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Query: [E] KOG0068 D-3-phosphoglycerate dehydrogenase, D-isomer-specific 2-hydroxy acid dehydrogenase superfamily, from COG1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAFSSSCSSVKAVNSRWTSPSPSPSSRFAVLPAFLHRRYATSVKLTAISAALKTVEQTTLTEDNRFSTVGSDSDEYNPTLPKPRILVTEKLGEAGVNLLREFGDVDCSYDLSPEDLKKKVAESDALIVRSGTKVTREVFEAAKGRLKVVGRAGVGIDNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARNVAQADASIKAGKWERSKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMTVISHDPYAPADRARALGVDLVSFDQAISTADFVSLHMPLTPATKKVFNDETFSKMKKGVRLINVARGGVIDEDALVRALDAGIVAQAALDVFCEEPPSKDSRLIQHENVTVTPHLGASTKEAQEGVAIEIAEAVAGALKGELSATAVNAPMVAPEVLSELTPYIVLAEKLGRLAVQLASGGKGVQSIRVVYRSARDRDDLDTRLLRAMITKGIIEPISDSYVNLVNADFIAKQKGLRISEERMVVDSSPEYPVDSIQVQILNVESNFAGAVSDAGDISIEGKVKYGVPHLTCVGSFGVDVSLEGNLILCRQVDQPGMIGQVGNILGEQNVNVNFMSVGRTVLRKQAIMAIGVDEEPDNKTLERIGGVSAIEEFVFLKLLast
1 -4.390tr|B4DQ88|B4DQ88_HUMAN Uncharacterized protein OS=Homo sapiens GN=EMR2 PE=2 SV=1  ali   13  48.................................................................................................................DELLEAPGDLETLPRLQQHCVASHLLDGLEDVLRGLSKN--GLLNFSYPAGTELSLEVQKQVDRSVTLRQNQAVMQL-----------------DWNQAQKSGDPVSDPETGALCLLGAWPE..................................................................................................................................................................................................................................................................................................................................................................................................... 154
2 -4.310sp|Q9UBI9|HDC_HUMAN Headcase protein homolog OS=Homo sapiens GN=HECA PE=1 SV=1  ali   11  24............................................................................................................................................................DYQKVVCNNEHCPCSTWMHLQCFYEWESSILVQFNCIGRARSWNEKQCRQNMWTKK---GYDLAFRFCSCCGQGHLKKDT.................................................................................................................................................................................................................................................................................................................................................................................................... 101
3 -4.170sp|P21817|RYR1_HUMAN Ryanodine receptor 1 OS=Homo sapiens GN=RYR1 PE=1 SV=3  ali   15  12.........................................................................................................................................................................................................QMLMPVSWSR-------MPNHFLQV--------ETRRAGERLGWAVQCQEPLTMMALHIPEENRCMDILELSERLDLQRFHS----HTLRLYR----AVCALGNNRVAHALCSHVDQAQLLHALEDAHLPGPLRAGY---------------DLLISIHLESACRSRRSMLSEYIV....................................................................................................................................................................................................................................................... 150
4 -3.980sp|Q15413|RYR3_HUMAN Ryanodine receptor 3 OS=Homo sapiens GN=RYR3 PE=1 SV=3  ali   11  1................................................................................................................................................................................................LKNAMPLSAAIFRSEEKNPVPQCPPRLDVQTIQPVLWSRMPNSTERVSERHGWVVQCLEPLQMMALHIPEENRCVDILELCEQEDLMRFHY----HTLRLYS----AVCALGNSRVAYALCSHVDLSQLFYAIDNKYLPGLLRSGF---------------DLLISIHL-----ASAKERKLMMKNEYIIPITSTTRNIRLFPDESKRHGLPGVGLRTCL.................................................................................................................................................................................................................... 198
5 -3.890sp|A6NHR9|SMHD1_HUMAN Structural maintenance of chromosomes flexible hinge domain-containing protein 1 OS=Homo sapiens GN=SMCHD1 PE=1 SV=2  ali   12  1.....................................................................................................................................................................................................................................................TVYLFDRREKESELGDRPLQVGERSDYAGFRACV---------------CQTLGISPEEKFVITTTSRKEITCDNFDETVKDGVT------LYLLQSVNQLLLTATKERIDFLPHYDTLVKSGMYE............................................................................................................................................................................................................................................................. 105
6 -3.840sp|Q92576|PHF3_HUMAN PHD finger protein 3 OS=Homo sapiens GN=PHF3 PE=1 SV=3  ali   12  19...................................................................................ALFLGSNLENEVCE------DFSASQNVLEDSLKNMLSDKDPMLGSASNQFCLPVLDSNDPNFQMPCSTVVGLDDIMDEGVVKES........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 97
7 -3.810sp|Q8WV92|MITD1_HUMAN MIT domain-containing protein 1 OS=Homo sapiens GN=MITD1 PE=1 SV=1  ali   13  12.....................................................................................................................................................................................................................................................EVWIEDPYIRHTHQLYNFLRFCEM-KRPCKVKTIHLLTSLDEGIEQVQQSRGLQEIEE-----SLRSHGVLLEVQYSSSIHDREIRGRGLDYFKKPQ.......................................................................................................................................................................................................................................................................................... 113
8 -3.750sp|Q9NT68|TEN2_HUMAN Teneurin-2 OS=Homo sapiens GN=ODZ2 PE=1 SV=3  ali   11  51...........................................................................................................................GQNPIVPETQVLHEEIELPGSNVKLRYLS-------SRTAGYKSLLKITMTQSTVPLNLIRVHLMVAVEFQKSFQASPNLAYTFIWDKTDAYGQRVYGLSDAVVSVG.......................................................................................................................................................................................................................................................................................................................................................................................................... 153
9 -3.680sp|Q9P273|TEN3_HUMAN Teneurin-3 OS=Homo sapiens GN=ODZ3 PE=2 SV=3  ali   10  54...........................................................................................................................EDSPIIPETQVLHEETTIPGTDLKLSYLS-------SRAAGYKSVLKITMTQSIIPFNLMKVHLMVAVVFQKWFPASPNLAYTFIWDKTDAYNQKVYGLSEAVVSVG.......................................................................................................................................................................................................................................................................................................................................................................................................... 156
10 -3.600sp|Q9HCC9|LST2_HUMAN Lateral signaling target protein 2 homolog OS=Homo sapiens GN=ZFYVE28 PE=1 SV=3  ali   14  1.................................................................................................MMNRFRKWLYKPKRSDPQLLARFYYADEELNQVAAEL----------------------DSLDGRKDPQRCTLLVS----QFRSCQDNVLNIINQIMDECIPQDRAPRDDNLAGQLWFGAECLAAGSIIMNRELESMAMRPLAKELTRSLEDVRGALRDQALRDLNTYTEKMREALRHFDFAEFELSYVSAMVPVKSPREYYVQQEVIVLFC---------ETVERALDFGYLTQDMIDDY--EPA-----------MFSIPRLA-------------IVCGLVVY-----ADGPLNLDRKVEDMSELFRPFHTLLRKI................................................................................................................................................................................................................ 267
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 2 6 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.