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Query: [S] KOG2827 Uncharacterized conserved protein, from COG1018

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSATKHNERVGRRNDRKRDASQACLPERSPSLRSEPRQQRSHPYLQTRTNTHRQRPMIRPSSVVSMSGRSIAPSDSSENDDRHFDVDEEMESMSLDSPLPIEVPARPFPDKPYYWMNDYKTLEFIRTNFPSDSFYVMHNGKIIENFNAFIDENMGQSLVKYSFHLRVRGGKGGFGSLLRSFRVNKSTNKLMMRDLNGRRMASVDEEAKLKRYLEKQARKEQELKEKRKAKLEKLTAGPAKHMFEDQDYLSRREEIINKTEDACEAGFALMLEMKRNSRKSKEQENKNDEDEDDDVNAEDVTDLFNDRGGRKRKIAAPSIGEDGGNKRINDESDDSEDDSENEVDPEELEAIRQYFEAKKQDEKDNGEGTSEAVPEVLVDEQEIEPAKRPRLDSASNIDDLPKIDVKTPCEYGPISLDDFTSAEDLELLGLEHLKSALNDRGLKCGGSLVERAARLWCVKGKQPREYPKNILTPELKKKIAEEEEAERKAAKKAKKSKKNQLast
1 -5.840PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]  ali follow..  9  39................................................................................................................................................................................ALHLKGLKNEDSFLYNTYLK-KTAAHTQDRTVLFDFITSEIFNQTAISAQIKAQEDHLRNMPVHEFVDVSSEMEAEELQKANRVLDPEFFVRKEASEETQPEEQLQLGKPLDFNKAETHSFSEWLKLTAFNKIDRSKEVKETISASASDKTEASSENTIIEETASETPLELETTIPSIEVDQDPERARRLELIDKFIESNPKIKVSTPDSNFKKPNLE-------------------------DRFQPSDSLMTETLARVYVEQK--------SKAKQAYRILSL---KYPEKFFADQIRAIEKLQEN................ 313
2 -4.740PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;  ali follow..  18  94................................................................................................................................................................................................KKMNPKRMQRVLNKSKKQSAVSTKAQAEMQKLHEALKKEKKSQSKEKRQALKQYKYQLKQEKRHQK.................................................................................................................................................................................................................................................. 159
3 -3.910PB030138 Q7MX14_PORGI/1-113 PB030138; Pfam-B_30138;  ali follow..  8  23.........................................................................................................................................................................................................................DQRRDELEKRIERIRREVEQEEQAELDGQSSSHDYSGYRPRIRGTFVEGTQHLKERQLQGETQSTRSGRT..................................................................................................................................................................................................................... 92
4 -3.720PB022697 Q5LAY4_BACFN/1-165 PB022697; Pfam-B_22697;  ali follow..  14  63..........................................................................................................................................................................FGGFCQLIQNGYGGYIFDNPFAKVM--RLWGAEDFSKLVYKAKK-DAHRHDLEKERTEDEFMAMYEQYEAFDDLEEEYLDIEEEVTALVASYVDDHLEL....................................................................................................................................................................................................................................... 160
5 -3.050PB062763 Q9F6U5_BACTN/1-245 PB062763; Pfam-B_62763;  ali follow..  10  43...........................................................................................................................................................................................................................................................................SLGTKSEKQDTLHSEASDEDADIIGKSRFRMAPTRTTAAISTQEAAISEKGIELSEEEATFDDGNTETASRPTQVPEDKLDETFTSISPEELEYGEDEPEDDEPGKGQASGSAFEDIDMAVRTIKKDSPSEAEMRHAGKVMTELDGTEL-------------YSRITERLT------DEPMSERLAKAM............................................ 212
6 -2.970HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  8  20..............................................................................................................................................................................................GCGKIQPDRMENILYDYHLSISMGNNLSYSDNYQKEAYKNYVFEKHHITEAEFDSSVWYTRHTEELASLYKKLGERFRSEKKHMQELLALRENKPAVSLPGDT............................................................................................................................................................................................................... 129
7 -2.880HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;  ali follow..  17  1...............................................................................................................................................................................................................................................................................................................................................................................................................................MTPYKVSHQLKKLN----SSSLTKKNMTMEENTVHPARKLLLG.......................................... 40
8 -2.730PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946;  ali follow..  7  167.............................................................................................................................................................................................................................................................................................................................................................MAAHDNATRKIEAIHEKERAAEQRRWEIERREREQQRQLQRKKDAEDFIANKSKFFGLVITDEEIIVKVLESIDEYYNEG-KTQGI--------CVFGYKKADTLILSARTVEVDLRTLEVVCHGKHNQDTEYHERIIDLVNKNANLIRER 319
9 -2.690PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205;  ali follow..  12  91.................................................................................................................................................................................................KTDGKSL------SFVRSWITFRLRKHQSSRLVNVPKLKKHVFYGHVCVQHDVKDLPIVHSFSEEENDIHAYDVTFLPQKEEVEYVEKDEQTTIKA................................................................................................................................................................................................................... 181
10 -2.570HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  4  19..............................................................................................................................................................................................ACDHNETYADQRDRELDSINAFLR---NENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNNEYVLFESNGIYMQVINDGCGDYIAKGKTQN......................................................................................................................................................................................................................... 108
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 3 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.