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Query: [S] KOG4463 Uncharacterized conserved protein, from COG1018

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSSANIVPSNMGITKFLLLTISTSSVVAGVFALKPFFHINFGLHLLSHYQYWRILLWQFIYWNSTEVFQALFIIYQARDVERLLGSHRFASFCVYMFILGMFVTPIFSFLYSLLFKNLDYIQPGPTFLIFAILYQYYYIVPSTVFVRLFNIKFTDKFQMVIPMIGLAFSHFPSTFINAFLGWTMGMFYHLSLLPGTSWRLPIRFVKPALSPTHVFIRPPYSDMQNASTFNPETLFALPTGLDAERTENENQVENPVSNADANDSPTRQNARATAIASSSNTAASFRNRQQISHPPLGRTSSSSVLPTGPASQLYDMLSGRSERPELGNIREEDINTVQTIMQTSRAQAIQALSQTNDVQRAVELLLEQTADYLast
1 -6.930PB044380 A7LRP7_BACOV/1-223 PB044380; Pfam-B_44380;  ali follow..  7  7..................................................................................................................................................................................LSIRLACACYILYKVCGQKKKIREICDLLYTKLPPVKEKELENVLSEPGGESGIMGSTCFVYLDEDAGKSVAPYMSQPLETAADFIGEEEDVAEEEVECKLPLEEMRMLKEEQEELDGTYPAVDAVSRVVTPDDLDNAGNVLFKLNDADKDEEKSLRAALTLHTIRETDLFEIFSSQVENKNVIDSLMGKYLD. 199
2 -5.780PB062763 Q9F6U5_BACTN/1-245 PB062763; Pfam-B_62763;  ali follow..  7  2...........................................................................................................................................................TKVFLIVSVACNV-------------WFLLMLLSDRITETKFVRFLKGAAGLWRSLGTKSEKQDTLHSEASDEDADAPTRTTAAISTQEAAISEKGIELSEEEATFDDGNTETASRPTQVPEDKLDETFTSISPEELEYGEDEPEDDEPGKGQASGSAFEDIDMAVRTIKKDSPSEAEMRHAGKVM-LDGTELYSRITEREPMSERLAKAMAVFVD. 217
3 -5.230PB003564 gi|46242789|gb|AAS83494.1| TraD [Bacteroides fragilis]  ali follow..  9  75.....................................................................................................................................................................................................................................STRTTAAIPTQEAATSEKGIELSEEEATFDDGNTETVSRPTQVPEDKLDETFTSIPPSELEYGEDKPEDEEPDKKQASGSSFEDIDMAVHTIWKESPSDEEMRHAGKVMTEL--DGTELFTRITEREAMSERLAKAMAVFVD. 217
4 -4.730PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]  ali follow..  7  160..............................................................................................................................................................................................................................................EWLKLTAFNKIDRSKEVKETISASASDKTEASSENTIIEETASETPLELETTIPSIEVDQDPERARRLELIDKFIESNPKIKVSTPDSNFKKPNLEDRFQPSDSLMTETLARVYVEQKNFSKAKQLSLKEKSGF 299
5 -4.260HGC01213 gi|163579070|dbj|BABE01006032.1|2.0 TMP01709;  ali follow..  6  2.............................................................................................................................................................................................................................AVQRNTSGARTARGAGTGANGPSGGPSQNNRSGKPRKRRISKKQQAIYRRRRIVAGTVLLLIIALIVFCVYSLGRGIGAVNSMIHHDEVYAISRDATPAPKKVSNVKDCSASDVTLQLSAASQSGSLDFTATIVHEGSGNYLVDGSDSG.. 154
6 -4.120PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;  ali follow..  7  49....................................................................................................................................................................................................................................................................................SSEPSQEPAADQPAASQKATSESTVQSGEGEKEVFKPASDDKPKESIQDYEQEYENQLKDILETIGVEDVSIVVNVDATSLKIFEKNRKTQETST. 144
7 -3.850HGC01179 gi|162738527|dbj|BAAZ01025469.1|2.0 TMP01658;  ali follow..  15  1..................................................................VVVSILFQKARKVLNNERGEANYFSTVVFIFIAVLLLAFIIDLF...................................................................................................................................................................................................................................................................... 44
8 -3.750PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;  ali follow..  8  63...............................................................................................................................................................................................................................................AEAKEACVTAADTVRNNANEYNALLNGDAADAAAVKAEQVKDSKTVESLGKELKASAPEYEGCVAENAQGLDAAAVKLNEQADWYETHEKSLSKAVRAVVESKAAKDDAKTNLTAK--LDEA-SKLLADSDG. 193
9 -3.430PB028090 gi|167758043|ref|ZP_02430170.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]gi|167663940|gb|EDS08070.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]  ali follow..  5  6.......YGENAGWQLLGWLLVFAGLILAIVPAALTVYFIAIYVGAANGAEWALMNSWFHYAKLYAATAGCIGFMMLKYKWK-IGKTNWFKVFPFVIVAINILIAVV......................................................................................................................................................................................................................................................................... 127
10 -3.130PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8]  ali follow..  6  9..................................................................................................................................................................................................................................................QAEQQRLEAVTAQVADVEQSLEKTKAAAEKQKKKLEALQKETKAARATALTVQDIEAMGKKATFGNNITLTPDECRTLKDYAVSSFAEKAEKLKYKQKYEQAEKSASVWKRRFEALNEKYLELKKKAQPY 138
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.