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Query: [S] KOG2172 Uncharacterized conserved protein, from COG1018

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGGGEKRKSSFKNLANAKKRRTGPHLPSSILKTIANEKRPLNSDEGDDEIDSAYGDFYEYEEGVPEEESRKNNRYERVVNYEFELAEDCEDENVESEDDDDDDDDDDDDRHSRMLKNVTELPISAFQGESKNKRVVFTEPYPESEFNPTRDVLEGKSLTTIDDFMEPLQGLHGNSQLSNMISRMRKDTQSLVHAPLPKPEQERLERDVANELVYKGFDIWVPLVKRNREAPTIYFNQDVNVGYSTVGAIASQFHPRTEFEMKMASLLDDHEILEAHKEDGARLLEFNEVSMEDHIKRRNHVAKMRSMLFRVDLKHKRIKQIKSKTYHRLKNKDLNQSGVGAFMEPAMAKEEAKKQEARRVKERMTLKHKNTGQWAKRMLSRGLNRKYDVTQAALSKQLQIHATLSRKMNSTKDESSSDEEDLNDGSDQDTSKLIAEAKEKILKTVDDDEVPISRLMSLPFMARAVKKKNEEAKEEGKRDIEELEKFGGAETSKKSTNVVGRRVFGAEAPKESEKESDNLFDNSDSSDNDMEDNELEAVKDNASPARNTETIMEAEKLDDIAGNPASKTTFDVALYASGSWKKMTGCKNAESKKASKTHVPISQSQDKKESSDSESDDSESDDSESEAEQMVDGILTCGSKETYEIPCQAELVSRAFAGDDVEGDFEKDKQEVLNQEVPEPEKPVQVAGWGHWTNNQNKRGLPSRIVREHEEAKKTREQALRKRKDASFKHVIISEKVDKKAEKLQTKSLPYPYTSKEVFEQSMRMPIGPEFNPTTIVGVLNRPEVVKKAGVIIKPVKFEEVNPNDEHPRSHQKQKPKKKGGKLast
1 -4.050PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;  ali follow..  11  34...........................................................................................................................................................................................................................WFALVEHVNRKGQY-----------KVFRYPFGKEPK---DSDIWNFIAKK----PSLIKKYDHIKTSSHADSIPQPKKMNPKRMQ----RVLNKSKKQSAVSTKA-QAEMQKLHEALKKEKKSQSKEKRQALKQYKYQLKQEKRHQKRQG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 162
2 -3.200PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;  ali follow..  11  46.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TRPDLTSEELSEKTKDSLNYLYDRHYTWNTNLEVTTDSVTMECLPIKDTYIALYKGDRVVVAEFAIHPADSVDSVWVKLAHTQEEQGW-----------------RETELKESFVPTDSISQSDTHASYFMIRAFRRKQLQLVYFNDIDSVYAFSATVYESMQVFVPDTWE-----HFYFNPT--------LSPFKVPFILS................... 242
3 -3.170HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;  ali follow..  12  19................................................................................................................................................................................................................................................................................................................RELLLIGKRKDEDDMAKSTKTYEERIRALEKKEQESIEATKKLIAQRKELEKRKKAEESKKRTHR..................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 83
4 -3.070PB015954 Q6WBB3_BIFBR/1-225 PB015954; Pfam-B_15954;  ali follow..  8  75.....................................................................................................................................................................................................................PYTILNWLALLVENRRFQ--------PTTAVAAQGIEYLRQVFLPDISQADVIV--GYRADDSYFSFARTFVNNAISLDQLADAMRLGELGKQIVLISS---RAFAALQFQDCEIARASTYHVLRNERDV------------TAREAYRRKSAEADIDGLFMRDIIREKVTNDDPR................................................................................................................................................................................................................................................................................................................................................................................................................................................. 225
5 -2.780PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;  ali follow..  13  10...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GWSRWDS--------------------------NFLKGVFLLRIAVVDGQGGGIGKHITARLRQELPPEVEI-----LALGTNAAATVAMIKAGANEGATGERAIIYNAPRVEAI.................... 102
6 -2.770HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709;  ali follow..  10  7................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NDDVLVKKFFSENRIDVPDDGFSRRVMRRLPD---WT................................................................................................................................. 48
7 -2.530PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete)  ali follow..  9  323.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TASKTLYGKAMNDHLTKIITQK--------------QVLEIWNDHRRLGL---------------FFEIPANESDLIGSDMVNVLKKDSWKNGQQW---DFYPYP-ADPENYQKAVELLGGSDW................................................... 436
8 -2.430PB028090 gi|167758043|ref|ZP_02430170.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]gi|167663940|gb|EDS08070.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]  ali follow..  13  25..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ILANERRTKVGGIFCFLIVPTVY-----IAIYVGAANGAEW-------ALNNPTYVAKLYAATAGCIGFMMLKYKWKIGKTN.......... 108
9 -2.400PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361;  ali follow..  7  17...................................................................................................................................................................LLASCNSEDMTDNPVETLSE--GMYPLTFTAMQGEVVATPQTRVSDYDDTDGKHKKWDG-VKIGTDGAVGSYTLDSDGKPTTSTSNIPAYWQSTA-SQTVYGWYPNTADISLTGQDNTGNKFPYVLKGVSSKQYSYK-----QLNLEHQL-VKFRVKLNGDV................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 177
10 -2.280PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;  ali follow..  7  281.................................................................................................................................................................................................................IIKNKVDFSYYLDYL---NLMRDLNIAIDSE--------NIIMPKNLVIAHDNAVKLLYQMKHEVEEQQYKVRFEKIKDLEKTIDNYAFIVPKQASDLL----TEGKALSHVGGSNYKQHIEGKTTIIFVRDKQDLEKSLYTLE-YKNGQIYQLRGKHNCDPTKWAKLLKSKTKVLQN................................................................................................................................................................................................................................................................................................................................................................................................................................................... 452
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.