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Query: [P] COG3067 Na+/H+ antiporter, from COG1018

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEISWGRAMWRNFLGQSPDWYKLALLVFLIVNPFIFLANPFIAGWLLVAEFIFTLAMALKCYPLLPGGLLAIEAVIIGMTSAAHVREEVAANLEVLLLLMFMVAGIYFMKQLLLFIFTRLLLSIRSKMVLSLAFCVAAAFLSAFLDALTVVAVVISVAVGFYGIYHRVASSRGEENDMLDDSHIDPHYKTVLEQFRGFLRSLMMHAGVGTALGGVMTMVGEPQNLIIAKAAGWHFGDFFLRMSPVTVPVLVCGLLTCMLVEKMRWFGYGETLPEKVRDVLQQFDDQSRKKRTRQDKIKLIVQAIIGVWLVTALALHLAEVGLIGLSVIILATALTGVTDEHAIGKAFTESLPFTALLTVFFSIVAVIIDQHLFAPIIQFVLQASEHAQLTLFYLFNGLLSSISDNVFVGTIYINEAKAAMENGAISLKQFELLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGRMVWMALPYTIVLTLIGLLCVEFTLAPATEWMTQAGWLATLSLast
1 -4.360PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]  ali follow..  8  5...............SVPR-VKSKVMFNLTKRQLICFGMAVLIGVPSFFLMKTVMKTNTAV---MGMMVIMMPFFFLAMYEKNGQ............................................................................................................................................................................................................................................................................................................................................................................................................................................. 74
2 -3.490HGC00857 gi|162620543|dbj|BAAW01002606.1|2.0 TMP01139;  ali follow..  13  1.........MLNFHSKKVMCIQQEIYARMIMYNFVQMI............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 29
3 -2.720PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708;  ali follow..  10  1MNEGIPEQLIRRL-SDASRLVPLALLAVVAA--VIYVWRPLFHGLIYRVAYSPSLLIL-----VGTTVVAGIALVFWPRMGEDPLESAVTKWSILGTIVVAALVLSVAYSIPAGMAEERSLAQDATADAEAVTDFPTVNEENPRIVPEAVANVQTKGSVSYRQHELGASDIARTEDG--RLAWSYPIQPGFQVRLSGHQRGVLLSDMTAMEDREMQAFDEHE.................................................................................................................................................................................................................................................................................................... 213
4 -1.660PB011130 gi|88806557|ref|ZP_01122074.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]gi|88783389|gb|EAR14561.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]  ali follow..  15  27.....................................................................................................................................................................YLEAVKRSFAGTAGSDEIIADIEARIAELFYEKMEN---QVITQKEVDAVIAIMGQPEDY................................................................................................................................................................................................................................................................................................. 85
5 -1.440PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205;  ali follow..  10  79IPLFLVWGADKYKTGKSLFSFVRSWITFRL.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 109
6 -1.400HGC00878 gi|162869432|dbj|BABB01000575.1|7.0 TMP01167;  ali follow..  16  1....MANYATNIFHARTEN--LDKIEDFLDDT---FSEFTNRYGDSVDAEFSSRWVYPEEEIKKLVESLEDKDKVYIKILTYEFEDEYVSFRI..................................................................................................................................................................................................................................................................................................................................................................................................................................... 87
7 -1.180PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;  ali follow..  7  14.............................................................................................................................................................................................................................................................................ETPAENITEPSKDGRKCPKWLLPLVAAVCAVILVVAGIIGWNAYSGAKLAEAKEACVTAADTVRNNANEYNALLNGDAADA--------VKAEQVKDSKTVESLGKELKASAPEYEGCVAENAQGLDAAAVKLNEQADWYETHEKSLSKAVRAVVESKAAKRLDDAKTNLTAKLDEASKLLADSDGKVA........................................................ 196
8 -1.060PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;  ali follow..  9  27.............................LKSQYLFIFAGGLVAVLLVVVILYIAGVNQWICIPFGLLSGSLLVWLTFRLNAR............................................................................................................................................................................................................................................................................................................................................................................................................................................... 80
9 -1.010HGC00422 gi|163631722|dbj|BABG01004545.1|2.0 TMP00397;  ali follow..  9  3MNATDWNTALFEKMSDEQDKFRDWLKS--------------------ILHHTYEYTVREDI----------VMAMEQLELTDAQAQALLDSTPLADVYRYFEKLETGHMDVIRDSIENRADDVCRAKEELRTTPIYPHSAAYAREHGELEQYRASN-----VNRQCKESIEAAVREHFDGMYLSHDAAKGVIETYGMERVSMVLSNTVQLQ-GRYSRRNKEWAKTIPNDNPETVRCGYALNSHPAVLDGFIDLVREEQQRSRTQREKLEPSRPSVRDKLKQELPAHKSAAPKKRE........................................................................................................................................................................................................................... 271
10 -0.966PB001232 gi|126647001|ref|ZP_01719511.1| hypothetical protein ALPR1_19713 [Algoriphagus sp. PR1]gi|126577049|gb|EAZ81297.1| hypothetical protein ALPR1_19713 [Algoriphagus sp. PR1]  ali follow..  7  2IQTSFYQEKINEII--SPAYYRFTYEGTFFDQKIKVT-ERVFEGYIYIIEDLWAIHLKTSLLGFQIQATQQYAPVAENVWMPLTHTYRXXXXXXXXXXXXXYLASTRDYE.................................................................................................................................................................................................................................................................................................................................................................................................................... 127
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang Y, Stec B, Godzik A. Between order and disorder in protein structures: analysis of "dual personality" fragments in proteins. Structure. 2007 Sep;15(9):1141-7.