current user: public

If you have questions about the server, please let us know.

Query: [R] COG4015 Predicted dinucleotide-utilizing enzyme of the ThiF/HesA family, from COG1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .
# Score Template Links and tools%idFirst MAVILLEISELEGKKAPRGEVTLVGAGRLGLRTALNLMQIHRGGPERINVIDGQRVSADDLIFRLMGATPGEYKVKFIESLATPGFSRTVRGIPEYIDRDNLHLLRGDVVCVEIAGGDTLPVTAEIIKYAQKRGSATISTMGVFGIGEEEVNAISIEEADPGNPIVEYLLDEGVTDHLLVGTGKLIRDWEPVTPYVLDRVSEVMTAEILKLLRRKLGLast
1 -6.230sp|Q8N9W5|CS051_HUMAN UPF0470 protein C19orf51 OS=Homo sapiens GN=C19orf51 PE=2 SV=3  ali   12  38.........ADTVHSNPELDVLLLGSVDG--HLLRTLSRAKFWPRRRFNFFVLE-NNLEAVARHMLIFSLKMGLQERSETFLEVWGNALLRPPVAAFVRAQADLLAH.............................................................................................................. 139
2 -4.800sp|Q14186|TFDP1_HUMAN Transcription factor Dp-1 OS=Homo sapiens GN=TFDP1 PE=1 SV=1  ali   12  5.......................AGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQQVVIGTPQ.................................................................................................................................. 68
3 -4.710tr|E7EWK8|E7EWK8_HUMAN Uncharacterized protein OS=Homo sapiens GN=PLOD1 PE=4 SV=2  ali   15  8.............................................DNLLVLTVATKETEGFRRFKRSAQFFNYKIQALEKGTSAGGGQKVRLLKKALEKHADKE---DLVILFADSYDVLSGPRELLKKFRQARSQVVFSA............................................................................ 110
4 -4.540sp|Q8TDX9|PK1L1_HUMAN Polycystic kidney disease protein 1-like 1 OS=Homo sapiens GN=PKD1L1 PE=2 SV=1  ali   114..........................SDPSNLGYELISAFVTKGVYMLKAVIYNEFHGTEVELGPYYVEIGHEAVSAFMNSSSVHEDEVLVFADSQVNQKSTVVI-IPSYNVSFISQTQVGDSQAWHSMTVWYKMQSVS.............................................................................. 230
5 -4.280sp|Q8TDY2|RBCC1_HUMAN RB1-inducible coiled-coil protein 1 OS=Homo sapiens GN=RB1CC1 PE=1 SV=3  ali   25..................................................FDFETIPHPNIEQTIHQVSLDSPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDS.................................................................................................. 99
6 -3.830sp|Q8IXP5|CK053_HUMAN Uncharacterized protein C11orf53 OS=Homo sapiens GN=C11orf53 PE=2 SV=1  ali   10  3.............................GSPVTSGYYGVRRS------LSDSDFHNSKQFSNDVYTSSVGKP................................................................................................................................................ 41
7 -3.690sp|Q5TKA1|LIN9_HUMAN Protein lin-9 homolog OS=Homo sapiens GN=LIN9 PE=1 SV=1  ali   2.........................LGGFPVEFLIQVTRLSKI-IKKLREMN-TEAEKLKSYSMPISIEFQRRYATIVLELEQLNKDLN................................................................................................................................ 70
8 -3.680tr|B4DM89|B4DM89_HUMAN Uncharacterized protein OS=Homo sapiens GN=BSDC1 PE=2 SV=1  ali   13  6........................DVGWWRSWLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLATEGSSGATEKM-----KKGLSDFLGVISDTFAPSPDKTIDCDVIT.......................................................................................... 103
9 -3.680sp|Q9NW68|BSDC1_HUMAN BSD domain-containing protein 1 OS=Homo sapiens GN=BSDC1 PE=2 SV=1  ali   13  6........................DVGWWRSWLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLATEGSSGATEKM-----KKGLSDFLGVISDTFAPSPDKTIDCDVIT.......................................................................................... 103
10 -3.630sp|Q5NDL2|AER61_HUMAN Uncharacterized glycosyltransferase AER61 OS=Homo sapiens GN=AER61 PE=2 SV=1  ali   11  3....YRELGFLDQLRITHNTDIFIGMHGAGLTHLLFL----PDWAAVFELYNCED-DLARLRGVHYITWRRQNKVFPQDKGHHPTLGEHPKFTNYSFDVEEFMYLVLQAADHVLQ...................................................................................................... 113

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 5 1 8   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Lukasz Jaroszewski, Zhanwen Li, S. Sri Krishna, Constantina Bakolitsa, John Wooley, Ashley M. Deacon, Ian A. Wilson, Adam Godzik, Exploration of Uncharted Regions of the Protein Universe. Plos Biology. 2009 Sep. 7(9):e1000205