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Query: [E] COG1296 Predicted branched-chain amino acid permease (azaleucine resistance), from COG1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSSENLKEIRGGIGETLTVGLGLIPLGLAFGLLMVQTGFAWWWTPIFSFVIYAGSMEFLAIGMVTAGIGPFSAAVAGFMVNFRHIFYGLTFPRHRIKSGAGRAYSTYALTDESYAIVSARPPGDISGTRVLTVQILCQALWVIPGIIGALVGQVLPDDLKGMDFALTALFVVLAWEAFKNNKDYSLPLFAVVLALVSGFVAPEQMLVIALTTYFLILLLRVRFPNLDKKLEIRTSHELast
1 -5.840tr|B7Z676|B7Z676_HUMAN Uncharacterized protein OS=Homo sapiens GN=SLC9B2 PE=2 SV=1  ali   16................RVITNGMLLAGFLIR--IKHKWSSSLRSIALSIILVRAGLGLDSKALKKLKGVCVRLSMGPCIVEA........................................................................................................................................................... 89
2 -5.480tr|C9J2F8|C9J2F8_HUMAN HCG22882, isoform CRA_a OS=Homo sapiens GN=PSMG4 PE=4 SV=1  ali   10  36...............................................SLFLWVGATPHLRNLAVAMCSRYDSIPVSTSLLGDTSDTTSTGLAQRLGLGGKTGLACECGVEWGL............................................................................................................................ 101
3 -5.240sp|P04035|HMDH_HUMAN 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Homo sapiens GN=HMGCR PE=1 SV=1  ali   16  30........................................................QFYLSKMISMDIEQVITLSLALLLAVKYIFF...................................................................................................................................................... 60
4 -5.050sp|Q6ZTI6|F101A_HUMAN Protein FAM101A OS=Homo sapiens GN=FAM101A PE=2 SV=3  ali   12  1...........QLPNPPASEMRPRMLPVFFGESIKVNPEPTHEIRCNSEVKYASEKHFQDKVFYAPVPTVTAYSETIVAATWRNYRSQLTLEPRPRALRFRSTTIIF--ARSTFRTTLHCSLGRPSRWFTASVQL...................................................................................................... 128
5 -5.030tr|F8W1D1|F8W1D1_HUMAN Uncharacterized protein OS=Homo sapiens GN=PMEL PE=4 SV=1  ali   16  75.....................SFVYVWKTWGQYWQVLG---------------GPVSGLSIGTGRAMLGTHTMEVTVYHRRGSRSYVPLA-----------HSSSAFTITDQVFSVSVSQLRALDGGNKHF.......................................................................................................... 159
6 -4.790sp|Q8WWB7|NCUG1_HUMAN Lysosomal protein NCU-G1 OS=Homo sapiens GN=C1orf85 PE=1 SV=1  ali   13  156...........................................AFRVQAFSRSSRPAQPPRLLHTADTCQLEVALIGASPRGNRSLFGLEVATLGQGPDCPSMQEQHSIDDEVFQLDQLLWGSLPSG----------FAQW................................................................................................ 247
7 -4.760sp|Q8N5W9|F101B_HUMAN Protein FAM101B OS=Homo sapiens GN=FAM101B PE=1 SV=1  ali   12  9...........................LSFGEGVEFDPLPPKEVRYTSLVKYDSERHFVQLPLGLAVASCSQTVTCVPNGTWRNYKAEVRFEPRHRPTRFLSTTIVY--PKAVYTTTLDYNCRKTLRRFLSSVEL...................................................................................................... 120
8 -4.630sp|Q86XR2|NIBL2_HUMAN Niban-like protein 2 OS=Homo sapiens GN=FAM129C PE=1 SV=2  ali   14  1..............................GIVLQRSQAPAARAFLDAVRLYRQHQGHFGDDDVTLGSDA---VLTAVLMREQLPALRAQTLPGLRGAGRARAWAWTELLDAVHAAVLAGAS................................................................................................................... 90
9 -4.480sp|Q9NQT8|KI13B_HUMAN Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF13B PE=1 SV=1  ali   23  7...........................................................................................................TLTEERNAVMVPSAG---------------------SGIPGAPAEWTPVP---GMETHIPVIFLDLNADDFSSQDNLDDPEAGGWDATL......................................... 71
10 -4.400sp|Q8IZC4|RTKN2_HUMAN Rhotekin-2 OS=Homo sapiens GN=RTKN2 PE=2 SV=1  ali   12  20...............................IAISDIRIPLMWKDSDHFSNKERSRRYAIFCLFKMGANVFDTDVVNVDKTITDICFENVTI-------FNEAGPDFQIKVEVYSCCTEE..................................................................................................................... 101

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Dunbrack RL Jr, Dunker K, Godzik A. Protein structure prediction in biology and medicine. Pac Symp Biocomput. 2000;(12):93-4.