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Query: [S] COG4241 Predicted membrane protein, from COG1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MYQTRPLTEGAVFASLFAVLFVITFFVPFIAFITMWFLPIPFLLYTLRHGLKPAVIVLLVASVVVMLILGPLLLLLALLFGTSGVVMGELYRREKSPFAVLLGGSLSNIAWVLLLFISSIVIMDVNPLVAAQETMRQSMQTAEQLIIGLGQEPSEALKQMEESINQLFYLGPAMVVICGTLLAAVTQLVAAPILKRLRHEVKPLPPFRTWSFPRSFLFYYLAVVVLFMIGFEEGSMPYIAVWNLLPVLEIIMAIQGFAVIFAYFHTKGVAKAVPVIIMILCIIVTPLLYLVRIIGIIDLGFDLRKRMGSQGKLast
1 -6.490sp|Q9HAT1|LMA1L_HUMAN Protein ERGIC-53-like OS=Homo sapiens GN=LMAN1L PE=2 SV=2  ali   13  6......................................................................................................................................................................................................................................................IFLFYLLIQTVGFFGYVHFRQELNKSLQECLSTGSLPLGPAPHTPRALGIL............... 56
2 -5.930sp|Q96L92|SNX27_HUMAN Sorting nexin-27 OS=Homo sapiens GN=SNX27 PE=1 SV=2  ali   13  10..............................................................................................................................................................................................................................................................EGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVF..................... 46
3 -4.750sp|C9JH25|PRRT4_HUMAN Proline-rich transmembrane protein 4 OS=Homo sapiens GN=PRRT4 PE=2 SV=1  ali   19  18.ESWRRAARTAPVAGTFGLLSGALQGYEVLHALGYG-LEGPWPWWAFQLGLR--LGEVGVALPLALLGLYPA................................................................................................................................................................................................................................................ 89
4 -4.340sp|Q14693|LPIN1_HUMAN Phosphatidate phosphatase LPIN1 OS=Homo sapiens GN=LPIN1 PE=2 SV=2  ali   9  39VDNPAIIDDPNLVVKIGSKYYNWTTAAPLLLAMQAFQKPLP............................................................................................................................................................................................................................................................................... 79
5 -4.320tr|E9PAQ4|E9PAQ4_HUMAN Uncharacterized protein OS=Homo sapiens GN=C14orf80 PE=4 SV=1  ali   12  1MGRRRQRVDPAAGARAGALPEAIAALSRSLPSGPS-----PEIFRRAKFDRPEATSALWQLL-VLSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQGSRELLLALSWLLARGPVPEQMLAQARVPLGDEMTVCQHMEAEGPVDVRHVQWLMGKLRFRWRQLVSSQQEQCALLSKIHLQQLLRTLERENQRLEAVLAWRRSELVFWRWMDTVL....................................................................................... 261
6 -4.130sp|Q9BQK8|LPIN3_HUMAN Phosphatidate phosphatase LPIN3 OS=Homo sapiens GN=LPIN3 PE=1 SV=3  ali   9  33TKNPGLLDDPNLVVKINGKHYNWAVAAPMILSLQAFQKNLP............................................................................................................................................................................................................................................................................... 73
7 -4.060sp|Q9P2E2|KIF17_HUMAN Kinesin-like protein KIF17 OS=Homo sapiens GN=KIF17 PE=1 SV=3  ali   8  15...............................................................................................................................VRAKSKLLEKMQRKLRAAEVEIKDLQSEFQLEKIDYLATIRRQERDSMLLQQLLEQVQ---CNYSNLEKILRESCWDEDNGFWKIPHPVI............................................................................................... 107
8 -3.990sp|O95870|ABHGA_HUMAN Abhydrolase domain-containing protein 16A OS=Homo sapiens GN=ABHD16A PE=1 SV=3  ali   11  1........................................................................................................................................SSQLEEASIYSRWEVEEDWCLSVLRSYQAEHGPDFPWSV-MSADGRRQLALFLARKHLHNFEATHCTPLPAQNFQMPWHL................................................................................................ 82
9 -3.960tr|C9JZD4|C9JZD4_HUMAN Uncharacterized protein OS=Homo sapiens GN=C14orf80 PE=4 SV=1  ali   12  1MGRRRQRVDPAAGARAGALPEAIAALSRSLPSGPS-----PEIFRRAKFDRPEATSALWQLL-VLSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQGSRELLLALSWLLARGPVPEQMLAQARVPLGDEMTVCQIHLYTRGCHSDQSLSHLSVTEAEM------------LRDPEGGQQLLRTLERENQRLEAVLAWRRSELVFWRWMDTVL....................................................................................... 209
10 -3.760sp|Q92539|LPIN2_HUMAN Phosphatidate phosphatase LPIN2 OS=Homo sapiens GN=LPIN2 PE=1 SV=1  ali   7  36AENPGLIDNPNLVIRIYNRYYNWALAAPMILSLQVFQKSLP............................................................................................................................................................................................................................................................................... 76
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 2 6 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.