................................ 426
26 -9.980sp|Q8N8S7|ENAH_HUMAN Protein enabled homolog OS=Homo sapiens GN=ENAH PE=1 SV=2  ali follow..  21  550TEGLDYDRLKLDEMRKELTK-------LKEELIDAIRQELSKSNTA...................................................................................................................................................................................................................................................................... 591
27 -9.910sp|Q86XL3|ANKL2_HUMAN(removed signalp:1-21) Ankyrin repeat and LEM domain-containing protein 2 OS=Homo sapiens GN=ANKLE2 PE=1 SV=4  ali   16  49...ARLKLLNPDDLREEIVKAGLKTSTTRFIFEKKLAQALLEQGGRLSSFYHHEAGVTALSQDPQRILKPAEGNPTDQAGFSEDRDF............................................................................................................................................................................................................................. 136
28 -9.880sp|Q9ULH7|MKL2_HUMAN MKL/myocardin-like protein 2 OS=Homo sapiens GN=MKL2 PE=1 SV=3  ali   37  87...SSLDDLKVSELKTELKLRGLPVSGTKPDLIERLKPYQEVNSSGLAAGGIVAVSS........................................................................................................................................................................................................................................................... 140
29 -9.840sp|P12956|XRCC6_HUMAN X-ray repair cross-complementing protein 6 OS=Homo sapiens GN=XRCC6 PE=1 SV=2  ali   27  268ISKGTLGKFTVPMLKEACRAYGLKSGLKKQELL................................................................................................................................................................................................................................................................................... 300
30 -9.740sp|Q9NS91|RAD18_HUMAN E3 ubiquitin-protein ligase RAD18 OS=Homo sapiens GN=RAD18 PE=1 SV=2  ali follow..  10  243LPKTVYNLLSDRDLKKKLKEHGLSIQGNKQQLIKRHQEFVHMYNAQCDALHPKSAAEKTRMRLEASKLNESVMVFTKDQTEKEIDEIHSKYRKKHKSEFQLLVDQARKGYKKIAGMSQKTVTITKEDESTEKLSSVCMGQEDNMTSVTNHFSQSKLDSPEELEPDREEDSSSCIDIQEVLSSSESDSCNSSSSDIIRDLLEEEEAWEASHKNDLQDTEISPRQNRRTRAAESAEIEPRNKRNRN................................................................ 495
31 -9.720sp|P55145|MANF_HUMAN(removed signalp:1-21) Mesencephalic astrocyte-derived neurotrophic factor OS=Homo sapiens GN=MANF PE=1 SV=2  ali follow..  16  103LSTVDLKKLRVKELKKILDDWGETCKGEKSDYIRKINELMPKYAPKAASARTD............................................................................................................................................................................................................................................................... 157
32 -9.710sp|P50552|VASP_HUMAN Vasodilator-stimulated phosphoprotein OS=Homo sapiens GN=VASP PE=1 SV=3  ali follow..  21  340.DYSDLQRVKLEEVKKELQK-------VKEEIIEAFVQELRKRGSP...................................................................................................................................................................................................................................................................... 380
33 -9.640sp|Q9Y2E4|DIP2C_HUMAN Disco-interacting protein 2 homolog C OS=Homo sapiens GN=DIP2C PE=2 SV=2  ali   16  1MADLEGMALRLAELELELSEGDITQKGKRSKLIGAYLPQPPRVDQALPQERRAPVTPSSAS....................................................................................................................................................................................................................................................... 72
34 -9.640sp|Q9BZD3|GRL1B_HUMAN Protein GRINL1B OS=Homo sapiens GN=GRINL1B PE=5 SV=2  ali follow..  23  15....DLAQRSLVELREMLKLQKLPDKGKKFDSFAKLKAAIAECEEVRRKNE................................................................................................................................................................................................................................................................. 73
35 -9.630sp|A4IF30|S35F4_HUMAN Solute carrier family 35 member F4 OS=Homo sapiens GN=SLC35F4 PE=2 SV=2  ali follow..  11  1.....MDEL-LLDLFHKLSGRQLA--AGNG-----LCGISHKEQEVWKPGHNILVKMRKEDKSLVWLIHSTLARYTQVTNFLGTSRSSVTRCKPGANCPSSHSGISRQLSPLSVTEDSSAPILELQNQGSSGVCGHRVERQNRSADDGTQTHSENSSQENRIKARCLSCTSMVLK..................................................................................................................................... 163
36 -9.570sp|P42166|LAP2A_HUMAN Lamina-associated polypeptide 2, isoform alpha OS=Homo sapiens GN=TMPO PE=1 SV=2  ali   18  110...LDVTELTNEDLLDQLVKYGVNP-GTRKLYEKKLLKLREQGTESRSSTPLPTISSSAEN....................................................................................................................................................................................................................................................... 171
37 -9.350sp|Q68G75|LEMD1_HUMAN LEM domain-containing protein 1 OS=Homo sapiens GN=LEMD1 PE=2 SV=2  ali follow..  14  1..MVDVKCLSDCKLQNQLEKLGFSLPSTRKLYEKKLVQLLVSPPCAPPVMNGPRELDGAQDSDDSEELNIILQGNIILSTEKSKKLKKWPEASTTKRKA................................................................................................................................................................................................................. 101
38 -9.290sp|Q2VYF4|LETM2_HUMAN LETM1 domain-containing protein LETM2, mitochondrial OS=Homo sapiens GN=LETM2 PE=2 SV=2  ali follow..  13  330IAKEGVTALSVSELQAACRARGMRSLGTEEQLRQQLTEWQDLHLKENVPPSIDVKPKPIEIPLSGEAPKTDILVELPTFTESKENMVDLAPQLKGTKDEDFIQPPPVTSSPITPSTPISLPKGPITSSEEPTLQAKSQMTAQNSKASSKGA............................................................................................................................................................. 491
39 -9.050sp|Q96KQ4|ASPP1_HUMAN Apoptosis-stimulating of p53 protein 1 OS=Homo sapiens GN=PPP1R13B PE=1 SV=3  ali   25  1MEVAMMDK-RISELRERLYGK-------KIQL.................................................................................................................................................................................................................................................................................... 24
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 4   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Flexible structure alignment by chaining aligned fragment pairs allowing twists. Bioinformatics. 2003 Oct;19 Suppl 2:II246-II255.