current user: public
If you have questions about the server, please let us know.

Query: [MU] KOG2516 Protein involved in dolichol pathway for N-glycosylation (mannosyltransferase family), from COG1018

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500    .  510    .  520    .  530    .  540    .  550
# Score Template Links and tools%idFirst MRWSVLDTVLLTVISFHLIQAPFTKVEESFNIQAIHDILTYSVFDISQYDHLKFPGVVPRTFVGAVIIAMLSRPYLYLSSLIQTSRPTSIDVQLVVRGIVGLTNGLSFIYLKNCLQDMFDEITEKKKEENEDKDIYIYDSAGTWFLLFLIGSFHLMFYSTRTLPNFVMTLPLTNVALGWVLLGRYNAAIFLSALVAIVFRLEVSALSAGIALFSVIFKKISLFDAIKFGIFGLGLGSAISITVDSYFWQEWCLPEVDGFLFNVVAGYASKWGVEPVTAYFTHYLRMMFMPPTVLLLNYFGYKLAPAKLKIVSLASLFHIIVLSFQPHKEWRFIIYAVPSIMLLGATGAAHLWENMKVKKITNVLCLAILPLSIMTSFFISMAFLYISRMNYPGGEALTSFNDMIVEKNITNATVHISIPPCMTGVTLFGELNYGVYGINYDKTENTTLLQEMWPSFDFLITHEPTASQLPFENKTTNHWELVNTTKMFTGFDPTYIKNFVFQERVNVLSLLKQIIFDKTPTVFLKELTANSIVKSDVFFTYKRIKQDEKTDLast
1 -4.450PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708;  ali follow..  7  1....................................................................................................................................................................................................................................................................MN---------GI-P---QLIRRLSDASRLVPLALLAVVAAVI-------YVWRPLFHGLIYRVAYSPSLLILVGTTVVAGIALVFWPRMGEDPLESAVTKWSILGTIVVAALVLSVAYSIPAGMAEERSLAQDATADAEAIVPEAVANVQTKGSVSYRQHELGASDIARTEDGRLAWSYPIQPGPFQVRLSGHQRGVLLSDMTAMEDREMQAFDEHEFARGQAMLFHRSAD........................................................... 227
2 -3.640PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;  ali follow..  11  38....................................................................................................................................................................................................LTMTAGLILSLLGPAYLVFFADLQITAGMVWVAFLAVAAIFGVLWFVEPLTYFPILGSAAMYQAFNIQSSIGAKAGSKRGDLAAVMAIGGAATMHLLSLLIFV---------------GFLGTWLVSLVPVEVIEVARYIMP--SLMGAVLVQAIVSMRNVRATVVALGLAVVIQLLVVPA.............................................................................................................................................................................. 216
3 -3.580PB012386 gi|82541244|ref|XP_724876.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii str. 17XNL]gi|23479680|gb|EAA16441.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii]  ali follow..  11  1...............................................................................................................................................................................................................................................................FDIYIFNDSTNIP---GT-----------------------------------------VFSFVSKYDYICNKAVQDISEDLIKIELNQNVSINKIFN-----------------------------ILKASQASENTQNLRKKHAPIKVLINRKNFNLYQX---------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXNFDTNESDKIKGDKNYYNSLENFEGYSYKKIYK--DIYDNLREATKHENSHFQHDEEILFHSSDANTNKESLYELTENELKNIKKK 206
4 -3.490PB028090 gi|167758043|ref|ZP_02430170.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]gi|167663940|gb|EDS08070.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]  ali follow..  8  10.......................................................................................AGWQLLGWLLVFAGLILANELARRTKVGGIFCFLIVPAALTVYFIAIYVGAANGAEWAL--TYVHMNSWFHYAKLYAATAGCIGFMMLKYKWKIGKTNWFKVFPFVIVAIILIAVVSDFESGVRGAMALAEYGDRWWLSSENVVNGIAGILNILCMTGWWGIYSSKDKKDMLWPDMTWCFIIAYDL--WNFYTYNNLPTHAWYCGLALLLAPTFANALWNKGGWIQNRANTLALWCMFAQVFPMFQ.......................................................................................................................................................................................................................... 265
5 -3.310PB053244 _HOMD.0087087_ pint_c_2_2642 Prevotella intermedia 17 [158005 - 157583] (REVERSE SENSE) ORF  ali follow..  9  3................................................................................................................................................................................................................................VYAIGGLLMAVGTGLYAFFIIQDVACIVML-IGAICFATMQMRQQYLGTN----LTIRRLRKIMVLADIGFILAGLFMVEDSYVKQYLANSIGGYTTYVNIFYHNWVVILLIATALEVYTLHRIDYLIEK..................................................................................................................................................................................................... 129
6 -3.300PB069407 _HOMD.0084606_ pint_c_2_12 Prevotella intermedia 17 [3585 - 4295] ORF  ali follow..  8  121..............................................................................................VKSLCYFVMVVLLITVLVLSFKLIARFRNSENIFLMRNLKLI--RIMAFSILAYYIIWWGITLVEVYFIQQSFSLAGQPIDIAGSLDFPNGLFEIPFIFIIYEIFAIGVRM.......................................................................................................................................................................................................................................................................................................................................................... 229
7 -3.200PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;  ali follow..  13  2................................................................................................................................................................HNFKEKIQFSKIRSRSCPFMQQNKFRKAIVAILMPMIL----VVSFGNCFGKFAIVKKVYEVNDGFNVMYFPFSILYFVGFFFD-------------LILFNLIE----FWGNNP.................................................................................................................................................................................................................................................................................... 109
8 -3.160PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;  ali follow..  14  14...................................................................................................................................................................................................................................SNFLLEGTIMKLTVYFDGTFW---LVEHVN----GQYKVFRYPFGKEP-WNFIAKKLPSLI....................................................................................................................................................................................................................................................................... 75
9 -2.650PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890;  ali follow..  12  7.................................................................................................................................................................................................................................................................................SPW-YLLLFACPIIFASIMKKEFIGRTAKSLSLALAIFCIFGSVLPAWSQEIVAGELERCFLAMP..................................................................................................................................................................................................................... 77
10 -2.150PB019278 gi|154508461|ref|ZP_02044103.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]gi|153798095|gb|EDN80515.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]  ali follow..  7  102..........................................................................................................................................................................VTLPEAQELAEARRRGAASLGLSVAILVSTGIPLFAFRGLSETGLVPFNEDTATFLALAVDLPLVALGVIMLLTR----SRLFTNVKHLVDLEFT---PDPIVTAW---HEDRRMRRLAIAVGLWICAALPLAVVQALPPIGVGMGVPAGADNGTLNGGD-LSELALALSVVLVALGLWIFLPANWAVQTQQTLI.......................................................................................................................................................................................... 292
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.