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Query: [S] COG2311 Predicted membrane protein, from COG1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAITPRDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLFWDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRAWTPDASAILYEKYWKLHGGVEAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPFQAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTTLFYHLGLFMHFDRLELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGPAISKTSRLast
1 -7.670sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1  ali   11  2........................................................................................................................................................................................................................................................................................FITLTVKGAGSSEINCNMNDFQDNRQLYYENFIYIAATYTFSGLQEGTGRPVASNKAITCAELVLDVSPKTQRVILKKKEPGKRSQLWR................ 90
2 -5.590sp|Q5VZ52|MORN5_HUMAN MORN repeat-containing protein 5 OS=Homo sapiens GN=MORN5 PE=2 SV=1  ali   16  1........................................................................................................................................................................................................................................................................................................ILNGLKPAGMAQLTNMDPPRKIPKGYYCGDGFYNPVTRVVKDYRNRFLRNADDDEHEWITRTCRKG....................... 67
3 -5.440sp|A1A5B4|ANO9_HUMAN Anoctamin-9 OS=Homo sapiens GN=ANO9 PE=2 SV=2  ali   15  114............................................................................................................................................................................................................................................................................................................VTTSLRIRIVNFVVMNNKTS--------FEDLMKDGVFEARFPLHKGEGRLKKTWAR-FREQPVD.................... 177
4 -5.130sp|O00237|RN103_HUMAN E3 ubiquitin-protein ligase RNF103 OS=Homo sapiens GN=RNF103 PE=1 SV=1  ali   21  23........................................................................................................................................................................................................................................................................................................................SLWDWYTSYLFHPIASFQNFPVESDWDEDPDLFLERLAFPDLWLH-----PTDYIWR................ 82
5 -5.040sp|Q8IYD8|FANCM_HUMAN Fanconi anemia group M protein OS=Homo sapiens GN=FANCM PE=1 SV=2  ali   19  1.......................................................IFDCS-RDLFSVTFDLGFCSPDSDDEI............................................................................................................................................................................................................................................................................................................... 26
6 -4.850sp|Q9H0C3|TM117_HUMAN Transmembrane protein 117 OS=Homo sapiens GN=TMEM117 PE=2 SV=1  ali   20  15.............................................................................................MGIRNESFMWMGDFVTAWMVTDMML........................................................................................................................................................................................................................................................................... 46
7 -4.760sp|A2RRH5|WDR27_HUMAN WD repeat-containing protein 27 OS=Homo sapiens GN=WDR27 PE=2 SV=3  ali   22  1................GLFVFNLANLEVEAALYYKDFQSLSILLAGSCA--LRNRTADQKVLCLLASLFGGKIAVL..................................................................................................................................................................................................................................................................................................................... 58
8 -4.570tr|B7Z676|B7Z676_HUMAN Uncharacterized protein OS=Homo sapiens GN=SLC9B2 PE=2 SV=1  ali   19  10PHGLLDRVITNGMLLAGFLIRNIPVINDNVQIKHKWSSS--------------------RSIALSIILVRAGLGLDSKALKKLKGV----CVRLSMGPCIVEACTSALLAHYLLGL............................................................................................................................................................................................................................................................................. 102
9 -4.520sp|C9JH25|PRRT4_HUMAN Proline-rich transmembrane protein 4 OS=Homo sapiens GN=PRRT4 PE=2 SV=1  ali   15  18..........................................................................................................................................................................................................................................................................................................ESWRRAARTAPVAGTFGLLSGALQGYELGYGGQSGLEGPW--------------PWWAFQLGLRLGEVGV-PLALLGLYPALCSPRV 95
10 -4.470sp|Q8WWZ4|ABCAA_HUMAN ATP-binding cassette sub-family A member 10 OS=Homo sapiens GN=ABCA10 PE=1 SV=3  ali   14  1MNKMALASFMKGRTVIGT-----------------PDEETMDIELPKKYHEMVGVIFSDTF---YRLKFNWGYRIPVIKEHSEYTEHCWAMHGEIFCYLAKYWLK---------GFVAF.......................................................................................................................................................................................................................................................................... 91
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 2 6 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.