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Query: [S] COG3610 Uncharacterized conserved protein, from COG1018

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MDLVWTIIIQLVLSYVATVTFAIITNVPKRALNACGITGTFGWMAYWTLMQMDSGTGASSLAGAFVVAILSHFFAKHKKMPITIFNVPGIVPLVPGGLAYQAVRNFVLGDYTEAIGFSVQVTVVAGAIAAGLMLSEVFNHSIRAFRGRKERILast
1 -7.790PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]  ali follow..  13  10...............LTKVKSKVMFNLTKRQLICFGMAVLIGVPSFFLMKTVMKTNTAVMGMMVIMMPFFFLAMYEKNGQPLEVILEHMIQAIFPKIRPYVT.................................................. 98
2 -3.900PB011051 Q8A0P0_BACTN/1-227 PB011051; Pfam-B_11051;  ali follow..  18  1..................................................................................................................MKTVFNIVLVLCAAALIYICYSSIMGPINFEKAKKER. 37
3 -3.460PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708;  ali follow..  11  16.....................................................ASRLVPLALLAVVAAVIYVWRPLFHGLIYRVAYSPSLLILVGTTVVAGIALVFWPRMGEDPLESAVTKWSILGTIVVAALVLSVAYSIPAGMAEERSLA 114
4 -3.070PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;  ali follow..  12  139...................................................IGGAATMHLLSLLIFVGFLGTWLVSLVPVEVIEVARLYIMPSLMGAVLVQAIVSVVIQLLVVPAFPQLGMFATAVVVISSIIINWVVRDRRGQVTIQSE.. 251
5 -3.060PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;  ali follow..  9  1............................................................................MKTKFIYVVLMALFLGSQMTLSAQNEENKERKQRPTPEQMMQMQTNQMVRALMLDDATAAKFTPIYEKYLKELREC 76
6 -2.960PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]  ali follow..  8  263...............................................................SLMTETLARVYVEQKNFSKAKQAYRILSLKYPEKSGFRAIEKLQEN........................................... 313
7 -2.940HGC00150 gi|162733542|dbj|BAAZ01030454.1|1.0 TMP01074;  ali follow..  11  1.................................................................LLGITNVPDKKNYAIDELGLSAQAARNLYAGKANAQVVNYLLESPRFLDLTYILE-QYFNDTVAAGYAAQNQLYTTISSLTRKTVK. 85
8 -2.930HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  10  10................................................................VWLLGAAFMVGCGKQVPENIIQPDRMENILYDYHLSISMGNNLSYSDNYQKEAYKNYVFEKHHIT---ELASLYKKLGERFRSEKKHM 110
9 -2.870PB009534 gi|153852721|ref|ZP_01994158.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]gi|149754363|gb|EDM64294.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]  ali follow..  9  60.................................................................................SVLKVIQKIHEIYPEASVEDFIVTYEEQDGKGGVIHVAKIVMVVMISFFGAAFSTMAFNNDVGVTKMFGQI 135
10 -2.720PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;  ali follow..  6  1....................MTLIKGEPGKGIVLKEYGKNIQKIVDWILT---EDREQRTRYANTCVELMRQLNPGVRDTEEHTTKLWDHLFIMSNFKLVDTPYPMPDIAVLGRKPERVPYNHNKLKYKYGKNINLLIEQAILKEDGAEKE. 131
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.