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Query: [P] COG0004 Ammonia permease, from COG1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MFQKILIIGVSTLLLLTSPIMGNAWAQVPGTTPPADTGDTAFMLISAALVLLMTPGLAFFYGGFVRSRNILNTLMMSFVLMAIVGVTWVLWGYSLSFAPGLPFIGGLQWFGLNGVGLETTGYLQGSEPANVVSYAGTIPHQAYMIYQAMFAIITPALISGAIAERMSFRAYCLFVLLWSTFIYTPLAHMVWAKGGFLGLYGGLGALDFAGGTVVHISSGVSALVAAIVLGPRKTHPDRLSPPHNVTFILLGAGLLWFGWFGFNAGSALSVASSTSGSFITNPATTAFVATNTSAAAGALMWLILEGVLRGKPTAVGAATGAVAGLVGITPAAGFVTPLASILIGFITAFVCFYAVSFKHKLNVDDALDTYPVHGVGGTVGAILTAFFATAEVNSGGKNGVLKGNFGELGVELAAIVIAYVIAAVGTWIILKIIDATVGLRVKEEAEYQGLDISEHGEEAYNSEFSDRIVPLast
1 -4.880sp|Q96AQ9|F131C_HUMAN Protein FAM131C OS=Homo sapiens GN=FAM131C PE=2 SV=2  ali   21  79..........................................................................................................................................................................................................................NVAALATSSLVGVVQSIKDHITKPTAMARGRVAHLIEWKGW................................................................................................................................................................................................................... 119
2 -4.690tr|E9PQM0|E9PQM0_HUMAN Uncharacterized protein OS=Homo sapiens GN=PTPMT1 PE=4 SV=1  ali   20  1.........................................................................................................................................................AATALLEAGLARVLFYPTLLYTLFRGKV--PGRAHRDWYHR--IDPTVLLGALPLRSLTRQVSRAGEPGPLPR.................................................................................................................................................................................................................................................... 69
3 -4.510tr|E7EM71|E7EM71_HUMAN Uncharacterized protein OS=Homo sapiens GN=HDLBP PE=4 SV=1  ali   9.........................................WLFVATVMMHFVSSGFPGLCVGVRSTMSSVAVLTQE......................................................................................................................................................................................................................................................................................................................................................................................................... 46
4 -4.420sp|Q0VDI3|CE028_HUMAN Transmembrane protein C5orf28 OS=Homo sapiens GN=C5orf28 PE=2 SV=1  ali   14  1.......................MASETEKTHALLQTCSTESLISSLGLGAFCLVADRLLQFSTIQQNDWLRALSDNAVHCVIGMWSWAVV........................................................................................................................................................................................................................................................................................................................................................................................... 68
5 -3.900sp|Q9UHW9|S12A6_HUMAN Solute carrier family 12 member 6 OS=Homo sapiens GN=SLC12A6 PE=1 SV=2  ali   12  1............................................................................................................................................................................................................................................KSSFAPPHFPVCMLGNRTL----------SSRHIDVCSKTKEINNMTVPSKLWGFFCNSSQFFNATCDEYFVHNNVTSIQGIPGLASGIITENLWSNYL....................................................................................................................................... 89
6 -3.780sp|Q8NER1|TRPV1_HUMAN Transient receptor potential cation channel subfamily V member 1 OS=Homo sapiens GN=TRPV1 PE=1 SV=2  ali   14  2............................ETVNKIAQESKNIWKLQRAITILDTEKSFLKCMRKAFRSGKLLQVGYTP---FRVDEVNWTTWNTNVGI..................................................................................................................................................................................................................................................................................................................................................................................... 76
7 -3.780tr|E7ESJ2|E7ESJ2_HUMAN Uncharacterized protein OS=Homo sapiens GN=TRPV1 PE=4 SV=1  ali   14  2............................ETVNKIAQESKNIWKLQRAITILDTEKSFLKCMRKAFRSGKLLQVGYTP---FRVDEVNWTTWNTNVGI..................................................................................................................................................................................................................................................................................................................................................................................... 76
8 -3.710sp|Q96RT7|GCP6_HUMAN Gamma-tubulin complex component 6 OS=Homo sapiens GN=TUBGCP6 PE=1 SV=3  ali   14  5..................................................................................................................................................................................AALTYEASKRRCWERVGCPPGHREEPYLTEAGRDAFDKFGELQLLAGGVLQAPQP............................................................................................................................................................................................................................................. 64
9 -3.680sp|Q9H1A4|APC1_HUMAN Anaphase-promoting complex subunit 1 OS=Homo sapiens GN=ANAPC1 PE=1 SV=1  ali   10  64................................................................................................................................................................................................................VGRGMFTLFSYHPVPTEPLPIPK-TGRAPPRNTTVDLNSGNIDVPPNMTSWASFHNGVAAGLKNKPKHAELANEYAGFLMALGLNGHLTKLATLNIHDYLTKGHEMTSI--GLLLGV-----SAAKLGTMDMSITRLLSIHIPALLPPTSTELDVPHNVQVAAVVGI----GLVYQG..................................................................................... 245
10 -3.570sp|Q9HBA0|TRPV4_HUMAN Transient receptor potential cation channel subfamily V member 4 OS=Homo sapiens GN=TRPV4 PE=1 SV=2  ali   15  2............................ETVGQVSKESKHIWKLQWATTILDIERSFPVFLRKAFRSGEMVTVGKSS---FRVDEVNWSHWNQNLGI..................................................................................................................................................................................................................................................................................................................................................................................... 76

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 8 1 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Jaroszewski L, Bierzynski A, Godzik A. Multiple model approach--dealing with alignment ambiguities in protein modeling. Pac Symp Biocomput. 1997;:328-39.