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Query: [C] COG4074 H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase, from COG1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIDMKLAILGAGCYRTHAASGITNFSRACEVAEMVGKPEIAMTHSTITMGAELKELAGVDEVVVADPVFDNQFTVIDDFAYEDVIEAHKEDPEKIMPQIREKVNEVAKELPKPPEGAIHFTHPEDLGFEITTDDREAVADADFIMTWFPKGDMQPGIIDKFIDDIKPGAIVTHACTIPTTKFYKIFEEKHGDLVTKPETLNVTSYHPGAVPEMKGQVYIAEGYASEEAINTLFELGQKARGNAYRLPAELLGPVCDMCSALTAITYAGILSYRDSVTQVLGAPAGFAQMMAKESLEQITALMEKVGIDKMEEHLDPGALLGTADSMNFGASADILPTVFEILEKRKKLast
1 -4.940sp|Q5T3F8|TM63B_HUMAN Transmembrane protein 63B OS=Homo sapiens GN=TMEM63B PE=1 SV=1  ali   13  9......................................................................................................................................EDDLVKRTLFINGISKYAESEKIKKHFEEAYPNCTVLEARPCYNVARLMFLDAERKKAERGKLYFTNLQNVPTMINPKPCGHLCCCVVRGCEEAIEYYTKLEQKLKEDYKREKEKVNEKPLGM.......................................................................................... 136
2 -4.410sp|Q8N412|CD037_HUMAN Uncharacterized protein C4orf37 OS=Homo sapiens GN=C4orf37 PE=2 SV=1  ali   18  1MYDRALKLAEGGSTEAHVGPGSYQVPFLKQQATGSNAPFLSLTARESTFTIASSIEKAV................................................................................................................................................................................................................................................................................................ 62
3 -4.360sp|A6NCN2|KT81L_HUMAN Keratin-81-like protein OS=Homo sapiens PE=2 SV=3  ali   17  1........MSCLYSRLSAPCGVRAFSCISACGPRPGR--CCITAAPYRGVSCYRGLTGGFGS............................................................................................................................................................................................................................................................................................. 52
4 -4.290tr|A6NNV8|A6NNV8_HUMAN Uncharacterized protein OS=Homo sapiens GN=B3GALNT2 PE=4 SV=3  ali   12  12RVLYPIVITSLGVFYDANDVGF---QRNITVKLYQAEQEEALFIARFSPPSCGVQVNKLWYKPVEQFILPESFEGTI.............................................................................................................................................................................................................................................................................. 85
5 -4.270sp|Q8TB22|SPT20_HUMAN Spermatogenesis-associated protein 20 OS=Homo sapiens GN=SPATA20 PE=2 SV=3  ali   7  21.............................................................................................................................................QIVICGDRQAKDTKALVQCVHSVYIPNKVLILADGDPSSFLSRQLPFLSTLRRLEDQATAYVCENPITDPC....................................................................................................................................... 96
6 -4.240sp|P78385|KRT83_HUMAN Keratin, type II cuticular Hb3 OS=Homo sapiens GN=KRT83 PE=1 SV=2  ali   13  1........MTCGFNSIGCGFRPGNFSCVSACGPRPSR--CCITAAPYRGISCYRGLTGGFGS............................................................................................................................................................................................................................................................................................. 52
7 -4.170sp|Q12968|NFAC3_HUMAN Nuclear factor of activated T-cells, cytoplasmic 3 OS=Homo sapiens GN=NFATC3 PE=1 SV=1  ali   12  22.MQTNVVYNGPTCLPINAASS-QEFDSVLFQQDATLSGLVNLGCQPLSSIPFHSSNSGSTGHLLAHT........................................................................................................................................................................................................................................................................................ 86
8 -3.900sp|O75143|ATG13_HUMAN Autophagy-related protein 13 OS=Homo sapiens GN=ATG13 PE=1 SV=1  ali   18  1MIDFKPAFSKDD----ILPMDLGTFYREFQNPPQLSSLSIDIGAQSMA........................................................................................................................................................................................................................................................................................................... 44
9 -3.740sp|Q96LM5|CD045_HUMAN Uncharacterized protein C4orf45 OS=Homo sapiens GN=C4orf45 PE=2 SV=3  ali   7  28..DYLPKIVGEQHLALEKTGDLRYLWRPASNRSLPAKYKHEY--------------VSEIGWRIPQYNLGSGFHIKYEELSQASLDS.................................................................................................................................................................................................................................................................... 110
10 -3.740sp|Q5THK1|PR14L_HUMAN Protein PRR14L OS=Homo sapiens GN=PRR14L PE=1 SV=1  ali   15  18.LHTLLALCSPGCYRISFSSHMPTMQRL--FMTQFTQGLKGLRSPASIADKVFCSLPYSVGRVLS.......................................................................................................................................................................................................................................................................................... 84
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 3 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.