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Query: [O] KOG2016 NEDD8-activating complex, APP-BP1/UBA5 component, from COG1018

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAQLGKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGILKNENGAPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQLLast
1 -2.980HGC00921 gi|162841401|dbj|BABA01003308.1|3.0 TMP01242;  ali follow..  11  107LPVDNFSVPDLSSEASLAEWGQEGERKRTSQ----------GGIPIYNPTIAKVKHYDIFMEGYEKQKSLQSLTNRSLEQLASMRVQA--RLILDIWNQVEAKFQDVSPN---EKRLEKCRDYGLIIIIGPEKNRIRRFFKICLSIHIPIFFWKSL.......................................................................................................................................................................................................................................................................................................................................................................................... 252
2 -2.790PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;  ali follow..  11  7LEAMEYEINKG-AGNPLEFKGLKSQ------YLFIFAGGLVAVLLV--LYIAGVNQWICIPFGLLSGSLLVWLTFRLNARYGEHKLLSGKRHPRYL...................................................................................................................................................................................................................................................................................................................................................................................................................................................... 99
3 -2.690PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;  ali follow..  163...........................ITTFSIAMAYQQNGG-----DPFVEGLEALETLDRVLISEACNHNRITSACNDIGMVQIP---NKLEAALGGKKLQIEHAFGREFPELESGGMDGLKLAIGCMIDAQKMQQRMKDLHEAGVPVT-------YGVFFSWAAWPDALRR........................................................................................................................................................................................................................................................................................................................................................................ 303
4 -2.540HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907;  ali follow..  12  9.RGARAPLGRGRGAASGALSDERGAGTVLVVGVIAV--------LAAALGVSGLIQAQAAAGRSRAAADLAA-----SSIVAPGDPCEAASRVARAN..................................................................................................................................................................................................................................................................................................................................................................................................................................................... 99
5 -2.380PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;  ali follow..  11  87.SDDKPKESIQDYEQEY-------ENQLK--------------DILETI--IGVEDVSIVLKIFEKNRKTQETSTNETDKQGGKRTVSEMSSVQTKKPDIRGVLVVAQGVDNVQIKKTIIEAVTRVLDVPSHRVAVAPKKM......................................................................................................................................................................................................................................................................................................................................................................................................... 227
6 -2.260PB002776 gi|157737147|ref|YP_001489830.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]gi|157699001|gb|ABV67161.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]  ali follow..  13  288....LTKTKDWTYEKEYRIVLNRLMDYEIKEEDRKL----YDFNCLKGVIF-GIKTIEIIINKCHENNILDFEFYQAFYCKESKNIQ-----HKKLDVNIINDLIKKAKQNKLDLNIEFL.............................................................................................................................................................................................................................................................................................................................................................................................................................. 402
7 -2.170PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033;  ali follow..  11  1MAMHTWFECKIRYEKV-----ENGMQKKVTEPYLVDALSFTEAEIIEEMTPFISGEFTVSDIKRANYSEL--IFITLDEKSGAEKKTSTQ---------VQAADLRDAVKKLDEGMKGTMADYQIG........................................................................................................................................................................................................................................................................................................................................................................................................................ 131
8 -2.150PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]  ali follow..  10  98IYNYERPSQLTQWPVQIKLAPVNAP--FDGAKLLIAA-----------------------DCTAYAYASFHEKFI-------KGHVTLIG-------PKLDSVDYSEKLTEIIRRND--IQSVTIVMEVPCCGGLEMAAKKALQDSGKFIWQVATISIDGRI.................................................................................................................................................................................................................................................................................................................................................................................... 222
9 -2.120PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;  ali follow..  13  5......EEVRTGWSRWDSLW--NFLKGVFLLRIAVVDGGGIGKHITARLEILALGTNAAATVAMIKERAIIYNAPRVEAITGSLAIILADAMLGELTPAMAAAIAASPARKFL------INRSGVEVIGVTPEPLPHLIEALV....................................................................................................................................................................................................................................................................................................................................................................................................... 161
10 -2.040PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;  ali follow..  11  1MATQAIDATIFASSHPDIAKRTSISGLLISCVMLLIGILSFASTFELEDKSSTVSMALMVFGTGLFLLGIFRLFWKSKEVVYVPTGSIAKERSIFFDLK------MDKLTDLVNSG-----SFSADSKIKSEASGNIRM-DVILSADNKFAAVQLFQFVPYTYQPVTAVHYFTNDAAAAVAAF............................................................................................................................................................................................................................................................................................................................................................... 172

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.