current user: public
If you have questions about the server, please let us know.

Query: [G] KOG1581 UDP-galactose transporter related protein, from COG1018

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340
# Score Template Links and tools%idFirst MAEPELVNGGVKENKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKEFFKHSLFLVFCNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGVSLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQGHLLPAVDFVSLHRDCLLDIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLSWEQCIGSVIVFGSLYAKNLLNNKKNSQTQPPPPELPQYEKVESSLast
1 -3.900PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;  ali follow..  11  18.....................................................................................................................................IAKRTSISGLLISCVMLLIGILSFAST-FELEDKSSTVSMALMVFGTGLFLLGIF............................................................................................................................................................ 71
2 -3.360PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]  ali follow..  7  22.....................................................................................................................................................................................................................................................TKRQLICFGMAVLIGVPSFFLMKTVMKTNTAVMGMMVIMMPFFFLAMY---NGQPLEVILEHMIIFQRPKIRPYVTDNYYAALLRQAKAEKEVEEIVRL 121
3 -3.310PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;  ali follow..  8  2........................................................................................................................................KTKFIYVVLMALFLGSQMTLSAQNEENKERKQRPTPEQMMQMQTNQMVRALMLDDATAAKFTPIYEKYLKELREC------------------RMMNFKPRARKDAAQGTEANTAKETPKPVMTDAEIAKMLKDQFAQSRKMLDIREKYYNEFSKIL---SQKQIMKIYQQEKSNMNKFRKEFDRRKGQKPGQGHKPGQDRQRQRQHT 188
4 -3.310PB069407 _HOMD.0084606_ pint_c_2_12 Prevotella intermedia 17 [3585 - 4295] ORF  ali follow..  7  120.............................................................................................AVKSLCYFVMVVLLITVLVLSFKLIARFRN-------ENIFLMRNLKLIRIMAFSILAYYIISFSLAGQPIDIAGSLDFPNGLFEIPFIFIIYEIFAIGVRMREEN................................................................................................................................................. 233
5 -2.470PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708;  ali follow..  8  1...............................................................................................................................................................................................MNEGIPEQLIRRLSDAS---RLVPLALLAVVAAVIYVWRPLFHGLIYRVAYSPSLLILVGTTVVAGIALVFWPRMGEDPLESAVTKWSILGTIVVAALVLSVAYSIPAGMAEERSLAQDATADAEAVTDFPTVNEENPRIVPEAVANVQTKGS 150
6 -2.330PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;  ali follow..  10  1................................................................................................................................................................................................MHNFKEKIFSKIRSRSCPFMQQNKFRKAIVAILMPM---------------------ILVVSFGNCFGKFAIVKKVYEVNDGFNIGSGLLAKFIKTLVMYFPF--ILYFVGFFFDLILFNLIEFWSGNNPVGYNEYDENGKYVKAYEENGEK 131
7 -2.260PB015266 gi|154494998|ref|ZP_02034003.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]gi|154085548|gb|EDN84593.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]  ali follow..  8  1.........................................................................................................................................................................................................................................................................................MKRIVSMMVIFTL--------------LLGGMTHVQAQTSKAAXXXXXXXXXXXXXXXRLAKD 49
8 -2.150PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205;  ali follow..  7  25.........................................................................................................YEIMGYRLPRAVTWRALGYFAAVEAGLVAFRFLPPFKWIFGDMIDQVWLMYYGV------------------LFLVWGADKYKTDG......................................................................................................................................................... 94
9 -1.920PB053244 _HOMD.0087087_ pint_c_2_2642 Prevotella intermedia 17 [158005 - 157583] (REVERSE SENSE) ORF  ali follow..  10  1...................................................................................................................SIVYAIGGLL--MAVGTGLY---FFIIQDVACIVMLIGAICFATMQMRQQYLGTNLT-KIMVLADIGFILAGLF........................................................................................................................................................... 74
10 -1.910HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;  ali follow..  9  32............................................................................................................................................................................................................................................................................GYFENLTSEVMGKLGPAFEEVKQPMMWIRMKPLLYMAAMFIGAALIIRVASSNHQPTTAGDHLTANEAATEVVSDE 111
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 3 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.