current user: public
If you have questions about the server, please let us know.

Query: [P] COG0003 Oxyanion-translocating ATPase, from COG1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .
# Score Template Links and tools%idFirst MRVILMTGKGGVGKTSVAAATGLRCAELGHKTLVLSTDPAHSLADSFDLELGHEPRLVKENLWGAELDALMELEGNWGAVKRYITQVLQARGLDGVQAEELAILPGMDEIFGLVRMKRHYDEADYDVLIIDSAPTGTALRLLSLPEVGGWYMRRFYKPLQGMSVALRPLVEPLFRPIAGFSLPDKEVMDAPYEFYEQIEALEKVLTDNTQTSVRLVTNPEKMVLKESLRAHAYLSLYNVSTDLVIANRILPETIDDPFFQRWKSNQQVYKQEIYDNFHPLPVKEAPLFSEEMCGLAALERLKDTLYKDEDPSQVYYKENTINIVQGSNNDYSLELYLPGIPKEQIQLNKTGDELNVRIGNHRRNLVLPQALAALSPAGAKMEDDYLKIRFAEAVKRLast
1 -6.370sp|Q6P2S7|GNN_HUMAN Tetratricopeptide repeat protein GNN OS=Homo sapiens GN=GNN PE=2 SV=3  ali   7  90.ELDFNNVAADSSLDSVPRFFRINPTPT................................................................................................................................................................................................................................................................................................................................................................................ 116
2 -6.220sp|Q9HCU5|PREB_HUMAN Prolactin regulatory element-binding protein OS=Homo sapiens GN=PREB PE=1 SV=2  ali   18  26.GLLIAAGGGGAAKTGIKNGVHFLQLELINGRLSASLLHSHDTETRATMNLALAGDILAAGQ.............................................................................................................................................................................................................................................................................................................................................. 86
3 -6.220tr|B5MC98|B5MC98_HUMAN Uncharacterized protein OS=Homo sapiens GN=PREB PE=4 SV=1  ali   18  26.GLLIAAGGGGAAKTGIKNGVHFLQLELINGRLSASLLHSHDTETRATMNLALAGDILAAGQ.............................................................................................................................................................................................................................................................................................................................................. 86
4 -5.610sp|Q8IVG5|SAM9L_HUMAN Sterile alpha motif domain-containing protein 9-like OS=Homo sapiens GN=SAMD9L PE=1 SV=2  ali   9  48AKIINLYHHPGCGGTTLAMHVLWDLKKNFRCAVL-FAEIAEQVINLVTYRAKSHQDYIPVLLLVDDFEEQENVYFLQNAIHSVLAE...................................................................................................................................................................................................................................................................................................................... 138
5 -4.740sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related protein 2 OS=Homo sapiens GN=LRP2 PE=1 SV=3  ali   15  3.......GNGVTFRSGADLNMDIGVSGFGPETAI---DRSMAMSEDFVMEMGKQPIIFENPMYSARDSAVKVVQPIQVTVSENVDN...................................................................................................................................................................................................................................................................................................................... 78
6 -4.290tr|F8WBB3|F8WBB3_HUMAN Uncharacterized protein OS=Homo sapiens GN=ABHD1 PE=4 SV=1  ali   14  41..VLLLPGITGSSQDTYVLHLVNQALRDGYQPTGLFVPAILKI................................................................................................................................................................................................................................................................................................................................................................. 81
7 -3.880sp|Q9NX45|SOLH2_HUMAN Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 2 OS=Homo sapiens GN=SOHLH2 PE=2 SV=2  ali   7  1...........MASSIICQEHCQISGQAKIDILLVGDVTVGYLADTVQANIAEVTITISDTKEAAALLDDCIFNMVLLKVP---------------------SSLSAEELEAIKLIRFGKKKNTHSLFVF----IPENFKALTEPLTMEKMSNVV................................................................................................................................................................................................................................................. 133
8 -3.650sp|Q8NAG6|ANKL1_HUMAN Ankyrin repeat and LEM domain-containing protein 1 OS=Homo sapiens GN=ANKLE1 PE=2 SV=2  ali   13  77...IFYVGKGTRARPYVHLWEALGHHGRSRKQPHQACPKVRQILDIWASGCGVVSLHCFQHVVAVEYTREACIVEALG--IQTLTNQKQGHCYGVVAGWPPARRRRLGVHLLHRALLVFLAEGERQLHPQDIQARG.................................................................................................................................................................................................................................................................... 208
9 -3.650sp|Q9UPA5|BSN_HUMAN Protein bassoon OS=Homo sapiens GN=BSN PE=1 SV=4  ali   17  18....TVRAADGMIYSTINTPIA--------ATLPITTQPASVLRPMVRGGM......................................................................................................................................................................................................................................................................................................................................................... 56
10 -3.480sp|Q6IEE7|T132E_HUMAN Transmembrane protein 132E OS=Homo sapiens GN=TMEM132E PE=2 SV=1  ali   13  61....TLAGL-EPGTTPFKVVSPLTEAVLGETLLTVTEEKVSQAQVVASLALSLRPSPGSSHTILATTAAQQTLSFLKQEALLSLWLSYSDGTTAPLSRDYGLLVSSLDE-----HVATVTQDRAFPLVVAEAEGSGELLRA............................................................................................................................................................................................................................................................... 199
FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 4 9   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24