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Query: [U] KOG1162 Predicted small molecule transporter, from COG1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MVKFSKELEAQLIPEWKEAFVNYCLLKKQIKKIKTSRKPKPASHYPIGHHSDFGRSLFDPVRKLARTFSDKLFSNSEKPEILQVRRRRGSSETGDDVDEIYQTELVQLFSEEDEVKVFFARLDEELNKVNQFHKPKETEFLERGEILKKQLETLAELKQILSDRKKRNLSGSNSHRSFSSSVRNSDFSAGSPGELSEIQSETSRTDEIIEALERNGVSFINSATRSKTKGGKPKMSLRVDIPDAVAGAEGGIARSIATAMSVLWEELVNNPRSDFTNWKNIQSAEKKIRSAFVELYRGLGLLKTYSSLNMIAFTKIMKKFDKVAGQNASSTYLKVVKRSQFISSDKVVRLMDEVESIFTKHFANNDRKKAMKFLKPHQTKDSHMVTFFVGLFTGCFISLFVIYIILAHLSGIFTSSDQVSYLETVYPVFSVFALLSLHMFMYGCNLYMWKNTRINYTFIFEFAPNTALRYRDAFLMGTTFMTSVVAAMVIHLILRASGFSASQVDTIPGILLLIFICVLICPFNTFYRPTRFCFIRILRKIVCSPFYKVLMVDFFMGDQLTSQIPLLRHLETTGCYFLAQSFKTHEYNTCKNGRYYREFAYLISFLPYFWRAMQCVRRWWDESNPDHLINMGKYVSAMVAAGVRITYARENNDLWLTMVLVSSVVATIYQLYWDFVKDWGLLNPKSKNPWLRDNLVLRNKNFYYLSIALNLVLRVAWIETIMRFRVSPVQSHLLDFFLASLEVIRRGHWNFYSGELast
1 -18.500sp|Q9UBH6|XPR1_HUMAN Xenotropic and polytropic retrovirus receptor 1 OS=Homo sapiens GN=XPR1 PE=1 SV=1  ali   22  2........................................................................................................................................................................................................................................................................................................................................ADWRVAHVEVAPFYTCKKINQLISETEAVVTNELEDGDRQKAMKRLRVPPLGAAQPAPAWTT............................................................................................................................................................................................................................................................................................................................................................................. 63
2 -6.810sp|Q6P2Q9|PRP8_HUMAN Pre-mRNA-processing-splicing factor 8 OS=Homo sapiens GN=PRPF8 PE=1 SV=2  ali   17  9.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................QKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWDIQLRWGDYDSHDIERYARAKFL-DNMSIY-VLIAIDLAYNLNWFPGSKPLIQQAMAKIMKAALYVLRERIRK......... 148
3 -5.370sp|Q12874|SF3A3_HUMAN Splicing factor 3A subunit 3 OS=Homo sapiens GN=SF3A3 PE=1 SV=1  ali   14  35...................................................................................................................................................................................................................................................................................................LHDCYLKYINLKASEKLDYITYLSIFDQLFDIPKERKNAEYKRYLEMDYTDRVKPLNELFGKIQAEFEKKWENGT..................................................................................................................................................................................................................................................................................................................................................................................................... 118
4 -5.250sp|P52948|NUP98_HUMAN Nuclear pore complex protein Nup98-Nup96 OS=Homo sapiens GN=NUP98 PE=1 SV=4  ali   11  26LEDLAPPERSSLIQDWELVYLDYIRVIEMLRHIQQVDCSGNDLEQ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 73
5 -5.200sp|A6NE01|F186A_HUMAN Protein FAM186A OS=Homo sapiens GN=FAM186A PE=2 SV=3  ali   6  10...................................................................................................................................................................................................................................................................................VDVEAQKKNLILLNQAIKTHTMARTLIIEILHMDTVQLGYLFRKY-QHARNNIMKRLKAIQNTGKGYEARNLHMMLSRLDDYGKKVMQVTEKQKSLGQKRNQ.......................................................................................................................................................................................................................................................................................................................................................................................... 124
6 -5.050sp|Q92736|RYR2_HUMAN Ryanodine receptor 2 OS=Homo sapiens GN=RYR2 PE=1 SV=3  ali   10  2......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VEDVCPNIPSLEKLMEEIVELAESGQMPHVME-----------------------------VILPMLCSYMSRWWEHGPENNPERAEMCCTALNSE---------HMNTLLGNILKIIWMKRLAVFSQPIINKVLKTHFLPLMEKLKK......... 129
7 -5.040tr|F8W806|F8W806_HUMAN Uncharacterized protein OS=Homo sapiens GN=WDR52 PE=4 SV=1  ali   12  2.............................................................................................................................................................................................................................................................................................KLSDLHHVTLFQEILLLKNFEKQENILQERVNSLDKEEQYMQWKINETLKEMEEKKNEITKLQEQEKALYAGFQAAIGENNK.................................................................................................................................................................................................................................................................................................................................................................................................... 83
8 -4.860sp|Q96M60|CO033_HUMAN Uncharacterized protein C15orf33 OS=Homo sapiens GN=C15orf33 PE=2 SV=2  ali   11  8...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FKANELTQLPRHLDAEQIYLFILKAHNFDERVFKIWKTHFLSEASIALLHDSFW-----WWFLHKFRPDRENQDCLFDRISESYFFQIYPDCLAQAIYFHEAFPESSYLFNDEFKEDLGNNIFLWCSGLWKLKELS 163
9 -4.850tr|B1AP70|B1AP70_HUMAN Tubulin tyrosine ligase-like family, member 11 OS=Homo sapiens GN=TTLL11 PE=4 SV=1  ali   8  4................................................................................................................................................................................................................................................................................KQVFPKYAKQFNYLRLVDRMANLFIRFLGIKGTMKLGPTGFRTFIRSSSSSLSMAAVDILYIDITRRWNSMTLDLQAFVEAFFFLAQRKFKMLPLHEQVASL............................................................................................................................................................................................................................................................................................................................................................................................. 115
10 -4.820sp|Q14156|EFR3A_HUMAN Protein EFR3 homolog A OS=Homo sapiens GN=EFR3A PE=1 SV=2  ali   7  13............................................................................................................................................................................................................................................................................................RPRYKRLVDNIFTDMEKLTFYAVSAPEKLDRIGSYLAERLSRDVVRHRSGYVL.................................................................................................................................................................................................................................................................................................................................................................................................................................. 75
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 3 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.