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Query: [E] COG0287 Prephenate dehydrogenase, from COG1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MMGDIMFERIALIGIGLIGSSIARDVRELGLARHVVISTRSEDTLKRAEELALGTDYTVSAAEAVKDADLVIVSVPVGASESVAQQIAPYLKPSAIVTDVGSTKASVIAQMAPHMPENVHFIPGHPLAGTEKSGPDAGFAGLFRERWCIFTPLPGTDAAALERLKDFWRALGSRVDEMDAEHHDKVLAIVSHLPHIIAYNIVGTADDLETVTESEVIKYSASGFRDFTRLAASDPTMWRDVCLHNKDAILEMLARFSEDLASLQRAIRWGEGDKLFELFSRTRSIRRSIIEAGQDVDTPDFGRHALDQKKLast
1 -4.520sp|Q9NX45|SOLH2_HUMAN Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 2 OS=Homo sapiens GN=SOHLH2 PE=2 SV=2  ali   7  21....................................................................................................................................................ILLVGDVTVGYLADTVQKLFANIAEVTITLDDCIFNMVLLKVPSSLSAEELEAIKLIRFGKKKNTH-FVFIIPENFKGCISGHGMDIALTEPL---TMEKMSNVVKYWTT.................................................... 138
2 -4.470sp|Q96JB2|COG3_HUMAN Conserved oligomeric Golgi complex subunit 3 OS=Homo sapiens GN=COG3 PE=1 SV=3  ali   13  1.............................................................................................................................PSSVPNADNAFTLFYVKFR-----------AAAPKVRTLIEQIELRSEKIPEYQQLLNDIHQCYLDQRELLLGPSIACTVAELTSQNNRDHCALVRSGCAFMVHVCQDEHQLYNEFFTKPTSKLDELLEKLCVSLYDVPLIIHVIHLETLSELCG.............................. 146
3 -4.290sp|Q5T4S7|UBR4_HUMAN E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens GN=UBR4 PE=1 SV=1  ali   12  2....................................................................................PDMSPFFLRQYV-ADVFEAYTQLLTEMVLRLPYQI-----KKITDTNSRIPPPVFDHSWFYFLSEYLMIQQTPFVRRQVRKLLLFICGSKEKYRQLRDLHTLDSHVRGIKKLLEEQGIFLRASVVTASSGSALQYDT--LKACAEIAAQRTINWQKFCIKDDSVL--------YFLLQVSFLVDEGVSPVLLQLLSCA............................ 194
4 -4.050sp|Q92521|PIGB_HUMAN GPI mannosyltransferase 3 OS=Homo sapiens GN=PIGB PE=2 SV=1  ali   13  18.............................................................................................................................................................................................................................SHYLDEADVFYLNPLNWLHREFHDDASLPTHLITFSILEEEISAFLISSNYKRTAVFF------HTHLPEGRIGSHIYVYERKLKGKFN 100
5 -3.880sp|Q8N9S7|CX059_HUMAN Uncharacterized protein CXorf59 OS=Homo sapiens GN=CXorf59 PE=2 SV=1  ali   15  36...........................................................................SFSIPETIRRDVYKMQFYSSTSPPQKFSRQNDFSKYNKTIYDVLLHLSGKMPPGINSSQSLPVDNHEKRVIQLH---------LQHSSLLDFLNAQGGCISHVLPE----LLEPEDYKRWIIMSSTNTMPVSSCTPKKKCSIVIEMSKFEAWSKRA------WTDVFLQIYKVLV--LSRVVPYCSNNMPPICVQNTPKVNPCFASSNIYSD....................... 228
6 -3.690sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2  ali   17  3....................................................................................................................................................................................NDFD--VKETSH--HLVISHLDLHICDDIHAKEKESNRRITGGAMQLSHKAGDSCNHWSDATKTKNGWANELLHEFECNVE................................................. 93
7 -3.610tr|E7ENG5|E7ENG5_HUMAN Uncharacterized protein OS=Homo sapiens GN=G6PC PE=4 SV=1  ali   10  8...........................................................................................................VLDTDYYSNTSVPLIKQFPVTCETGPGKDKADLQISVLECHFVVGILGCAAECLSVTNLPCCSFSSSSCCWSPVR----HCCCRNFQP................................................................................................................... 91
8 -3.570sp|Q02809|PLOD1_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Homo sapiens GN=PLOD1 PE=1 SV=2  ali   12  2.................................................................................................................................................................RLWSNFWGALSADGYYARSEDYVDIVQGVWNVPYISNIYLIKG--SALRGELQSSDLFHHSKLDPDMAFCANIRQQDVFMFLTNRHTLLSLDSYRTTHLHNDLWEVFSNPEDWKEKYIHQ............................. 126
9 -3.570sp|Q8IWT3|CUL9_HUMAN Cullin-9 OS=Homo sapiens GN=CUL9 PE=1 SV=2  ali   18  41..........................................KKLDLCEQQPIFQNLWKNLDETLGEKALGEISVSVEMAESLLQVLSSRF-EGSTLNDLLNSQ.............................................................................................................................................................................................................. 101
10 -3.560sp|A6ZKI3|F127A_HUMAN Protein FAM127A OS=Homo sapiens GN=FAM127A PE=1 SV=1  ali   8  32.................................................................................................................................................................................................................................DALKVTTGPALQWVIPYIKKESPLLNDYRGFLAEMKRVFGWEEDED....................................... 83
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.