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Query: [C] COG1038 Pyruvate carboxylase, from COG1018

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MVLLLYSAVQQNSVLACGETVLKISKILVANRSEIAIRVFRAANELGIKTVAIWAEEDKLSLHRFKADESYQVGRGPHLAKDMGPIESYLSIEEVIRVAKLSGADAIHPGYGLLSESPEFVEACNKAGITFIGPTPDTMRQLGNKVAARNLAISVDVPVVPATNPLPDDIAEVERMAEEIGYPVMLKASWGGGGRGMRAIRKKEDLAREVTEAKREAKAAFGKDEVYLEKLVERARHVESQILGDTHGNVVHLFERDCSIQRRNQKVVERAPAPYLSEAQRQELAAYSLKIAAATNYIGAGTVEYLMDADTGKFYFIEVNPRIQVEHTVTEVVTGIDIVKAQIHILEGAAIGTAESGVPKQEDIRLNGHALQCRITTEDPEHNFIPDYGRITAYRSASGFGIRLDGGTSYTGAVITRYYDPLLVKVTAWAPEPDEAISRMDRALREFRIRGVATNLTFLEAIIGHDSFRNNTYTTRFIDSTPELFAQVKRQDRATKLLTYLADVTVNGHPETKGRAKPADKAAKPIVPYIDAPTPDGTKQLLDKLGPKGFADWMRNEKRVLVTDTTMRDGHQSLLATRVRTHDIARVASVYSKALPQLLSLECWGGATFDVSMRFLTEDPWERLSLIREGAPNLLLQMLLRGANGVGYKNYPDNVVKYFVRQAARGGVDLFRVFDCLNWVENMRVSMDAIAEENKLCEATICYTGDLLNSARPKYDLKYYTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREATGLPIHFHTHDTSGISAATVLAAVDAGVDAVDAAMDAFSGNTSQPCLGSIVEALSGSERDTGLDTEWIRRISFYWEAVRNQYAAFESDLKGPASEVYLHEMPGGQFTNLKEQARSLGLESRWHEVAQAYADANRMFGDIVKVTPSSKVVGDMALMMVSQDLTVADVENPDREVSFPDSVVSMLKGDLGQSPGGWPEALQKKALKGEKPYTVRPGSLLEDADLDAERKVIETKLERKVDDFEFASYLMYPKVFTDFALTAETYGPVSVLPTHAYFYGMEDGEELFADIERGKTLVIVNQASSGIDDKGMVTVFFEINGQPRRIKVPDRAHGASGSAVRRKAEPGNASHIGAPMPGVISRVFINQGQEVKAGDVLLSIEAMKMETALHAERDGKIAEVLVKPGDQIDAKDLLISYAELast
1 -1.630PB008434 gi|121582878|ref|YP_973320.1| hypothetical protein Pnap_4296 [Polaromonas naphthalenivorans CJ2]gi|120596140|gb|ABM39578.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2]  ali follow..  17................................................KAILVYGVAKRNLYDPDQSLAITHATINDVEMKSGAPVGRLMTQSDLNELVTGLSQSQSLSVPSWIDTTMLALG--AGRMIWYTPACQRAMFFKTSSFTKDTFEAQGQLP-----------------------TPGLVWLVMQGA-KGSGRPDKETKLYQAFFNVWSQGKVCTGNAAMPVGDNAAIPHMWVDAFFGSNFTHPNFKEKDRLVKGVCPIDFWKA-----------------------------------MTEKPLPVFRLVDLPLTVALAPDLNQKLGNID--------AAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 263
2 -1.570PB060121 Q64SA7_BACFR/1-251 PB060121; Pfam-B_60121;  ali follow..  12  1.........................................................................................................................................................................MKKEQFEFNELPYPTLARF-------GL----TQEMIEDLPLCILKEIGKGGYSPVLPMRVTNENGEVIESR------SRFAFIRMDSGEVDVVFYPTLKSSPLECYNEEQQKQLLDGK-SIIADVAMADGRRSKAFVDEETKQVMYVPTP---IIARNLKVLAEVMHLGTVEVNMQHGEPLTVAVDGEPVTVGIDLH....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 180
3 -1.480HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508;  ali follow..  10  1......................................................................................................................................................................MKNIYNTLGMTKACLCALAVSLVTTGCSDLLDKEPPSAISDGSFWTGEGDAMLALTGCYRFQTGWSHDDFATPQGLLYLTNSNLRWYWGNAYTQIAKYNTFLENITDCPMEESKKEQWSAEV-KCLRAYFFLNLTDVPMPLKTSVDEANSISQTPQTEVSQVEKDLKTAIDLLPVHYLRGIWRL........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 213
4 -1.460PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821;  ali follow..  14  1...............................................................................................................................................................................................................................................MTLLGDK------------TASPYDTGTPVPGPGAGLERPVVPRLSAG-LKLHGEYQGSGFTEPKYIARRGDGQVVQLS-----RLLHLVASSVDGIETIAHRVSGRFGREVSADNVRYLIEQKLDPLG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 130
