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Query: [J] KOG4600 Mitochondrial ribosomal protein MRP7 (L2), from COG1018

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAMATSMSLNLIGAFKGLSLSSTSSFLRGDLSFSPKTSFTVTLPLENLQAPIPLTIESAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTKFHAGKNVGIGKDHTIFSLIDGLVKFEKFGPDRKKISVYPREIVPENPNSYRARKRENFRLQREKKKARRENYSYTLPTPELVLASASVDDAEANPECLast
1 -53.400sp|Q9P0M9|RM27_HUMAN(removed signalp:1-25) 39S ribosomal protein L27, mitochondrial OS=Homo sapiens GN=MRPL27 PE=1 SV=1  ali follow..  25  1.....................................................LAVRYASKKSGGSSKNGGKSSGRRQGIKKMEGHYVHAGNIIATQRHFRWHPGAHVGVGKNKCLYALEEGIVRYTKEVYVPHPRNTEAVDLITRLPKG-AVLYKTFVHVVPAKPEGTFKLVAML...................... 123
2 -9.030sp|Q8WWZ7|ABCA5_HUMAN ATP-binding cassette sub-family A member 5 OS=Homo sapiens GN=ABCA5 PE=2 SV=2  ali   22  240.....................................................IMVSNLHKEYDDKKDFLLSRKVKKVATKYIS---VKKGEIL----------GPN-GAGKS-TIINILVGDI.......................................................................... 300
3 -8.930sp|Q9Y3B2|EXOS1_HUMAN 3`-5` exoribonuclease CSL4 homolog OS=Homo sapiens GN=EXOSC1 PE=1 SV=1  ali follow..  12  4...................................................................................PVRYCIPGERLCNLE--EGSPGSGTYT-RHGYIFSSLAGCLMKSSENGALPVVSVVRETESQLLPDVGAIVTCKVSSINSR.................................. 81
4 -8.540sp|Q8IUA7|ABCA9_HUMAN ATP-binding cassette sub-family A member 9 OS=Homo sapiens GN=ABCA9 PE=1 SV=1  ali   25  232....................................................VIIASCLRKEYAGKKKNCFSKRKKKIATRNVS---VKKGEVI----------GHN-GAGKS-TTIKMITGDTKPTA...................................................................... 297
5 -8.140sp|P11498|PYC_HUMAN Pyruvate carboxylase, mitochondrial OS=Homo sapiens GN=PC PE=1 SV=2  ali   15  202..........................................................PKALKDVKGQIGAPMPGKVIDIKVVAGAKVAKGQPLCVLSAMKM----------ETVVTSPMEGTVR......................................................................... 258
6 -8.090sp|P05165|PCCA_HUMAN Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Homo sapiens GN=PCCA PE=1 SV=4  ali   17  202..........................................................EKVTEDTSSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAMKM----------QNSMTAGKTGTVK......................................................................... 258
7 -8.040sp|Q96RQ3|MCCA_HUMAN Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Homo sapiens GN=MCCC1 PE=1 SV=3  ali   22  189..........................................................SVSSQETQGGPLAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMKM----------EHTIKSPKDGTVK......................................................................... 245
8 -7.990sp|Q8N139|ABCA6_HUMAN ATP-binding cassette sub-family A member 6 OS=Homo sapiens GN=ABCA6 PE=1 SV=2  ali   20  226....................................................VIIASCLHKEYAGQKKSCFSKRKKKIAARNIS---VQEGEIL----------GPN-GAGKSSSIRMITAGEVELK....................................................................... 297
9 -7.910sp|Q13085|ACACA_HUMAN Acetyl-CoA carboxylase 1 OS=Homo sapiens GN=ACACA PE=1 SV=2  ali   12  144..........................................................VFEKENDPSVMRSPSAGKLIQYIVEDGGHVFAGQCYAEIEVMKM----------VMTLTAVESGCIH......................................................................... 200
10 -7.750sp|Q6UX71|PXDC2_HUMAN(removed signalp:1-30) Plexin domain-containing protein 2 OS=Homo sapiens GN=PLXDC2 PE=1 SV=1  ali follow..  10  352.NTEPVETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLPTEDDTKIALHLKDNGASTDDSAAEKKGGTLHAGLIIGIYMYHHPTSAASIFFIERRPSRW-PAMKFRRGSGHPAYAEVEGFIVSEQ...................................................................... 498
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Harder T, Kolodny R, Sitbon E, Li Z, Godzik A. Using an alignment of fragment strings for comparing protein structures. Bioinformatics. 2007 Jan 15;23(2):e219-24.