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Query: [S] COG2510 Predicted membrane protein, from COG1018

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MMMASWQFWALMSAVFAALTAIFAKVGIQGINSDFATLVRTFVIIGALCLFLTVTGQWQKPGEISARSWLFLVLSGLATGASWLAYFRALQIGDASRVAPIDKLSVVLVALFGAAFLGERMSTINWIGILLIGCGVVLVALRVLast
1 -4.690PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205;  ali follow..  7  24......................................................................................QYEIMGYRLPRAVTWRALGYFAAVEAGLVAFRFLPPFKWIFGDMIDQVWLMYYGV.. 78
2 -4.440PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]  ali follow..  6  26.......................................................................LICFGMAVLIGVPSFFLMKTVMKTNTAVMGMMVIMMPFFFLAMY---NGQPLEVILEHMI............ 84
3 -4.330PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708;  ali follow..  8  1..MNEGI-----------------EQLIRRLSDASRLVPLALLAVVAAVIYVWRPLFHGLIYRVAYSPSLLILVGTTVVAGIALVFWPRMGEDPLESATKWSILGTIVVAALVLSVA.......................... 100
4 -4.170PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;  ali follow..  16  22..............................................................................................TSISGLLISCVMLLIGILSFASTFELEDKSSTVSMALMVFGTGLFLLGI 70
5 -3.490PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;  ali follow..  8  161......ASYFMIIFALFVGVYLFRAFRRKQLQLVYFNDIDSVYPLFLCLLMAFSATVYESMQVFVPDTWE------------HFYFNPTLSPFKVPFILSVFLLSIWLFLIVALAVLDDLFRQLTPAAAVFYLLGLMSSCI.. 283
6 -2.830PB028090 gi|167758043|ref|ZP_02430170.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]gi|167663940|gb|EDS08070.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]  ali follow..  12  4.............................................................................................QIYGENAGWQLLGWLLVFAGLILANELARRTKVGGIFCFLIVPAALT... 50
7 -2.790PB000520 Q9RVX4_DEIRA/1-194 PB000520; Pfam-B_520;  ali follow..  15  107....................................................................................FLMRALQAFYTSVALLVLTSILLGLDGLFDVNTGSLPLLVALGGSVSLAYGALLLSYEA 165
8 -2.670PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF  ali follow..  13  1............................................................................................STQTSASVLNLINP----IESQTILKDA-AATALYGS--GANGVVLITTK. 46
9 -2.250PB071107 _Gut.Meta.Jp.0066071_ gi|162701604|dbj|BAAY01026246.1||2 (+ 344:749~0 complete)  ali follow..  16  29..............................................................................................................VVRIFPLTEEIENVEWLP------GAIVLL... 52
10 -2.240PB053244 _HOMD.0087087_ pint_c_2_2642 Prevotella intermedia 17 [158005 - 157583] (REVERSE SENSE) ORF  ali follow..  41  6..............................................................................................................................IGGLLMAVGTGLYAFFI 22
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang Y, Stec B, Godzik A. Between order and disorder in protein structures: analysis of "dual personality" fragments in proteins. Structure. 2007 Sep;15(9):1141-7.