5 -1.370PB012771 _Gut.Meta.Jp.0094636_ gi|162817068|dbj|BABA01027641.1||1 (+ 249:636~0 complete)  ali follow..  10  16..................................................................................................................................................................................................NGIHYTLVGDYYFPTCMLGDKSPNGKWASLYE---RYLQEKHPHEYVRLIWADELAALLESVQRECEEREAVLVREM--------------------------EAEGVNEEMKGNEQMAWVQRMEMICGRVEEVVCEEI......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 126
6 -1.300PB021443 Q5LG43_BACFN/1-226 PB021443; Pfam-B_21443;  ali follow..  10  21..................................................................................................................AQKNLFNKYNDMKGVSSVYISKAMMELNPYIGKVAEHLNSVQVLSTHDNKVREEMAKDIRSLVQSSKYELLMKQKSTVSGSEVYVNRKGSKVKELIMVMNGASSLKF------------------VYMEGDMTTDDIKKLMLYQSTSQNFIISGDLFYANNKPVTYFKKGNSDNQK--------DMAELSGTYNLNSIDTNYKEEL------STLNDKLKRIDQGLKNMNI............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 226
7 -1.260PB177066 Q891G9_CLOTE/1-159 PB177066; Pfam-B_177066;  ali follow..  11  11...............................................................................................................................................................................................................................................................................................................LLMNDTQKNDLFYIEFIGR-NRRSIIVQKL-GKKELIRQLDIAE---------------------HCLSFEQVSDEIIEYFNIQEGDFHT--------VESCKYNVPSVQAIGKVYHRLIISIISEQDNLVDVLFEVFNSFISDEISDFNSSVYYSNPEYLKYSYLEGRL............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 158
8 -1.220PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621;  ali follow..  25  36.........................................................................................................................................................................................................................AASFTDTVVYFT---------DIQILDSAKSKEGFLTHRD-SYQLKNNGLQQNSTCMIYFSENRKKLEKEATKILSKYKRNRNTTVTRI---DTDKFHFIKPE...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 132
9 -1.140HGC00921 gi|162841401|dbj|BABA01003308.1|3.0 TMP01242;  ali follow..  12  4....................................................................................................................................................................................................RLLPNTDQARIRALKTAVVKGDMCDVYDLPVSLKTLG-----EARIFLSKFETAHSYYVHCYGEQSRNSK------------KHQANVKTARLYISHFIQVLNLAVIRMEIKESHKALYGLPVD-----NFSVPDLSSEASLAEWGQKIIEGE-----------RKRTSQGGIPI------------YNPTIAKVKVHYDIFMEGYEKQKSLQSL-ASMRVQADRLILDIWNQVEAKFQDVSPNEKRLEKCRDYGLSIHIPFFWKSLQKITFRYGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 262
10 -1.100HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;  ali follow..  11  20................................................................................................................................................QEKAWQVIKNTNI----------------IQIWEDAGAKINLVGSLRTG--DFHIYSSPLNLTDSFQAMARLAENPSIKRIECANLLHTAEACIEWHAWYQNEEN-MIHIREGSRYDGYFEKVAQRISE-IMTDEIRETILRLKYETPETEKIIGVEYYQAVIRDG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 179

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Lukasz Jaroszewski, Zhanwen Li, S. Sri Krishna, Constantina Bakolitsa, John Wooley, Ashley M. Deacon, Ian A. Wilson, Adam Godzik, Exploration of Uncharted Regions of the Protein Universe. Plos Biology. 2009 Sep. 7(9):e1000205