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Query: [S] COG5427 Uncharacterized membrane protein, from COG1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEFGVVARWWVFFGVLLVAGLPVASRLLPDAPDRGASVAMPLSLVVVTLATLWVGQVAYGQLVVGGVFVAVLAAAAWLARGGVEIPRKPLLEVVGVFTVAFVFLIVVRAWADGVQPAGGEQFLDFGLLQALDRAGQLPPRDMWFAGERVVYYYGGQLMASIGAHLTDTAPRFAYEPALAGVYAMGCTAAYGLASTIAAGNGGESRPVGVPTAIGGAGVALAVVVLATGVNWLVVAVPAAAAAVVVTRPRRVRAGVLGAFAFGFASNLGPVIRLLAARVDVVRAAVVAAGINADRRPAITPEAFDMWHASRFMETGLNEFPLFAYLNGDLHAHMVSVPVLFVAVAVGVAYYRTPARQRRRRWALLWGGFPVAGAAILTVNTWSLPTVFGVAALAVALADPAPATLLPTGVQRWTRRESAVGQSVQRVLLAVGVAAVGGVLAVVIAWPFVQNVLLAGASNQHLAVLPVPSQAGALVFVHGLFLAAFGAYFVSRVATSVAGWVVAAAAAGAAVAVAVAVGPVVGGVGITAVVLVGPVLGAAWWLRRRNAAGVECVLVAAGAGLVVLVEYVYLADAASYERFNTVFKVYAQVWALWSVAGGVALAGVSERRASTGGLGAVFVVGLVVAASVYGGLAVTTHAANADDASLDALEYAGNAHPGEAAAARWLGDRRRGTRIVAAPGVDPYTWQNPAASLSGVPTVAGWAHAANYHSQAAWEQRVDDIGVVYETTDAASRAAILEKYDVTYVWVGPVERARYEIPDLSADPGIEPVHRTPAVTIYRVTDDELVAPRSGPITVTTTPQAATATAPGAQTARSPARFVTVTSSASTAVTSSQWGTKLRFSLast
1 -5.230tr|F5H5G4|F5H5G4_HUMAN Uncharacterized protein OS=Homo sapiens GN=WBP11 PE=4 SV=1  ali   11  1.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................RLYEKENPDIYKE-LRKLEVEY------EQKR-----AQLSQYFDAVKPSEVMMMMFLLRTWIKISMMTVLMTVTPTNQMEKVTGMNLCTVIMVRETTMKKRSQV.............. 101
2 -4.490sp|A6NGY3|CE052_HUMAN Uncharacterized protein C5orf52 OS=Homo sapiens GN=C5orf52 PE=2 SV=2  ali   8  6.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ICFPRPRSAQQPVLFSLMNSSEAAMKKTLPKSHLSRVI---------HDNRITQRIYEMEVSALEKTKKKISHYYEHLKKKFMTEQLRKLGRWREESVNSNRYLTF......................................................................... 103
3 -4.150tr|C9J7R7|C9J7R7_HUMAN Uncharacterized protein OS=Homo sapiens GN=DNTTIP1 PE=4 SV=1  ali   10  2......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................KWDPARLNESTTFVLG--------SRANKALGMGGTRG-KHPHLFKYAADPQDKHWLAEQHHMRATGGKMAYLLIEEDIRDL----AASDDYRGCLDLKLEELK--FVLPSWMVEKMRKYMETLRTENEHRAVEAPPQT....................................... 130
4 -4.150sp|Q9H147|TDIF1_HUMAN Deoxynucleotidyltransferase terminal-interacting protein 1 OS=Homo sapiens GN=DNTTIP1 PE=1 SV=2  ali   10  2......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................KWDPARLNESTTFVLG--------SRANKALGMGGTRG-KHPHLFKYAADPQDKHWLAEQHHMRATGGKMAYLLIEEDIRDL----AASDDYRGCLDLKLEELK--FVLPSWMVEKMRKYMETLRTENEHRAVEAPPQT....................................... 130
5 -4.060sp|P35556|FBN2_HUMAN Fibrillin-2 OS=Homo sapiens GN=FBN2 PE=1 SV=3  ali   8  25............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................DSPVNMKFNLSHLGSKEHILENNHIRYVISQGNDDSVFRIHQRNGLSYLHTAKKKLMPGTYTLEITSIPLYKKKELKKLEESNEDDYLLGELGEALRMRLQIQL.................... 136
6 -3.910sp|Q14667|K0100_HUMAN UPF0378 protein KIAA0100 OS=Homo sapiens GN=KIAA0100 PE=1 SV=3  ali   6  12............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FTEEESGMSDQLCGIAACQTDDIYNRNCLIELVNCQMVLRGAETEGC-----VIVSAAKAQLLQCQHHPAWYGDTLKQKTS-DGMQYFATTESSPTEQ---DGRQLWLEVKNIEEH-----RQRSLDSVQELMESGQ-AVGGMVTTTTDWNQPAEAQQAQQVQ......................................... 164
7 -3.870tr|Q5QPA5|Q5QPA5_HUMAN Mitochondrial ribosomal protein S18A (Fragment) OS=Homo sapiens GN=MRPS18A PE=2 SV=2  ali   13  32.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................DIRSVNYTHHPMPTFPLPWAFPLAPSELQRELQRLSPLPRHSG-PNHRPRLPEGVVPKSKPQLNRYLTRWAPGSVKPIYKKWNRVRMPVGSRDNVCYSRT................................................................................... 138
8 -3.850tr|F8W9Q8|F8W9Q8_HUMAN Uncharacterized protein OS=Homo sapiens GN=ADCK1 PE=4 SV=1  ali   8  32.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NDFGAVRVGRAVATTAVISYDYLTSLKSVPYGSEEYLQLRSKVHLRSARRLCELCCANRGTFIKVGQHLGALDYLLPEEYTSTLKVLHSQAPQSSMQ.............................................................. 128
9 -3.780sp|Q86XN7|PRSR1_HUMAN Proline and serine-rich protein 1 OS=Homo sapiens GN=PROSER1 PE=1 SV=2  ali   5  1....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MDKKSFEMVL--DEIRKAVLTEYKLK----AIEYVHGYFSSEQVVDLLRYFS-----------------EPQLKAMKALQHAVQPTEVVNILNCFTLELLASNIIDAQNS----RPIEDLFRVNMSEKKRCKRILEQAFKGGCKAPHAMISSCGTIPGNPYPKGRPSRINGIFPGTPLKKD............... 167
10 -3.670sp|Q93073|SBP2L_HUMAN Selenocysteine insertion sequence-binding protein 2-like OS=Homo sapiens GN=SECISBP2L PE=2 SV=3  ali   9  1........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MDRAPTEQNVKLSAEVEPFIPQKKSPDTFMIPMALPNDNGSVSGVEPTPIPSYLITCYPFVQENQSNRQFPLYNNDIRWQQPNPNPTGPYFAYPII---------SAQPPVSTEYTYYQLMPAPCAQVMGFYHPFPTPYSNTFQAANTVNAITTECTE.................. 149
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.