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Query: [S] COG0398 Uncharacterized conserved protein, from COG1018

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MMKMQSRKIWYYRITLIILLFAMLLAWALLPGVHEFINRSVAAFAAVDQQGIERFIQSYGALAAVVSFLLMILQAIAAPLPAFLITFANASLFGAFWGGSLSWTSSMAGAALCFFIARVMGREVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPFDPISYAAGLTSIRFRSFFIATGLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTVVIFMAKKIWLERQKRNALast
1 -4.300PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;  ali follow..  12  30......................................................................................................IVAILMPMILVVSFGNCFGKFAIVKKV-NDGFNIGSGLLAKFIKTLVMYFPFSILYFVGFFFDLILFNLIEFWS-------GNNP................................................ 109
2 -4.290PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]  ali follow..  11  1..........................................................................ASYISVPRDLTKVKSKVMFNTKRQLICFGMAVLIGVPSFFLMKTVMKTNTA---------------------VMGMMVIMMPFFFLAMYEK----NGQPLEVILEHMI..................................................... 84
3 -3.860PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;  ali follow..  12  133...................................WIRETELKESFVPTDSISQAIHFFSDTHASYFMIIFALFVGVYLFRAFRRKQLQLVYFNDIDSVYPLFLCLLMASATVYESMQVFVPDTWEHFYFNPTLSPFKVPFILSVFLLSIWLFLIVALAAAAVFYLLGLMSSCIFCYFFFILM-------THIYIGYLF.................................... 301
4 -3.670PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;  ali follow..  10  88.....................................................TYFPILGSAAMYQAFMIGNISNK---VPAAIVAQSIGAKAGSKRGDLAAVMAAATMHLLSLLIFVGFLGTWLVSLVPVEVIEVARLY-------------IMPSL---LVQAIVSMRNVRATVVALGLAV-------VIQLLVVPAFPQLGMFATAVVVISSIIINWVVRDRRGQVTIQSEA 252
5 -3.620PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]  ali follow..  15  111................................................................................PVQIKLAPVNAPY--FDGAKLLIAADCTAYAYASFHEKFIKGHVT-KLDSVDYSEKLTEIIRRNDIQSVTIVRMVP--------CCGGLEMA-AKKALQDSGKFIPWQVATISIDGRIL.................................... 223
6 -3.470PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;  ali follow..  14  16.................................................KGAGNPLEFKGLKSQYLFIFAGGLVAVLLVVVILYIAGVNQWI------IPFGLLSGSLLVWLTFRLNARYGEHGLMKLLSGKRHPRY.................................................................................................. 98
7 -3.200PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821;  ali follow..  11  67................................................................................PKYIARRGDGQVV--LSRLLHLVASSVDGSRDIETIAHRVSGRFGREVSADNVRYLIEQKLDPLGVTLLALKGHRVIFNERRVATIAGALAWLHRPVVVLAVLAGIAVLDVWLFAFFGAITPVLEVL............................ 209
8 -3.070PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]  ali follow..  11  6...................................................................................................................LTYLLEHP---DKITSEETTQLRTVVEE-----------FPFFQAARALHLKGLDSFLYNTYLKKTAAHTQDRTVLFDFITSE..................................... 77
9 -2.840HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636;  ali follow..  10  9.................................................................LIVMLVVVLAITCLMATTAFAAGTGDVAGAVESTIKSVVDNVVFPAIDLILAVFFFAKLGTAYFEYRKSGQFEWAAPAILFACLVFTLTAPMYLWSIIGI...................................................................... 115
10 -2.750PB053359 gi|153891307|ref|ZP_02012332.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]gi|151582630|gb|EDN46158.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]  ali follow..  15  17..........................................................................................YRCGAFQLLAQMALRRELPEGVAPAQVRGALTAVIRRTLGAPGTFDNDTGNDGAGWLRIGLAGHQPGLGEVYIS--TGSLYLCTTAFLPLGL..................................................... 106
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.