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Query: [J] COG0009 Putative translation factor (SUA5), from COG1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKTKRWFVDVTDELSTNDPQIAQAAALLRENEVVAFPTETVYGLGANAKNTDAVKKIYEAKGRPSDNPLIVHIADISQLEDLTGPAPEKAKTLMKRFWPGALTLILPCKPDALSPRVTAGLETVAIRMPDHPLALALIRESGLPIAAPSANLSGKPSPTKAEHVAHDLDGRIAGIVDGGPTGIGVESTVLSCADDIPVLLRPGGITKEQIEAVIGPIHVDKGLSDQNEKPISPGMKYTHYAPTAPLAICEGSPERIQHLIQEYQQGGRRVGVLTTEEKAGVYSADYVKSCGRRAQLETVAAGLYDALRSFDENKVDFIIAESFPDTGVGLAIMNRLMKAAGGRVIRLast
1 -5.670sp|Q7RTU3|OLIG3_HUMAN Oligodendrocyte transcription factor 3 OS=Homo sapiens GN=OLIG3 PE=1 SV=2  ali   20  1................................LVG----EIYGGHHSAFHCGTVGHSAGHPAHAANSVHPVH----------------------------PILGGALSSGNASSPLSAASLPAIGTIRPPHSLLKAPSTPPALQLGSGFQHWAGLPCPCTI......................................................................................................................................................................................... 97
2 -4.440sp|Q8N0W3|FUK_HUMAN L-fucose kinase OS=Homo sapiens GN=FUK PE=2 SV=2  ali   14  2..................................ELGPQDLLWMLDHQEDGGEALRAWRASWRLSWEQLQPCLDRAATLAFFRQALHKARHVLEARQDLSLRPLIWAAVREGCPGPLLATLDQVAAGAGDPGVAARALACVADVLGCMAEGRGGRSGPAANPEWMRPFS-----YLECGDLAAGVEALA-KWLSRPALLVRAA----------------------------------RHYEGAGQILI.................................................................................................. 185
3 -4.210sp|Q96D46|NMD3_HUMAN 60S ribosomal export protein NMD3 OS=Homo sapiens GN=NMD3 PE=1 SV=1  ali   12  3...........................ICKDNVVCLSPKLAQSLGN--------------------NQICVCIRVTSAIHLIDPNTLQVADIDGSTFWSHPFNSLCHPKQ--LEEFIVMECSIVQDIKRAAGAGMI---SKKHTLGEVWVQKTSEMNTDKQYFCRTHLGH----LLNPGDLVLGFDLANCNLNDEHVNKMNSDRVPDVVLIK...................................................................................................................................... 159
4 -4.070sp|Q8TC57|CB065_HUMAN Uncharacterized protein C2orf65 OS=Homo sapiens GN=C2orf65 PE=2 SV=1  ali   17  4.........................QVIKALKSSGLCESLTYGL-----------------------PFILRPTSCWQLDWDELETNQHFHALCHSLLKREWLLLAKGEPPGPGHSQRIPASTFYVIMPSHSLTLLVKAVATRELMLPST------FPLLPEDPHDDSLKNVESMLD......................................................................................................................................................................... 127
5 -4.060sp|Q9NP71|MLXPL_HUMAN Carbohydrate-responsive element-binding protein OS=Homo sapiens GN=MLXIPL PE=1 SV=1  ali   1...........RSIDPTLTRLFECLSLAYSGKLVSPKWKNFKGLKLLCRDKNAIWRAWYIQYVKRRKSPVCGFVTPLQGPEADAHRKPEAVVLEGNYWKRRIEVVMRE.............................................................................................................................................................................................................................................. 101
6 -4.000sp|A4D1E1|Z804B_HUMAN Zinc finger protein 804B OS=Homo sapiens GN=ZNF804B PE=1 SV=2  ali   12  18...............................................................PAHPTFLLHLVAATPFH------------------PSHITLQPLPPTAFIPTLFGPHLNPATSIIHLNPLIQPVFQGQDFCHHSCSSQMQQLNEVKEALNVSTHLN................................................................................................................................................................................. 110
7 -4.000sp|Q53EP0|FND3B_HUMAN Fibronectin type III domain-containing protein 3B OS=Homo sapiens GN=FNDC3B PE=1 SV=2  ali   12  30...........................................................VNGDAAQQVILVQVNPGETFTIRAEDGTLQC--------QGPAEVPMMSPNGSIPP----------IHVPPGYISQVIEDSTGVVVVTPQSPECYPPSYPSAMS....................................................................................................................................................................................... 118
8 -3.990sp|Q6NXP0|CC025_HUMAN EF-hand domain-containing protein C3orf25 OS=Homo sapiens GN=C3orf25 PE=2 SV=1  ali   16  1................................................................................................FWPGHL---LDKLQLYLPTVATDRSLALFSCVQHQPHVYPATPDHWWPLRNKNYMTHAHYDAAKVYYI...................................................................................................................................................................................... 67
9 -3.820tr|B4DET3|B4DET3_HUMAN Uncharacterized protein OS=Homo sapiens GN=NPC1 PE=2 SV=1  ali   12  2....................................PVYFVLEEGHDYTSSKGQNMVCGGMGCNNDS--LVQQIFNAAQLDNYTRIGFAPSSWIDDYWVKPQS-FCNASVVDPACVRCRPLTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRV------GATYFMTYHTVLQTSADFIDALKKARLIASNVTETMG................................................................................................................................... 184
10 -3.820sp|O15118|NPC1_HUMAN Niemann-Pick C1 protein OS=Homo sapiens GN=NPC1 PE=1 SV=2  ali   12  2....................................PVYFVLEEGHDYTSSKGQNMVCGGMGCNNDS--LVQQIFNAAQLDNYTRIGFAPSSWIDDYWVKPQS-FCNASVVDPACVRCRPLTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRV------GATYFMTYHTVLQTSADFIDALKKARLIASNVTETMG................................................................................................................................... 184

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 2 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.