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Query: [S] COG2855 Predicted membrane protein, from COG1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGFSALTLAILLGMVLGNTIYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGISGIIIDVLTLSSTFLLACFLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEASKVTVAVATVVIFGTVAIFLYPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAISPDAENAAVISKMLRVMMLAPFLILLAARVKQLSGANSGEKSKITIPWFAILFIVVAIFNSFHLLPQSVVNMLVTLDTFLLAMAMAALGLTTHVSALKKAGAKPLLMALVLFAWLIVGGGAINYVIQSVIALast
1 -7.560tr|B7Z676|B7Z676_HUMAN Uncharacterized protein OS=Homo sapiens GN=SLC9B2 PE=2 SV=1  ali   9  11......................................HGLLDRVITNGMLLAGFLIRNIPVINDNVQIKHKW---SSSLRSIALSIIGLGLDSKALKKLKGVCVRLSMGPCIVEACTSALLAHYLLGLP........................................................................................................................................................................................................................... 103
2 -6.740sp|Q9BZV3|IMPG2_HUMAN Interphotoreceptor matrix proteoglycan 2 OS=Homo sapiens GN=IMPG2 PE=1 SV=3  ali   20  2................................................................................................................................IRRRRSILFPNGVKICPDESV---AEAVANHVKYFKVRVCQEAVWEAFRTFWLP----------GREEYHYWMNLCEDGVTSIFEMGTNFSESVEHRSLIMKKLT.................................................................................................................... 95
3 -5.940sp|P78312|F193A_HUMAN Protein FAM193A OS=Homo sapiens GN=FAM193A PE=1 SV=2  ali   18  1.........................................................................................................................................TCECHVCKQEASGLTPSAMTAGALPPGHQFLSPEKPTHPALHLYPHIHGHVPLHTVPHLPRPLIHPTLYATP............................................................................................................................................ 72
4 -5.290sp|Q8IUB5|WFD13_HUMAN Protein WFDC13 OS=Homo sapiens GN=WFDC13 PE=2 SV=1  ali   13  24...........................................................................................................................THLCTMQEDCEKGFQCCSSFCGIVCSSETFQKRNRIKHKGSEVIMP.................................................................................................................................................................................... 69
5 -4.500tr|E9PND1|E9PND1_HUMAN Uncharacterized protein OS=Homo sapiens GN=BAI2 PE=4 SV=1  ali   15  20...............................................................................................................................KFSAHDWHLHAQGHAICNAHGKG------KGHRMTPACPLLLSVILSLRLATAFDPAPSACSALASGVLYGAFSLQDLFPTIASGCSWTLENPDPTKYSLYLRFNR.................................................................................................................... 119
6 -4.470sp|Q17R60|IMPG1_HUMAN Interphotoreceptor matrix proteoglycan 1 OS=Homo sapiens GN=IMPG1 PE=1 SV=2  ali   13  9..................................................................................................................................TKRSAFFPTGVKVCPQESM---KQILDSLQAYYRLRVCQEAVWEAYRIFLIP----------DTGEYQDWVSICQQETFCLFDIGK..................................................................................................................................... 83
7 -4.470sp|Q9Y5W7|SNX14_HUMAN Sorting nexin-14 OS=Homo sapiens GN=SNX14 PE=1 SV=3  ali   13  3.....................................................................................................................IFFTIKYKPKQLGLQELFPQGHSCAVCGKVKCKRHRPSLLLENYQPWLDLKI.................................................................................................................................................................................... 54
8 -4.470tr|D6RDH9|D6RDH9_HUMAN Uncharacterized protein OS=Homo sapiens GN=SNX14 PE=4 SV=1  ali   13  3.....................................................................................................................IFFTIKYKPKQLGLQELFPQGHSCAVCGKVKCKRHRPSLLLENYQPWLDLKI.................................................................................................................................................................................... 54
9 -4.300sp|Q8N0X7|SPG20_HUMAN Spartin OS=Homo sapiens GN=SPG20 PE=1 SV=1  ali   8  1..........................................................................................................................ADELILIPNGVQIFFVNPAGEVSAPSYPGYLRIVRFLDNSLDTVLNRPPGFLQVCDWLYPLVPDRSPVLKCTAGAYMFPDTMLQAAGCFVGV....................................................................................................................................... 92
10 -4.190sp|Q9H195|MUC3B_HUMAN Mucin-3B (Fragment) OS=Homo sapiens GN=MUC3B PE=2 SV=1  ali   8  25................................................................................................................................................................................................DEEVVGTFSNWGFEDDGTDKDTNFHVALENVDTTMKVHIKRPEMTSSSV............................................................................................................ 73
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.