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current user: public |
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| Query: [S] KOG4030 Uncharacterized conserved protein, contains SPRY domain, from COG1018 |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . | |||||||
| # | Score | Template | Links and tools | %id | First | MATSVLCCLRCCRDGGTGHIPLKEMPAVQLDTQHMGTDVVIVKNGRRICGTGGCLASAPLHQNKSYFEFKIQSTGIWGIGVATQKVNLNQIPLGRDMHSLVMRNDGALYHNNEEKNRLPANSLPQEGDVVGITYDHVELNVYLNGKNMHCPASGIRGTVYPVVYVDDSAILDCQFSEFYHTPPPGFEKILFEQQIF | Last |
| 1 | -4.470 | PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572; | ali follow.. | 8 | 36 | TLLFLSSCHYTRPDLTSEELSEKTKDSLNYLYDRWNTNLEVTTDSVTMECLPIKDTYIALYKGDRVVVAEFAIHPADSVDSVWVKLAHTQEEQGWIRETELKESFVPTDSISQAIHFFSDTHASYFMIIFALFVGVYLFRAFRRKQLQLVYFNDIDS-VYPLFLCLLMAFSATVYESMQVFVPDTWEHFYFNPTL. | 232 |
| 2 | -3.420 | PB012771 _Gut.Meta.Jp.0094636_ gi|162817068|dbj|BABA01027641.1||1 (+ 249:636~0 complete) | ali follow.. | 6 | 14 | .................................................................................................................................................MENGIHYTLVGDYYFPTCMLGDKSPNSLYERYLQEKHPHEYVRLIWADEL. | 67 |
| 3 | -2.880 | HGC00921 gi|162841401|dbj|BABA01003308.1|3.0 TMP01242; | ali follow.. | 7 | 49 | ........FETAHSYYVHCYGEQSRNSKKHQANVKTARLYISH--IQVLNLAVIRMEIKESHKALYWGQKIIEGERKRTGIPIYNPTIAKVKVHYDIFMEGYEKQKSLQSLTNRSLEQLASMRVQADRLILDIWNQGLIIIIGPEKNRIRRFFKICLSIHPIFFWKSLQKITFRYGT................... | 261 |
| 4 | -2.670 | HGC00044 gi|162658718|dbj|BAAX01000887.1|1.0 TMP00920; | ali follow.. | 8 | 14 | .................................................GVGNAASPVGAYASSTEWNYDNEVAYGFGYGLSYTTFTQEIQGQPEISVNIDSETGAPQAYATFNVKVTNTGKVPGK-TSVQIYGQAPYTEGGLEKVAIQLLNFEKSSELAP----GASEIVSVKVDL-TYVLDPGTYYFAAGNG.. | 170 |
| 5 | -2.640 | PB015879 Q5LJ14_BACFN/120-411 PB015879; Pfam-B_15879; | ali follow.. | 10 | 118 | .............................LDNGPLRFTVKLVYNPLVVKGDSTIIETRTLDAGSYCNKTVVSYTNLLAVGIVLHE---PDGAIVADAANGYMTYVDPTDNAGGDNGKIFVGAAFPTLVKEA-------KAVLFPEKEKKELRGGADGHVLAISEYEPGADFTYYWGKADIKDSAAWNAYMADFA.. | 283 |
| 6 | -2.610 | PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119; | ali follow.. | 9 | 248 | ......................................................LNNLPIENGLLTVEA-IIINNTAYVNINKNSVKHNNFAVNSEENNWYLTGRD---------------------PLLGLFVEK----FFKDDVELYFVVNNSTKNIFSSVGISSLSTNNPKL--FTFTFDNGFS......... | 381 |
| 7 | -2.600 | PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete) | ali follow.. | 9 | 231 | .................................................................PWESYFLLAEAAEYGWISNITPKEAYELGSSFEYFGVSEYADQYINSTTRNRLGTSVAFMNDHLTKIITQKYIAQMPYQVLE---IWNDHRRLGLPFFEIPANESDLIGSDMMRYPTTLNADPENYQKAV. | 422 |
| 8 | -2.470 | PB053359 gi|153891307|ref|ZP_02012332.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]gi|151582630|gb|EDN46158.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] | ali follow.. | 17 | 67 | ......................................................................NDGAGWLRIGLAGHQPGLGEVYISTGSLYLCTTA............................................................................................ | 100 |
| 9 | -2.440 | HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636; | ali follow.. | 10 | 16 | ................................................................................................................................VLAITCLMATTAFAAGTGDVAGAVESVDNVVFPAIDLILAVFFFAKLGTAYFEYRKSGQFEWAAPAIL | 95 |
| 10 | -2.410 | PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033; | ali follow.. | 9 | 4 | ...............................................................HTWFECKIRYEKVMENGFTEAEARIIEEMTPFISGEFTVSDIKRANYSELFPSDEESADRWFKCKLIFITLDEKSTQVLVQAADLRDAVKKLDEGMYQIGMVSETPLMDV----YPYSAGPNDKPEFDPSK.. | 158 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67. |